RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 ODF3L1Q8IXM7 274 aa23.25■■□□□ 1.31
RAB40C-211ENST00000568586 OR51D1Q8NGF3 324 aa23.25■■□□□ 1.31
RAB40C-211ENST00000568586 OR8H1Q8NGG4 311 aa23.25■■□□□ 1.31
RAB40C-211ENST00000568586 FAM3DQ96BQ1 224 aa23.25■■□□□ 1.31
RAB40C-211ENST00000568586 ABHD14AQ9BUJ0 271 aa23.25■■□□□ 1.31
RAB40C-211ENST00000568586 TCRBV4S1A1TA0A5B7 111 aa23.24■■□□□ 1.31
RAB40C-211ENST00000568586 ZNF736B4DX44 427 aaPredicted RBP23.24■■□□□ 1.31
RAB40C-211ENST00000568586 RGS11O94810 467 aa23.24■■□□□ 1.31
RAB40C-211ENST00000568586 PPP1CCP36873 323 aaKnown RBP23.24■■□□□ 1.31
RAB40C-211ENST00000568586 MOB1BQ7L9L4 216 aa23.24■■□□□ 1.31
RAB40C-211ENST00000568586 Q8N9W7 124 aa23.24■■□□□ 1.31
RAB40C-211ENST00000568586 WFDC9Q8NEX5 89 aa23.24■■□□□ 1.31
RAB40C-211ENST00000568586 LIN7CQ9NUP9 197 aaKnown RBP23.24■■□□□ 1.31
RAB40C-211ENST00000568586 TRDV1A0A1B0GX56 115 aa23.23■■□□□ 1.31
RAB40C-211ENST00000568586 BEAN1Q3B7T3 259 aa23.23■■□□□ 1.31
RAB40C-211ENST00000568586 C2orf76Q3KRA6 126 aa23.23■■□□□ 1.31
RAB40C-211ENST00000568586 UBE2UQ5VVX9 321 aa23.23■■□□□ 1.31
RAB40C-211ENST00000568586 CHPT1Q8WUD6 406 aa23.23■■□□□ 1.31
RAB40C-211ENST00000568586 YTHDF1Q9BYJ9 559 aaKnown RBP23.23■■□□□ 1.31
RAB40C-211ENST00000568586 ABCG5Q9H222 651 aa23.23■■□□□ 1.31
RAB40C-211ENST00000568586 ABRACLQ9P1F3 81 aa23.23■■□□□ 1.31
RAB40C-211ENST00000568586 PSMB11A5LHX3 300 aa23.22■■□□□ 1.31
RAB40C-211ENST00000568586 G3V4G9 280 aa23.22■■□□□ 1.31
RAB40C-211ENST00000568586 C1QL4Q86Z23 238 aa23.22■■□□□ 1.31
RAB40C-211ENST00000568586 STEAP1Q9UHE8 339 aa23.22■■□□□ 1.31
RAB40C-211ENST00000568586 AK3Q9UIJ7 227 aa23.22■■□□□ 1.31
RAB40C-211ENST00000568586 DNAH3Q8TD57 4116 aa23.22■■□□□ 1.31
RAB40C-211ENST00000568586 SHISA3A0PJX4 238 aa23.21■■□□□ 1.31
RAB40C-211ENST00000568586 CLDN12P56749 244 aa23.21■■□□□ 1.31
RAB40C-211ENST00000568586 LSAMPQ13449 338 aa23.21■■□□□ 1.31
RAB40C-211ENST00000568586 ZNF833PQ6ZTB9 187 aa23.21■■□□□ 1.31
RAB40C-211ENST00000568586 SLC35E3Q7Z769 313 aa23.21■■□□□ 1.31
RAB40C-211ENST00000568586 S1PR3Q99500 378 aa23.21■■□□□ 1.31
RAB40C-211ENST00000568586 Q9H521 79 aa23.21■■□□□ 1.31
RAB40C-211ENST00000568586 NCBP2LA6PVI3 153 aaKnown RBP23.2■■□□□ 1.3
RAB40C-211ENST00000568586 PDCD5O14737 125 aa23.2■■□□□ 1.3
RAB40C-211ENST00000568586 SPARTQ8N0X7 666 aa23.2■■□□□ 1.3
RAB40C-211ENST00000568586 FAM71E2Q8N5Q1 922 aa23.2■■□□□ 1.3
RAB40C-211ENST00000568586 NOL4LQ96MY1 436 aaPredicted RBP23.2■■□□□ 1.3
RAB40C-211ENST00000568586 MGAT4AQ9UM21 535 aa23.2■■□□□ 1.3
RAB40C-211ENST00000568586 SERPINE3A8MV23 424 aa23.19■■□□□ 1.3
RAB40C-211ENST00000568586 ITGB1BP1O14713 200 aa23.19■■□□□ 1.3
RAB40C-211ENST00000568586 GPR12P47775 334 aa23.19■■□□□ 1.3
RAB40C-211ENST00000568586 OR2AK2Q8NG84 335 aa23.19■■□□□ 1.3
RAB40C-211ENST00000568586 OR56B1Q8NGI3 324 aa23.19■■□□□ 1.3
RAB40C-211ENST00000568586 ARHGAP5-AS1Q96IT6 56 aa23.19■■□□□ 1.3
RAB40C-211ENST00000568586 IFI27L2Q9H2X8 130 aa23.19■■□□□ 1.3
RAB40C-211ENST00000568586 CHMP1AQ9HD42 196 aaPredicted RBP23.19■■□□□ 1.3
RAB40C-211ENST00000568586 RAB22AQ9UL26 194 aa23.19■■□□□ 1.3
RAB40C-211ENST00000568586 TMEM272A0A1B0GTI8 110 aa23.18■■□□□ 1.3
RAB40C-211ENST00000568586 A0A1W2PRX2 142 aa23.18■■□□□ 1.3
RAB40C-211ENST00000568586 LINC01548A6NM66 108 aa23.18■■□□□ 1.3
RAB40C-211ENST00000568586 IFITM5A6NNB3 132 aa23.18■■□□□ 1.3
RAB40C-211ENST00000568586 VEGFCP49767 419 aa23.18■■□□□ 1.3
RAB40C-211ENST00000568586 PLAC9Q5JTB6 97 aa23.18■■□□□ 1.3
RAB40C-211ENST00000568586 FAM71F2Q6NXP2 309 aa23.18■■□□□ 1.3
RAB40C-211ENST00000568586 ZNF329Q86UD4 541 aa23.18■■□□□ 1.3
RAB40C-211ENST00000568586 FOXRED2Q8IWF2 684 aa23.18■■□□□ 1.3
RAB40C-211ENST00000568586 STPG2Q8N412 459 aa23.18■■□□□ 1.3
RAB40C-211ENST00000568586 COMMD1Q8N668 190 aa23.18■■□□□ 1.3
RAB40C-211ENST00000568586 NABP2Q9BQ15 211 aa23.18■■□□□ 1.3
RAB40C-211ENST00000568586 HDHD3Q9BSH5 251 aaPredicted RBP23.18■■□□□ 1.3
RAB40C-211ENST00000568586 PECRQ9BY49 303 aa23.18■■□□□ 1.3
RAB40C-211ENST00000568586 C12orf4Q9NQ89 552 aa23.18■■□□□ 1.3
RAB40C-211ENST00000568586 F2RL1P55085 397 aa23.17■■□□□ 1.3
RAB40C-211ENST00000568586 HES5Q5TA89 166 aa23.17■■□□□ 1.3
RAB40C-211ENST00000568586 IL1F10Q8WWZ1 152 aa23.17■■□□□ 1.3
RAB40C-211ENST00000568586 ZNF251Q9BRH9 671 aa23.17■■□□□ 1.3
RAB40C-211ENST00000568586 GHITMQ9H3K2 345 aa23.17■■□□□ 1.3
RAB40C-211ENST00000568586 Q9N2K0 584 aa23.17■■□□□ 1.3
RAB40C-211ENST00000568586 AP4M1O00189 453 aa23.16■■□□□ 1.3
RAB40C-211ENST00000568586 OR10A3P58181 314 aa23.16■■□□□ 1.3
RAB40C-211ENST00000568586 PLA2G7Q13093 441 aa23.16■■□□□ 1.3
RAB40C-211ENST00000568586 FCGR1BQ92637 280 aa23.16■■□□□ 1.3
RAB40C-211ENST00000568586 AGMATQ9BSE5 352 aa23.16■■□□□ 1.3
RAB40C-211ENST00000568586 MRPL20Q9BYC9 149 aaKnown RBP23.16■■□□□ 1.3
RAB40C-211ENST00000568586 SLC23A1Q9UHI7 598 aa23.16■■□□□ 1.3
RAB40C-211ENST00000568586 ZNF580Q9UK33 172 aa23.16■■□□□ 1.3
RAB40C-211ENST00000568586 SAA2-SAA4A0A096LPE2 208 aa23.15■■□□□ 1.3
RAB40C-211ENST00000568586 SAA2P0DJI9 122 aaPredicted RBP23.15■■□□□ 1.3
RAB40C-211ENST00000568586 FGF9P31371 208 aaPredicted RBP23.15■■□□□ 1.3
RAB40C-211ENST00000568586 OR3A3P47888 321 aa23.15■■□□□ 1.3
RAB40C-211ENST00000568586 HLA-DRB3P79483 266 aa23.15■■□□□ 1.3
RAB40C-211ENST00000568586 RASL11BQ9BPW5 248 aa23.15■■□□□ 1.3
RAB40C-211ENST00000568586 ZFP57Q9NU63 452 aa23.15■■□□□ 1.3
RAB40C-211ENST00000568586 PIPOXQ9P0Z9 390 aa23.15■■□□□ 1.3
RAB40C-211ENST00000568586 KCNK7Q9Y2U2 307 aa23.15■■□□□ 1.3
RAB40C-211ENST00000568586 PF4V1P10720 104 aa23.14■■□□□ 1.29
RAB40C-211ENST00000568586 RAB3BP20337 219 aa23.14■■□□□ 1.29
RAB40C-211ENST00000568586 MYL9P24844 172 aa23.14■■□□□ 1.29
RAB40C-211ENST00000568586 SLC35B1P78383 322 aa23.14■■□□□ 1.29
RAB40C-211ENST00000568586 SETD6Q8TBK2 473 aa23.14■■□□□ 1.29
RAB40C-211ENST00000568586 PTX4Q96A99 478 aa23.14■■□□□ 1.29
RAB40C-211ENST00000568586 RBMXL1Q96E39 390 aaKnown RBP23.14■■□□□ 1.29
RAB40C-211ENST00000568586 LINC00527Q9UJ94 153 aa23.14■■□□□ 1.29
RAB40C-211ENST00000568586 RAB29O14966 203 aa23.13■■□□□ 1.29
RAB40C-211ENST00000568586 RAB6AP20340 208 aa23.13■■□□□ 1.29
RAB40C-211ENST00000568586 SLC6A1P30531 599 aa23.13■■□□□ 1.29
RAB40C-211ENST00000568586 RPL23AP62750 156 aaKnown RBP23.13■■□□□ 1.29
RAB40C-211ENST00000568586 OXLD1Q5BKU9 147 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms