RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 TOP2AP11388 1531 aaKnown RBP1.85□□□□□ -2.11
CHD9-215ENST00000565442 CLUHO75153 1309 aa1.85□□□□□ -2.11
CHD9-215ENST00000565442 ZNF638Q14966 1978 aaKnown RBP1.85□□□□□ -2.11
CHD9-215ENST00000565442 SYNJ1O43426 1573 aa1.85□□□□□ -2.11
CHD9-215ENST00000565442 ATAD5Q96QE3 1844 aa1.84□□□□□ -2.11
CHD9-215ENST00000565442 VPS37CA5D8V6 355 aaPredicted RBP1.84□□□□□ -2.11
CHD9-215ENST00000565442 C17orf51A8MQB3 221 aa1.84□□□□□ -2.11
CHD9-215ENST00000565442 ARL6IP5O75915 188 aa1.84□□□□□ -2.11
CHD9-215ENST00000565442 NQO1P15559 274 aaKnown RBP1.84□□□□□ -2.11
CHD9-215ENST00000565442 F8A1P23610 371 aa1.84□□□□□ -2.11
CHD9-215ENST00000565442 AKR1C2P52895 323 aa1.84□□□□□ -2.11
CHD9-215ENST00000565442 EXOC3L4Q17RC7 722 aa1.84□□□□□ -2.11
CHD9-215ENST00000565442 TMEM176BQ3YBM2 270 aaPredicted RBP1.84□□□□□ -2.11
CHD9-215ENST00000565442 ACSBG2Q5FVE4 666 aa1.84□□□□□ -2.11
CHD9-215ENST00000565442 FAM45BPQ6NSW5 357 aa1.84□□□□□ -2.11
CHD9-215ENST00000565442 TNFAIP8L1Q8WVP5 186 aa1.84□□□□□ -2.11
CHD9-215ENST00000565442 SMIM12Q96EX1 92 aa1.84□□□□□ -2.11
CHD9-215ENST00000565442 GPR22Q99680 433 aa1.84□□□□□ -2.11
CHD9-215ENST00000565442 GLS2Q9UI32 602 aa1.84□□□□□ -2.11
CHD9-215ENST00000565442 DNAJC12Q9UKB3 198 aa1.84□□□□□ -2.11
CHD9-215ENST00000565442 CFAP45Q9UL16 551 aa1.84□□□□□ -2.11
CHD9-215ENST00000565442 MRPS16Q9Y3D3 137 aaKnown RBP1.84□□□□□ -2.11
CHD9-215ENST00000565442 FIS1Q9Y3D6 152 aa1.84□□□□□ -2.11
CHD9-215ENST00000565442 HEY1Q9Y5J3 304 aa1.84□□□□□ -2.11
CHD9-215ENST00000565442 TRGV4A0A0C4DH28 118 aa1.83□□□□□ -2.12
CHD9-215ENST00000565442 ATP6V1G2O95670 118 aa1.83□□□□□ -2.12
CHD9-215ENST00000565442 SOD1P00441 154 aa1.83□□□□□ -2.12
CHD9-215ENST00000565442 BLVRBP30043 206 aaPredicted RBP1.83□□□□□ -2.12
CHD9-215ENST00000565442 AGTR1P30556 359 aa1.83□□□□□ -2.12
CHD9-215ENST00000565442 SLC35A2P78381 396 aa1.83□□□□□ -2.12
CHD9-215ENST00000565442 MRPL51Q4U2R6 128 aaKnown RBP1.83□□□□□ -2.12
CHD9-215ENST00000565442 ERMNQ8TAM6 284 aa1.83□□□□□ -2.12
CHD9-215ENST00000565442 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.83□□□□□ -2.12
CHD9-215ENST00000565442 CCL26Q9Y258 94 aa1.83□□□□□ -2.12
CHD9-215ENST00000565442 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.83□□□□□ -2.12
CHD9-215ENST00000565442 MINOS1-NBL1R4GNA1 71 aa1.83□□□□□ -2.12
CHD9-215ENST00000565442 THOC2Q8NI27 1593 aaKnown RBP1.83□□□□□ -2.12
CHD9-215ENST00000565442 MYO9BQ13459 2157 aa1.83□□□□□ -2.12
CHD9-215ENST00000565442 WDR97A6NE52 1622 aa1.83□□□□□ -2.12
CHD9-215ENST00000565442 TRPM6Q9BX84 2022 aa1.83□□□□□ -2.12
CHD9-215ENST00000565442 DAPL1A0PJW8 107 aa1.82□□□□□ -2.12
CHD9-215ENST00000565442 LINC00862A6NCI5 91 aa1.82□□□□□ -2.12
CHD9-215ENST00000565442 TOX3O15405 576 aaPredicted RBP1.82□□□□□ -2.12
CHD9-215ENST00000565442 PET100P0DJ07 73 aa1.82□□□□□ -2.12
CHD9-215ENST00000565442 OR13C7P0DN81 318 aa1.82□□□□□ -2.12
CHD9-215ENST00000565442 CASQ1P31415 396 aa1.82□□□□□ -2.12
CHD9-215ENST00000565442 ZNF117Q03924 483 aa1.82□□□□□ -2.12
CHD9-215ENST00000565442 SMAGPQ0VAQ4 97 aa1.82□□□□□ -2.12
CHD9-215ENST00000565442 SPATA31B1PQ5VZV4 182 aa1.82□□□□□ -2.12
CHD9-215ENST00000565442 LFNGQ8NES3 379 aa1.82□□□□□ -2.12
CHD9-215ENST00000565442 OR11H1Q8NG94 326 aa1.82□□□□□ -2.12
CHD9-215ENST00000565442 OR4C16Q8NGL9 310 aa1.82□□□□□ -2.12
CHD9-215ENST00000565442 OR10A6Q8NH74 314 aa1.82□□□□□ -2.12
CHD9-215ENST00000565442 TRNT1Q96Q11 434 aaKnown RBP1.82□□□□□ -2.12
CHD9-215ENST00000565442 C1QTNF6Q9BXI9 259 aa1.82□□□□□ -2.12
CHD9-215ENST00000565442 METTL9Q9H1A3 318 aa1.82□□□□□ -2.12
CHD9-215ENST00000565442 MED28Q9H204 178 aa1.82□□□□□ -2.12
CHD9-215ENST00000565442 SNX10Q9Y5X0 201 aa1.82□□□□□ -2.12
CHD9-215ENST00000565442 GMEB1Q9Y692 573 aa1.82□□□□□ -2.12
CHD9-215ENST00000565442 PBRM1Q86U86 1689 aa1.82□□□□□ -2.12
CHD9-215ENST00000565442 PTPRJQ12913 1337 aa1.82□□□□□ -2.12
CHD9-215ENST00000565442 CHD2O14647 1828 aaKnown RBP1.82□□□□□ -2.12
CHD9-215ENST00000565442 CCDC88BA6NC98 1476 aa1.82□□□□□ -2.12
CHD9-215ENST00000565442 PEG3Q9GZU2 1588 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 ADAMTSL1Q8N6G6 1762 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 A0A0J9YX75 114 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 C19orf71A6NCJ1 209 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 METTL15A6NJ78 407 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 ODF3BA8MYP8 253 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 STK16O75716 305 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 ZNF189O75820 626 aaPredicted RBP1.81□□□□□ -2.12
CHD9-215ENST00000565442 P0DMU3 169 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 FAM231AP0DMU4 169 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 FAM231CP0DMU5 169 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 IGHV3-30-3P0DP02 117 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 ZNF7P17097 686 aaPredicted RBP1.81□□□□□ -2.12
CHD9-215ENST00000565442 CDK2P24941 298 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 LPAR6P43657 344 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 OR1E2P47887 323 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 RWDD2BP57060 319 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 LINC00313P59037 77 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 C4orf26Q17RF5 130 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 DNAL1Q4LDG9 190 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 MESTQ5EB52 335 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 SPATA24Q86W54 205 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 OR7G1Q8NGA0 311 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 STOML3Q8TAV4 291 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 ACY3Q96HD9 319 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 ABHD14BQ96IU4 210 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 RBP7Q96R05 134 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 MGLLQ99685 303 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 UPK3BQ9BT76 320 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 SMDT1Q9H4I9 107 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 C16orf95Q9H693 158 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 SAMHD1Q9Y3Z3 626 aaKnown RBP1.81□□□□□ -2.12
CHD9-215ENST00000565442 ALG5Q9Y673 324 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 CACNA1GO43497 2377 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 TMEM94Q12767 1356 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 OTOFQ9HC10 1997 aa1.81□□□□□ -2.12
CHD9-215ENST00000565442 CHD1O14646 1710 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms