RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 PRDX2P32119 198 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 TGFBR1P36897 503 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 CEBPDP49716 269 aaPredicted RBP4.85□□□□□ -1.63
LRRC28-220ENST00000561253 OR10A3P58181 314 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 GMFBP60983 142 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 FGF12P61328 243 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 PAX5Q02548 391 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 PNRC1Q12796 327 aaPredicted RBP4.85□□□□□ -1.63
LRRC28-220ENST00000561253 MICBQ29980 383 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 SMIM21Q3B7S5 101 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 RUSC1-AS1Q66K80 236 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 GDPGP1Q6ZNW5 385 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 TCF23Q7RTU1 214 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 CENPVQ7Z7K6 275 aaPredicted RBP4.85□□□□□ -1.63
LRRC28-220ENST00000561253 NFE4Q86UQ8 179 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 MKXQ8IYA7 352 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 Q8IYB0 196 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 FAM58AQ8N1B3 248 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 ZNRF1Q8ND25 227 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 LY6G5BQ8NDX9 201 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 OR10K1Q8NGX5 313 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 C8orf46Q8TAG6 207 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 TNFAIP8L1Q8WVP5 186 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 C17orf77Q96MU5 243 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 GAL3ST1Q99999 423 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 FUNDC2Q9BWH2 189 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 MMP26Q9NRE1 261 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 CKLFQ9UBR5 152 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 MIOXQ9UGB7 285 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 OPN4Q9UHM6 478 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 AK6Q9Y3D8 172 aaKnown RBP4.85□□□□□ -1.63
LRRC28-220ENST00000561253 TRAV24A0A0B4J272 114 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 ISPDA4D126 451 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 B4DSR2 109 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 K7N7A8 449 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 AIPO00170 330 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 OR2H2O95918 312 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 CSN2P05814 226 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 MSMBP08118 114 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 CALCBP10092 127 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 RPS2P15880 293 aaKnown RBP4.84□□□□□ -1.63
LRRC28-220ENST00000561253 SDC2P34741 201 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 OR3A1P47881 315 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 PITPNBP48739 271 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 DLX6P56179 175 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 CAV3P56539 151 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 RBM11P57052 281 aaKnown RBP4.84□□□□□ -1.63
LRRC28-220ENST00000561253 PAX8Q06710 450 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 KCNJ8Q15842 424 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 PIGYQ3MUY2 71 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 SPIN3Q5JUX0 258 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 GLIPR1L1Q6UWM5 242 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 RBPMS2Q6ZRY4 209 aaKnown RBP4.84□□□□□ -1.63
LRRC28-220ENST00000561253 RTN4RL2Q86UN3 420 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 GAPTQ8N292 157 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 JAGN1Q8N5M9 183 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 C11orf42Q8N5U0 333 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 SLC24A4Q8NFF2 622 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 OR6M1Q8NGM8 313 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 OR5M8Q8NGP6 311 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 EMG1Q92979 244 aaKnown RBP4.84□□□□□ -1.63
LRRC28-220ENST00000561253 RAB39BQ96DA2 213 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 CPNE2Q96FN4 548 aaPredicted RBP4.84□□□□□ -1.63
LRRC28-220ENST00000561253 COQ2Q96H96 371 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 BARHL1Q9BZE3 327 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 NEK6Q9HC98 313 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 GHRLQ9UBU3 117 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 MRPS28Q9Y2Q9 187 aaKnown RBP4.84□□□□□ -1.63
LRRC28-220ENST00000561253 V9GY05 133 aa4.84□□□□□ -1.63
LRRC28-220ENST00000561253 KIAA2026Q5HYC2 2103 aa4.84□□□□□ -1.64
LRRC28-220ENST00000561253 TRRAPQ9Y4A5 3859 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 A0A0B4J203 849 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 IGHV2-70DA0A0C4DH43 119 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 KIR2DS1A0A191URI9 304 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 SLC33A1O00400 549 aaPredicted RBP4.83□□□□□ -1.64
LRRC28-220ENST00000561253 GEMIN2O14893 280 aaKnown RBP4.83□□□□□ -1.64
LRRC28-220ENST00000561253 MAGEB3O15480 346 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 AIREO43918 545 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 ZNF780AO75290 641 aaPredicted RBP4.83□□□□□ -1.64
LRRC28-220ENST00000561253 HAND1O96004 215 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 UBBP0CG47 229 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 CGB3P0DN86 165 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 CGB7P0DN87 165 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 SLC2A2P11168 524 aaPredicted RBP4.83□□□□□ -1.64
LRRC28-220ENST00000561253 PRKACAP17612 351 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 RAB3BP20337 219 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 HTR2CP28335 458 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 RPL5P46777 297 aaKnown RBP4.83□□□□□ -1.64
LRRC28-220ENST00000561253 NPY4RP50391 375 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 BMXP51813 675 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 EFNB2P52799 333 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 CLDN12P56749 244 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 NCS1P62166 190 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 RPS27AP62979 156 aaKnown RBP4.83□□□□□ -1.64
LRRC28-220ENST00000561253 LCN2P80188 198 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 SLC22A6Q4U2R8 563 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 KRBOX4Q5JUW0 171 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 GLT8D1Q68CQ7 371 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 CYB5R2Q6BCY4 276 aa4.83□□□□□ -1.64
LRRC28-220ENST00000561253 OR10K2Q6IF99 312 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms