RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 NAPSAO96009 420 aa12.1□□□□□ -0.47
RPL28-206ENST00000558752 SNRNP70P08621 437 aaKnown RBP12.1□□□□□ -0.47
RPL28-206ENST00000558752 MYL9P24844 172 aa12.1□□□□□ -0.47
RPL28-206ENST00000558752 FGF9P31371 208 aaPredicted RBP12.1□□□□□ -0.47
RPL28-206ENST00000558752 KRTAP10-11P60412 298 aa12.1□□□□□ -0.47
RPL28-206ENST00000558752 MORN2Q502X0 79 aa12.1□□□□□ -0.47
RPL28-206ENST00000558752 ZNF880Q6PDB4 577 aa12.1□□□□□ -0.47
RPL28-206ENST00000558752 MOB1BQ7L9L4 216 aa12.1□□□□□ -0.47
RPL28-206ENST00000558752 C6orf201Q7Z4U5 140 aa12.1□□□□□ -0.47
RPL28-206ENST00000558752 MOB3BQ86TA1 216 aa12.1□□□□□ -0.47
RPL28-206ENST00000558752 PRR18Q8N4B5 295 aa12.1□□□□□ -0.47
RPL28-206ENST00000558752 OR56B1Q8NGI3 324 aa12.1□□□□□ -0.47
RPL28-206ENST00000558752 OR56B4Q8NH76 319 aa12.1□□□□□ -0.47
RPL28-206ENST00000558752 OR1L1Q8NH94 360 aa12.1□□□□□ -0.47
RPL28-206ENST00000558752 GFI1Q99684 422 aa12.1□□□□□ -0.47
RPL28-206ENST00000558752 GHITMQ9H3K2 345 aa12.1□□□□□ -0.47
RPL28-206ENST00000558752 ZFP57Q9NU63 452 aa12.1□□□□□ -0.47
RPL28-206ENST00000558752 A0A1W2PPE3 182 aa12.09□□□□□ -0.47
RPL28-206ENST00000558752 LANCL1O43813 399 aa12.09□□□□□ -0.47
RPL28-206ENST00000558752 NHLRC4P0CG21 123 aaPredicted RBP12.09□□□□□ -0.47
RPL28-206ENST00000558752 TMEM11P17152 192 aa12.09□□□□□ -0.47
RPL28-206ENST00000558752 HES1Q14469 280 aa12.09□□□□□ -0.47
RPL28-206ENST00000558752 P2RY14Q15391 338 aa12.09□□□□□ -0.47
RPL28-206ENST00000558752 CT45A1Q5HYN5 189 aa12.09□□□□□ -0.47
RPL28-206ENST00000558752 ZNF773Q6PK81 442 aa12.09□□□□□ -0.47
RPL28-206ENST00000558752 LINC00482Q8N8I6 264 aa12.09□□□□□ -0.47
RPL28-206ENST00000558752 ZNF439Q8NDP4 499 aa12.09□□□□□ -0.47
RPL28-206ENST00000558752 OR8H1Q8NGG4 311 aa12.09□□□□□ -0.47
RPL28-206ENST00000558752 OR2T10Q8NGZ9 312 aa12.09□□□□□ -0.47
RPL28-206ENST00000558752 CT45A3Q8NHU0 189 aa12.09□□□□□ -0.47
RPL28-206ENST00000558752 RTN4IP1Q8WWV3 396 aaPredicted RBP12.09□□□□□ -0.47
RPL28-206ENST00000558752 TENM3Q9P273 2699 aa12.09□□□□□ -0.47
RPL28-206ENST00000558752 IGHV3-43A0A0B4J1X8 118 aa12.08□□□□□ -0.48
RPL28-206ENST00000558752 IFITM5A6NNB3 132 aa12.08□□□□□ -0.48
RPL28-206ENST00000558752 LDLRAD4O15165 306 aa12.08□□□□□ -0.48
RPL28-206ENST00000558752 SOCS1O15524 211 aa12.08□□□□□ -0.48
RPL28-206ENST00000558752 AMY1AP04745 511 aa12.08□□□□□ -0.48
RPL28-206ENST00000558752 AMY2AP04746 511 aa12.08□□□□□ -0.48
RPL28-206ENST00000558752 IGHV3-43DP0DP04 118 aa12.08□□□□□ -0.48
RPL28-206ENST00000558752 RAB3BP20337 219 aa12.08□□□□□ -0.48
RPL28-206ENST00000558752 HOXD3P31249 432 aaPredicted RBP12.08□□□□□ -0.48
RPL28-206ENST00000558752 MYCNOSP40205 109 aa12.08□□□□□ -0.48
RPL28-206ENST00000558752 ZNF134P52741 427 aa12.08□□□□□ -0.48
RPL28-206ENST00000558752 SLC35B1P78383 322 aa12.08□□□□□ -0.48
RPL28-206ENST00000558752 DIAPH2-AS1Q14236 149 aa12.08□□□□□ -0.48
RPL28-206ENST00000558752 HMGN3Q15651 99 aa12.08□□□□□ -0.48
RPL28-206ENST00000558752 TGIF2LXQ8IUE1 241 aa12.08□□□□□ -0.48
RPL28-206ENST00000558752 MRPL41Q8IXM3 137 aaKnown RBP12.08□□□□□ -0.48
RPL28-206ENST00000558752 IZUMO1Q8IYV9 350 aa12.08□□□□□ -0.48
RPL28-206ENST00000558752 COMMD1Q8N668 190 aa12.08□□□□□ -0.48
RPL28-206ENST00000558752 UBALD1Q8TB05 177 aa12.08□□□□□ -0.48
RPL28-206ENST00000558752 CHPT1Q8WUD6 406 aa12.08□□□□□ -0.48
RPL28-206ENST00000558752 PTX4Q96A99 478 aa12.08□□□□□ -0.48
RPL28-206ENST00000558752 NICN1Q9BSH3 213 aa12.08□□□□□ -0.48
RPL28-206ENST00000558752 CENPOQ9BU64 300 aa12.08□□□□□ -0.48
RPL28-206ENST00000558752 CHMP1AQ9HD42 196 aaPredicted RBP12.08□□□□□ -0.48
RPL28-206ENST00000558752 SSR3Q9UNL2 185 aa12.08□□□□□ -0.48
RPL28-206ENST00000558752 RRP15Q9Y3B9 282 aaKnown RBP12.08□□□□□ -0.48
RPL28-206ENST00000558752 A0A0A6YYD4 124 aa12.07□□□□□ -0.48
RPL28-206ENST00000558752 METTL21EPA6NDL7 271 aa12.07□□□□□ -0.48
RPL28-206ENST00000558752 FOXI3A8MTJ6 420 aaPredicted RBP12.07□□□□□ -0.48
RPL28-206ENST00000558752 NUDT19A8MXV4 375 aa12.07□□□□□ -0.48
RPL28-206ENST00000558752 ITGB1BP1O14713 200 aa12.07□□□□□ -0.48
RPL28-206ENST00000558752 RAMP3O60896 148 aa12.07□□□□□ -0.48
RPL28-206ENST00000558752 MOSP00540 346 aa12.07□□□□□ -0.48
RPL28-206ENST00000558752 IGKV1D-33P01593 117 aa12.07□□□□□ -0.48
RPL28-206ENST00000558752 IGKV1-33P01594 117 aa12.07□□□□□ -0.48
RPL28-206ENST00000558752 RAB6AP20340 208 aa12.07□□□□□ -0.48
RPL28-206ENST00000558752 PSMB9P28065 219 aa12.07□□□□□ -0.48
RPL28-206ENST00000558752 TMEM50BP56557 158 aa12.07□□□□□ -0.48
RPL28-206ENST00000558752 DGCR2P98153 550 aa12.07□□□□□ -0.48
RPL28-206ENST00000558752 TPRA1Q86W33 373 aa12.07□□□□□ -0.48
RPL28-206ENST00000558752 OR10V1Q8NGI7 309 aa12.07□□□□□ -0.48
RPL28-206ENST00000558752 EAF1Q96JC9 268 aaPredicted RBP12.07□□□□□ -0.48
RPL28-206ENST00000558752 ABHD14AQ9BUJ0 271 aa12.07□□□□□ -0.48
RPL28-206ENST00000558752 COL7A1Q02388 2944 aa12.06□□□□□ -0.48
RPL28-206ENST00000558752 THBS3P49746 956 aa12.06□□□□□ -0.48
RPL28-206ENST00000558752 VEGFCP49767 419 aa12.06□□□□□ -0.48
RPL28-206ENST00000558752 RPL23AP62750 156 aaKnown RBP12.06□□□□□ -0.48
RPL28-206ENST00000558752 ARL6IP1Q15041 203 aa12.06□□□□□ -0.48
RPL28-206ENST00000558752 KCTD21Q4G0X4 260 aa12.06□□□□□ -0.48
RPL28-206ENST00000558752 C22orf42Q6IC83 251 aa12.06□□□□□ -0.48
RPL28-206ENST00000558752 C5orf56Q8N8D9 126 aa12.06□□□□□ -0.48
RPL28-206ENST00000558752 OR2AK2Q8NG84 335 aa12.06□□□□□ -0.48
RPL28-206ENST00000558752 OR52L2PQ8NGH6 319 aa12.06□□□□□ -0.48
RPL28-206ENST00000558752 PECRQ9BY49 303 aa12.06□□□□□ -0.48
RPL28-206ENST00000558752 C12orf4Q9NQ89 552 aa12.06□□□□□ -0.48
RPL28-206ENST00000558752 PIPOXQ9P0Z9 390 aa12.06□□□□□ -0.48
RPL28-206ENST00000558752 AK3Q9UIJ7 227 aa12.06□□□□□ -0.48
RPL28-206ENST00000558752 STUB1Q9UNE7 303 aa12.06□□□□□ -0.48
RPL28-206ENST00000558752 TMEM272A0A1B0GTI8 110 aa12.05□□□□□ -0.48
RPL28-206ENST00000558752 SLC31A2O15432 143 aa12.05□□□□□ -0.48
RPL28-206ENST00000558752 GADD45AP24522 165 aa12.05□□□□□ -0.48
RPL28-206ENST00000558752 REG1BP48304 166 aa12.05□□□□□ -0.48
RPL28-206ENST00000558752 CLDN12P56749 244 aa12.05□□□□□ -0.48
RPL28-206ENST00000558752 MRPS15P82914 257 aaKnown RBP12.05□□□□□ -0.48
RPL28-206ENST00000558752 HNF4GQ14541 408 aa12.05□□□□□ -0.48
RPL28-206ENST00000558752 HES5Q5TA89 166 aa12.05□□□□□ -0.48
RPL28-206ENST00000558752 FAM71F2Q6NXP2 309 aa12.05□□□□□ -0.48
RPL28-206ENST00000558752 FOXRED2Q8IWF2 684 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms