RNA–Protein interactions for RNA: ENST00000558088.1

VPS13C-205, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-205ENST00000558088 ZNF728P0DKX0 622 aa0.03□□□□□ -2.4
VPS13C-205ENST00000558088 AKR1C4P17516 323 aa0.03□□□□□ -2.4
VPS13C-205ENST00000558088 DEKP35659 375 aaKnown RBP0.03□□□□□ -2.4
VPS13C-205ENST00000558088 ACTR1BP42025 376 aa0.03□□□□□ -2.4
VPS13C-205ENST00000558088 DNASE1L1P49184 302 aa0.03□□□□□ -2.4
VPS13C-205ENST00000558088 FAM3AP98173 230 aa0.03□□□□□ -2.4
VPS13C-205ENST00000558088 CDK10Q15131 360 aa0.03□□□□□ -2.4
VPS13C-205ENST00000558088 GUSBP1Q15486 140 aa0.03□□□□□ -2.4
VPS13C-205ENST00000558088 HNRNPA1L2Q32P51 320 aaKnown RBP0.03□□□□□ -2.4
VPS13C-205ENST00000558088 LGALS9BQ3B8N2 356 aa0.03□□□□□ -2.4
VPS13C-205ENST00000558088 KTN1-AS1Q86SY8 53 aa0.03□□□□□ -2.4
VPS13C-205ENST00000558088 OR51L1Q8NGJ5 315 aa0.03□□□□□ -2.4
VPS13C-205ENST00000558088 OR51T1Q8NGJ9 327 aa0.03□□□□□ -2.4
VPS13C-205ENST00000558088 OR5D18Q8NGL1 313 aa0.03□□□□□ -2.4
VPS13C-205ENST00000558088 OR13C9Q8NGT0 318 aa0.03□□□□□ -2.4
VPS13C-205ENST00000558088 ANGPTL6Q8NI99 470 aa0.03□□□□□ -2.4
VPS13C-205ENST00000558088 TMA16Q96EY4 203 aaKnown RBP0.03□□□□□ -2.4
VPS13C-205ENST00000558088 TRNT1Q96Q11 434 aaKnown RBP0.03□□□□□ -2.4
VPS13C-205ENST00000558088 MRPL57Q9BQC6 102 aaKnown RBP0.03□□□□□ -2.4
VPS13C-205ENST00000558088 C1QTNF6Q9BXI9 259 aa0.03□□□□□ -2.4
VPS13C-205ENST00000558088 C11orf49Q9H6J7 331 aa0.03□□□□□ -2.4
VPS13C-205ENST00000558088 TAAR3PQ9P1P4 343 aa0.03□□□□□ -2.4
VPS13C-205ENST00000558088 MTCH2Q9Y6C9 303 aa0.03□□□□□ -2.4
VPS13C-205ENST00000558088 ZFHX2Q9C0A1 2572 aaPredicted RBP0.02□□□□□ -2.41
VPS13C-205ENST00000558088 TRGV5A0A0B4J1U4 118 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 SERTM2A0A1B0GWG4 89 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 LINC00862A6NCI5 91 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 FAM183AA6NL82 134 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 OR11H12B2RN74 326 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 BOLA2-SMG1P6H3BVE0 249 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 SLC17A3O00476 420 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 KLRC4O43908 158 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 STK16O75716 305 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 VAPBO95292 243 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 UCHL1P09936 223 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 UBBP0CG47 229 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 ANXA8P13928 327 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 TUBG1P23258 451 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 ATP6V0CP27449 155 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 AQP4P55087 323 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 DSTNP60981 165 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 GNA12Q03113 381 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 SPAG1Q07617 926 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 TRIP13Q15645 432 aaPredicted RBP0.02□□□□□ -2.41
VPS13C-205ENST00000558088 MOGQ16653 247 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 HENMT1Q5T8I9 393 aaKnown RBP0.02□□□□□ -2.41
VPS13C-205ENST00000558088 ANXA8L1Q5VT79 327 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 HBMQ6B0K9 141 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 OR10K2Q6IF99 312 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 CLEC2AQ6UVW9 174 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 SLC13A5Q86YT5 568 aaPredicted RBP0.02□□□□□ -2.41
VPS13C-205ENST00000558088 SBSPONQ8IVN8 264 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 OR11H2Q8NH07 326 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 DTD1Q8TEA8 209 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 CCDC127Q96BQ5 260 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 PGLYRP3Q96LB9 341 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 TBX5Q99593 518 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 UPK3BQ9BT76 320 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 EBPLQ9BY08 206 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 REG4Q9BYZ8 158 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 ANKHQ9HCJ1 492 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 TUBG2Q9NRH3 451 aa0.02□□□□□ -2.41
VPS13C-205ENST00000558088 KIAA2026Q5HYC2 2103 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 IGHV3-64A0A075B6Q5 118 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 OR5K4A6NMS3 321 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 CCDC169A6NNP5 214 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 TMEM250H0YL14 139 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 UBDO15205 165 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 PLA2G10O15496 165 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 CYTH3O43739 400 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 GMDSO60547 372 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 OR13C7P0DN81 318 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 XCL1P47992 114 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 BEX3Q00994 111 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 MGAT3Q09327 533 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 ELOBQ15370 118 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 TRAM1Q15629 374 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 HIKESHIQ53FT3 197 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 CENPWQ5EE01 88 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 AMTNQ6UX39 209 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 Q8N2B8 174 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 CNEP1R1Q8N9A8 125 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 OR4K17Q8NGC6 315 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 OR2AE1Q8NHA4 323 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 FNDC9Q8TBE3 224 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 MBD3L1Q8WWY6 194 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 SLC7A6Q92536 515 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 PRSS27Q9BQR3 290 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 CHID1Q9BWS9 393 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 GTSF1LQ9H1H1 148 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 BLZF1Q9H2G9 400 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 C11orf1Q9H5F2 150 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 SLC2A9Q9NRM0 540 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 DMAC2Q9NW81 257 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 TAS2R13Q9NYV9 303 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 GLS2Q9UI32 602 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 TIMM9Q9Y5J7 89 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 ABCB11O95342 1321 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 PLCH2O75038 1416 aa0.01□□□□□ -2.41
VPS13C-205ENST00000558088 CUL9Q8IWT3 2517 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms