RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 DCUN1D5Q9BTE7 237 aa9.38□□□□□ -0.91
CKAP4-202ENST00000552828 MCRIP2Q9BUT9 160 aaKnown RBP9.38□□□□□ -0.91
CKAP4-202ENST00000552828 LPAR5Q9H1C0 372 aa9.38□□□□□ -0.91
CKAP4-202ENST00000552828 RNF167Q9H6Y7 350 aa9.38□□□□□ -0.91
CKAP4-202ENST00000552828 PLEKHJ1Q9NW61 149 aa9.38□□□□□ -0.91
CKAP4-202ENST00000552828 CALYQ9NYX4 217 aa9.38□□□□□ -0.91
CKAP4-202ENST00000552828 SMIM30A4D0T7 59 aa9.37□□□□□ -0.91
CKAP4-202ENST00000552828 PSMB11A5LHX3 300 aa9.37□□□□□ -0.91
CKAP4-202ENST00000552828 TOR1AO14656 332 aa9.37□□□□□ -0.91
CKAP4-202ENST00000552828 LDLRAD4O15165 306 aa9.37□□□□□ -0.91
CKAP4-202ENST00000552828 GABARAPO95166 117 aa9.37□□□□□ -0.91
CKAP4-202ENST00000552828 IL1AP01583 271 aa9.37□□□□□ -0.91
CKAP4-202ENST00000552828 CHATP28329 748 aa9.37□□□□□ -0.91
CKAP4-202ENST00000552828 MNDAP41218 407 aa9.37□□□□□ -0.91
CKAP4-202ENST00000552828 RPL23AP62750 156 aaKnown RBP9.37□□□□□ -0.91
CKAP4-202ENST00000552828 MXD1Q05195 221 aa9.37□□□□□ -0.91
CKAP4-202ENST00000552828 KHDC1LQ5JSQ8 128 aa9.37□□□□□ -0.91
CKAP4-202ENST00000552828 UTF1Q5T230 341 aa9.37□□□□□ -0.91
CKAP4-202ENST00000552828 SFXN4Q6P4A7 337 aa9.37□□□□□ -0.91
CKAP4-202ENST00000552828 C6orf201Q7Z4U5 140 aa9.37□□□□□ -0.91
CKAP4-202ENST00000552828 OR56B1Q8NGI3 324 aa9.37□□□□□ -0.91
CKAP4-202ENST00000552828 DPF1Q92782 380 aa9.37□□□□□ -0.91
CKAP4-202ENST00000552828 FAAP24Q9BTP7 215 aa9.37□□□□□ -0.91
CKAP4-202ENST00000552828 NAA50Q9GZZ1 169 aaKnown RBP9.37□□□□□ -0.91
CKAP4-202ENST00000552828 LINC00574Q9H8X3 128 aa9.37□□□□□ -0.91
CKAP4-202ENST00000552828 ZFP57Q9NU63 452 aa9.37□□□□□ -0.91
CKAP4-202ENST00000552828 TRAPPC2LQ9UL33 140 aa9.37□□□□□ -0.91
CKAP4-202ENST00000552828 MOB4Q9Y3A3 225 aa9.37□□□□□ -0.91
CKAP4-202ENST00000552828 A0A0A6YYD4 124 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 TRAV39A0A0B4J263 110 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 FAM172BPA6NC97 362 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 METTL21EPA6NDL7 271 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 NPIPB11E5RHQ5 1161 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 SOCS1O15524 211 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 ORC5O43913 435 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 SLC2A2P11168 524 aaPredicted RBP9.36□□□□□ -0.91
CKAP4-202ENST00000552828 RAB6AP20340 208 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 NFYBP25208 207 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 VEGFCP49767 419 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 C6orf183Q5T699 404 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 TRAT1Q6PIZ9 186 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 SLC16A12Q6ZSM3 486 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 ZNF329Q86UD4 541 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 GAPTQ8N292 157 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 OR10A7Q8NGE5 316 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 OR4K15Q8NH41 348 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 OR9G1Q8NH87 305 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 RFESDQ8TAC1 157 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 CHPT1Q8WUD6 406 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 ARL11Q969Q4 196 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 PTX4Q96A99 478 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 KIRREL1Q96J84 757 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 P2RX4Q99571 388 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 SULT4A1Q9BR01 284 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 FUNDC2Q9BWH2 189 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 RAB9BQ9NP90 201 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 IDI2-AS1Q9NZ38 188 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 ZMAT5Q9UDW3 170 aaKnown RBP9.36□□□□□ -0.91
CKAP4-202ENST00000552828 DAPK2Q9UIK4 370 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 HSF4Q9ULV5 492 aa9.36□□□□□ -0.91
CKAP4-202ENST00000552828 DNAH7Q8WXX0 4024 aa9.35□□□□□ -0.91
CKAP4-202ENST00000552828 A0A0B4J203 849 aa9.35□□□□□ -0.91
CKAP4-202ENST00000552828 SPINT2O43291 252 aa9.35□□□□□ -0.91
CKAP4-202ENST00000552828 FGF16O43320 207 aa9.35□□□□□ -0.91
CKAP4-202ENST00000552828 PFDN1O60925 122 aa9.35□□□□□ -0.91
CKAP4-202ENST00000552828 TMEM127O75204 238 aa9.35□□□□□ -0.91
CKAP4-202ENST00000552828 CLEC2LP0C7M8 214 aa9.35□□□□□ -0.91
CKAP4-202ENST00000552828 NHLRC4P0CG21 123 aaPredicted RBP9.35□□□□□ -0.91
CKAP4-202ENST00000552828 SSTR5P35346 364 aa9.35□□□□□ -0.91
CKAP4-202ENST00000552828 MYCNOSP40205 109 aa9.35□□□□□ -0.91
CKAP4-202ENST00000552828 LSM3P62310 102 aaKnown RBP9.35□□□□□ -0.91
CKAP4-202ENST00000552828 ZNF846Q147U1 533 aa9.35□□□□□ -0.91
CKAP4-202ENST00000552828 C9orf152Q5JTZ5 239 aa9.35□□□□□ -0.91
CKAP4-202ENST00000552828 C5orf56Q8N8D9 126 aa9.35□□□□□ -0.91
CKAP4-202ENST00000552828 S100ZQ8WXG8 99 aa9.35□□□□□ -0.91
CKAP4-202ENST00000552828 RIMS4Q9H426 269 aaPredicted RBP9.35□□□□□ -0.91
CKAP4-202ENST00000552828 KCNIP1Q9NZI2 227 aa9.35□□□□□ -0.91
CKAP4-202ENST00000552828 FOXI3A8MTJ6 420 aaPredicted RBP9.34□□□□□ -0.91
CKAP4-202ENST00000552828 C12orf77C9JDV5 145 aa9.34□□□□□ -0.91
CKAP4-202ENST00000552828 C15orf65H3BRN8 121 aa9.34□□□□□ -0.91
CKAP4-202ENST00000552828 J3QR06 171 aa9.34□□□□□ -0.91
CKAP4-202ENST00000552828 IGHG2P01859 326 aa9.34□□□□□ -0.91
CKAP4-202ENST00000552828 SNRNP70P08621 437 aaKnown RBP9.34□□□□□ -0.91
CKAP4-202ENST00000552828 ZNF182P17025 639 aaPredicted RBP9.34□□□□□ -0.91
CKAP4-202ENST00000552828 RCC1P18754 421 aaPredicted RBP9.34□□□□□ -0.91
CKAP4-202ENST00000552828 TMEM50BP56557 158 aa9.34□□□□□ -0.91
CKAP4-202ENST00000552828 PLA2G7Q13093 441 aa9.34□□□□□ -0.91
CKAP4-202ENST00000552828 CTF1Q16619 201 aa9.34□□□□□ -0.91
CKAP4-202ENST00000552828 LTC4SQ16873 150 aa9.34□□□□□ -0.91
CKAP4-202ENST00000552828 IDNKQ5T6J7 187 aa9.34□□□□□ -0.91
CKAP4-202ENST00000552828 C18orf65Q6ZTR6 163 aa9.34□□□□□ -0.91
CKAP4-202ENST00000552828 C8orf86Q6ZUL3 223 aa9.34□□□□□ -0.91
CKAP4-202ENST00000552828 ZNF554Q86TJ5 538 aa9.34□□□□□ -0.91
CKAP4-202ENST00000552828 COMMD1Q8N668 190 aa9.34□□□□□ -0.91
CKAP4-202ENST00000552828 OR52M1Q8NGK5 317 aa9.34□□□□□ -0.91
CKAP4-202ENST00000552828 MRPL30Q8TCC3 161 aaKnown RBP9.34□□□□□ -0.91
CKAP4-202ENST00000552828 RPEQ96AT9 228 aa9.34□□□□□ -0.91
CKAP4-202ENST00000552828 RAB3CQ96E17 227 aa9.34□□□□□ -0.91
CKAP4-202ENST00000552828 ARHGAP5-AS1Q96IT6 56 aa9.34□□□□□ -0.91
CKAP4-202ENST00000552828 NOL4LQ96MY1 436 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms