RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 CAPZA3Q96KX2 299 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 C1QTNF4Q9BXJ3 329 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 UQCC1Q9NVA1 299 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 COPZ2Q9P299 210 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 HES2Q9Y543 173 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 CHD2O14647 1828 aaKnown RBP3.19□□□□□ -1.9
USP44-208ENST00000552440 PTPRJQ12913 1337 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 TRAPPC13A5PLN9 417 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 G3V2T6 193 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 TRAPPC2LH3BP13 241 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 SAP18O00422 153 aaKnown RBP3.19□□□□□ -1.9
USP44-208ENST00000552440 COPEO14579 308 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 CYB5BO43169 146 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 ZNF207O43670 478 aaKnown RBP3.19□□□□□ -1.9
USP44-208ENST00000552440 ZNF780AO75290 641 aaPredicted RBP3.19□□□□□ -1.9
USP44-208ENST00000552440 CDRT1O95170 752 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 IGHG2P01859 326 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 IGHMP01871 453 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 RBP1P09455 135 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 RAB3AP20336 220 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 CDK2P24941 298 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 SERPINB10P48595 397 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 RAB13P51153 203 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 HLA-DRB3P79483 266 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 OR2B11Q5JQS5 317 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 C1orf194Q5T5A4 169 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 C9orf64Q5T6V5 341 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 C20orf196Q8IYI0 205 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 OR2G3Q8NGZ4 309 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 OR10G6Q8NH81 332 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 GNPDA2Q8TDQ7 276 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 TCEAL3Q969E4 200 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 SIGLEC12Q96PQ1 595 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 HSPB9Q9BQS6 159 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 ACER3Q9NUN7 267 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 SPANXCQ9NY87 97 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 DPM3Q9P2X0 92 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 SSR3Q9UNL2 185 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 RFNGQ9Y644 331 aa3.19□□□□□ -1.9
USP44-208ENST00000552440 CHD4Q14839 1912 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 A0A087WX48 190 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 TRAV8-3A0A0A6YYJ7 113 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 RPL37AP8A6NKH3 93 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 MPTX1A8MV57 137 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 DEGS1O15121 323 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 CHST10O43529 356 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 GADD45GO95257 159 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 IFNGP01579 166 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 CECR9P0C854 216 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 IGHV3-43DP0DP04 118 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 FOLR2P14207 255 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 LMO2P25791 158 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 RPL34P49207 117 aaKnown RBP3.18□□□□□ -1.9
USP44-208ENST00000552440 CTBP2P56545 445 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 TAS2R19P59542 299 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 FABP5Q01469 135 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 FAM222AQ5U5X8 452 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 LEMD1Q68G75 181 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 ZFAND6Q6FIF0 208 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 LCN8Q6JVE9 175 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 SLC25A45Q8N413 288 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 LINC00337Q8N6G1 96 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 CSNK1G2-AS1Q8NCQ2 148 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 OR4S2Q8NH73 311 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 OR5K1Q8NHB7 308 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 VN1R17PQ8TDU5 208 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 GHSRQ92847 366 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 APOBEC3DQ96AK3 386 aaPredicted RBP3.18□□□□□ -1.9
USP44-208ENST00000552440 KLF6Q99612 283 aaPredicted RBP3.18□□□□□ -1.9
USP44-208ENST00000552440 GGACTQ9BVM4 153 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 ZBP1Q9H171 429 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 AIG1Q9NVV5 245 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 MED29Q9NX70 200 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 RBM12B-AS1Q9P1G2 102 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 WASHC3Q9Y3C0 194 aa3.18□□□□□ -1.9
USP44-208ENST00000552440 LAMC1P11047 1609 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 DOCK7Q96N67 2140 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 PCNTO95613 3336 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 IGHV3-16A0A0C4DH30 117 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 IGKV1-8A0A0C4DH67 115 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 A0A0G2JN53 185 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 CCDC160A6NGH7 325 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 INMT-MINDY4F8WBC2 141 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 K7EPK0 472 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 IFNA10P01566 189 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 CRYBA1P05813 215 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 CTLA4P16410 223 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 SPI1P17947 270 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 APLNRP35414 380 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 GFERP55789 205 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 SYNJ2BPP57105 145 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 REG3AQ06141 175 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 ZNF404Q494X3 552 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 ATP6AP1LQ52LC2 224 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 FBXW12Q6X9E4 464 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 AQP11Q8NBQ7 271 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 OR8S1Q8NH09 359 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 RXFP4Q8TDU9 374 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 TMEM203Q969S6 136 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 GALMQ96C23 342 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms