RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 ZNF429Q86V71 674 aa12.51□□□□□ -0.41
CALCOCO1-220ENST00000552282 JAGN1Q8N5M9 183 aa12.51□□□□□ -0.41
CALCOCO1-220ENST00000552282 TCTEX1D1Q8N7M0 179 aa12.51□□□□□ -0.41
CALCOCO1-220ENST00000552282 MRPL30Q8TCC3 161 aaKnown RBP12.51□□□□□ -0.41
CALCOCO1-220ENST00000552282 TMEM80Q96HE8 168 aa12.51□□□□□ -0.41
CALCOCO1-220ENST00000552282 KLK15Q9H2R5 256 aa12.51□□□□□ -0.41
CALCOCO1-220ENST00000552282 GNB4Q9HAV0 340 aa12.51□□□□□ -0.41
CALCOCO1-220ENST00000552282 OR2S2Q9NQN1 319 aa12.51□□□□□ -0.41
CALCOCO1-220ENST00000552282 SMAD5-AS1Q9Y6J3 95 aa12.51□□□□□ -0.41
CALCOCO1-220ENST00000552282 STARD9Q9P2P6 4700 aa12.51□□□□□ -0.41
CALCOCO1-220ENST00000552282 RGS11O94810 467 aa12.5□□□□□ -0.41
CALCOCO1-220ENST00000552282 SLC2A2P11168 524 aaPredicted RBP12.5□□□□□ -0.41
CALCOCO1-220ENST00000552282 GNMTQ14749 295 aa12.5□□□□□ -0.41
CALCOCO1-220ENST00000552282 HMGN3Q15651 99 aa12.5□□□□□ -0.41
CALCOCO1-220ENST00000552282 OR1N2Q8NGR9 330 aa12.5□□□□□ -0.41
CALCOCO1-220ENST00000552282 MRPL20Q9BYC9 149 aaKnown RBP12.5□□□□□ -0.41
CALCOCO1-220ENST00000552282 SELENOIQ9C0D9 397 aa12.5□□□□□ -0.41
CALCOCO1-220ENST00000552282 CST11Q9H112 138 aa12.5□□□□□ -0.41
CALCOCO1-220ENST00000552282 C8orf4Q9NR00 106 aa12.5□□□□□ -0.41
CALCOCO1-220ENST00000552282 TPSG1Q9NRR2 321 aa12.5□□□□□ -0.41
CALCOCO1-220ENST00000552282 CNOT2Q9NZN8 540 aaKnown RBP12.5□□□□□ -0.41
CALCOCO1-220ENST00000552282 TRAV41A0A0B4J266 112 aa12.49□□□□□ -0.41
CALCOCO1-220ENST00000552282 EFCAB10A6NFE3 127 aa12.49□□□□□ -0.41
CALCOCO1-220ENST00000552282 G3V318 75 aa12.49□□□□□ -0.41
CALCOCO1-220ENST00000552282 ITGB1BP1O14713 200 aa12.49□□□□□ -0.41
CALCOCO1-220ENST00000552282 UBBP0CG47 229 aa12.49□□□□□ -0.41
CALCOCO1-220ENST00000552282 MYF6P23409 242 aa12.49□□□□□ -0.41
CALCOCO1-220ENST00000552282 CAPGP40121 348 aa12.49□□□□□ -0.41
CALCOCO1-220ENST00000552282 RAB9AP51151 201 aa12.49□□□□□ -0.41
CALCOCO1-220ENST00000552282 GNB1P62873 340 aa12.49□□□□□ -0.41
CALCOCO1-220ENST00000552282 TTC23Q5W5X9 447 aa12.49□□□□□ -0.41
CALCOCO1-220ENST00000552282 ZNF880Q6PDB4 577 aa12.49□□□□□ -0.41
CALCOCO1-220ENST00000552282 TMEM65Q6PI78 240 aa12.49□□□□□ -0.41
CALCOCO1-220ENST00000552282 PRR18Q8N4B5 295 aa12.49□□□□□ -0.41
CALCOCO1-220ENST00000552282 SETD9Q8NE22 299 aa12.49□□□□□ -0.41
CALCOCO1-220ENST00000552282 ZNF251Q9BRH9 671 aa12.49□□□□□ -0.41
CALCOCO1-220ENST00000552282 ANKRD60Q9BZ19 345 aa12.49□□□□□ -0.41
CALCOCO1-220ENST00000552282 IFI27L2Q9H2X8 130 aa12.49□□□□□ -0.41
CALCOCO1-220ENST00000552282 KCNIP1Q9NZI2 227 aa12.49□□□□□ -0.41
CALCOCO1-220ENST00000552282 DNAH1Q9P2D7 4330 aa12.49□□□□□ -0.41
CALCOCO1-220ENST00000552282 SAA2-SAA4A0A096LPE2 208 aa12.48□□□□□ -0.41
CALCOCO1-220ENST00000552282 SAA2P0DJI9 122 aaPredicted RBP12.48□□□□□ -0.41
CALCOCO1-220ENST00000552282 CD37P11049 281 aa12.48□□□□□ -0.41
CALCOCO1-220ENST00000552282 MAPK3P27361 379 aaPredicted RBP12.48□□□□□ -0.41
CALCOCO1-220ENST00000552282 PPP1CCP36873 323 aaKnown RBP12.48□□□□□ -0.41
CALCOCO1-220ENST00000552282 NDPQ00604 133 aa12.48□□□□□ -0.41
CALCOCO1-220ENST00000552282 ZNF660Q6AZW8 331 aaPredicted RBP12.48□□□□□ -0.41
CALCOCO1-220ENST00000552282 CD200R1LQ6Q8B3 271 aa12.48□□□□□ -0.41
CALCOCO1-220ENST00000552282 PACRGLQ8N7B6 248 aa12.48□□□□□ -0.41
CALCOCO1-220ENST00000552282 OR52L2PQ8NGH6 319 aa12.48□□□□□ -0.41
CALCOCO1-220ENST00000552282 GALMQ96C23 342 aa12.48□□□□□ -0.41
CALCOCO1-220ENST00000552282 RITA1Q96K30 269 aa12.48□□□□□ -0.41
CALCOCO1-220ENST00000552282 GHITMQ9H3K2 345 aa12.48□□□□□ -0.41
CALCOCO1-220ENST00000552282 BANF2Q9H503 90 aa12.48□□□□□ -0.41
CALCOCO1-220ENST00000552282 ISYNA1Q9NPH2 558 aa12.48□□□□□ -0.41
CALCOCO1-220ENST00000552282 OVOL1O14753 267 aa12.47□□□□□ -0.41
CALCOCO1-220ENST00000552282 SOX15O60248 233 aa12.47□□□□□ -0.41
CALCOCO1-220ENST00000552282 CRTAPO75718 401 aaPredicted RBP12.47□□□□□ -0.41
CALCOCO1-220ENST00000552282 NAPSAO96009 420 aa12.47□□□□□ -0.41
CALCOCO1-220ENST00000552282 MAS1P04201 325 aa12.47□□□□□ -0.41
CALCOCO1-220ENST00000552282 CNTFRP26992 372 aa12.47□□□□□ -0.41
CALCOCO1-220ENST00000552282 BLVRBP30043 206 aaPredicted RBP12.47□□□□□ -0.41
CALCOCO1-220ENST00000552282 ST3GAL4Q11206 333 aa12.47□□□□□ -0.41
CALCOCO1-220ENST00000552282 LRRC36Q1X8D7 754 aa12.47□□□□□ -0.41
CALCOCO1-220ENST00000552282 FAM27D1Q5T7N8 215 aa12.47□□□□□ -0.41
CALCOCO1-220ENST00000552282 PYHIN1Q6K0P9 492 aa12.47□□□□□ -0.41
CALCOCO1-220ENST00000552282 LIN54Q6MZP7 749 aa12.47□□□□□ -0.41
CALCOCO1-220ENST00000552282 ZFP41Q8N8Y5 198 aa12.47□□□□□ -0.41
CALCOCO1-220ENST00000552282 OR2AK2Q8NG84 335 aa12.47□□□□□ -0.41
CALCOCO1-220ENST00000552282 FBLIM1Q8WUP2 373 aa12.47□□□□□ -0.41
CALCOCO1-220ENST00000552282 GGHQ92820 318 aa12.47□□□□□ -0.41
CALCOCO1-220ENST00000552282 RBMXL1Q96E39 390 aaKnown RBP12.47□□□□□ -0.41
CALCOCO1-220ENST00000552282 TM2D1Q9BX74 207 aa12.47□□□□□ -0.41
CALCOCO1-220ENST00000552282 TOLLIPQ9H0E2 274 aa12.47□□□□□ -0.41
CALCOCO1-220ENST00000552282 PARP11Q9NR21 331 aa12.47□□□□□ -0.41
CALCOCO1-220ENST00000552282 PLCXD1Q9NUJ7 323 aa12.47□□□□□ -0.41
CALCOCO1-220ENST00000552282 PIPOXQ9P0Z9 390 aa12.47□□□□□ -0.41
CALCOCO1-220ENST00000552282 WSB1Q9Y6I7 421 aa12.47□□□□□ -0.41
CALCOCO1-220ENST00000552282 TRBV6-6A0A0A6YYG2 114 aa12.46□□□□□ -0.41
CALCOCO1-220ENST00000552282 UBE2QL1A1L167 161 aa12.46□□□□□ -0.41
CALCOCO1-220ENST00000552282 OR5H14A6NHG9 310 aa12.46□□□□□ -0.41
CALCOCO1-220ENST00000552282 ARPC1BO15143 372 aaKnown RBP12.46□□□□□ -0.41
CALCOCO1-220ENST00000552282 RBBP9O75884 186 aa12.46□□□□□ -0.41
CALCOCO1-220ENST00000552282 LGALS1P09382 135 aaKnown RBP12.46□□□□□ -0.41
CALCOCO1-220ENST00000552282 WNT4P56705 351 aa12.46□□□□□ -0.41
CALCOCO1-220ENST00000552282 C1orf100Q5SVJ3 147 aa12.46□□□□□ -0.41
CALCOCO1-220ENST00000552282 MOB1BQ7L9L4 216 aa12.46□□□□□ -0.41
CALCOCO1-220ENST00000552282 SVOPQ8N4V2 548 aa12.46□□□□□ -0.41
CALCOCO1-220ENST00000552282 PHYHIPQ92561 330 aa12.46□□□□□ -0.41
CALCOCO1-220ENST00000552282 DCUN1D4Q92564 292 aa12.46□□□□□ -0.41
CALCOCO1-220ENST00000552282 CYYR1Q96J86 154 aa12.46□□□□□ -0.41
CALCOCO1-220ENST00000552282 RNF5Q99942 180 aa12.46□□□□□ -0.41
CALCOCO1-220ENST00000552282 KIAA1456Q9P272 454 aa12.46□□□□□ -0.41
CALCOCO1-220ENST00000552282 FOXA2Q9Y261 457 aaPredicted RBP12.46□□□□□ -0.41
CALCOCO1-220ENST00000552282 ERGIC3Q9Y282 383 aa12.46□□□□□ -0.41
CALCOCO1-220ENST00000552282 FBXO7Q9Y3I1 522 aa12.46□□□□□ -0.41
CALCOCO1-220ENST00000552282 NUBP2Q9Y5Y2 271 aa12.46□□□□□ -0.41
CALCOCO1-220ENST00000552282 RRHO14718 337 aa12.45□□□□□ -0.42
CALCOCO1-220ENST00000552282 RAB29O14966 203 aa12.45□□□□□ -0.42
CALCOCO1-220ENST00000552282 RPS27AP62979 156 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms