RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 RAMP3O60896 148 aa12.91□□□□□ -0.34
SSH1-208ENST00000548522 PFDN1O60925 122 aa12.91□□□□□ -0.34
SSH1-208ENST00000548522 HLA-DQB1P01920 261 aa12.91□□□□□ -0.34
SSH1-208ENST00000548522 GPR12P47775 334 aa12.91□□□□□ -0.34
SSH1-208ENST00000548522 RPS11P62280 158 aaKnown RBP eCLIP12.91□□□□□ -0.34
SSH1-208ENST00000548522 ALKBH1Q13686 389 aaKnown RBP12.91□□□□□ -0.34
SSH1-208ENST00000548522 ZNF79Q15937 498 aa12.91□□□□□ -0.34
SSH1-208ENST00000548522 PAN3Q58A45 887 aaKnown RBP12.91□□□□□ -0.34
SSH1-208ENST00000548522 FAM53AQ6NSI3 398 aaPredicted RBP12.91□□□□□ -0.34
SSH1-208ENST00000548522 FOXRED2Q8IWF2 684 aa12.91□□□□□ -0.34
SSH1-208ENST00000548522 TRBV5-5A0A0J9YX44 114 aa12.9□□□□□ -0.34
SSH1-208ENST00000548522 FABP12A6NFH5 140 aa12.9□□□□□ -0.34
SSH1-208ENST00000548522 NPIPB11E5RHQ5 1161 aa12.9□□□□□ -0.34
SSH1-208ENST00000548522 HSD17B6O14756 317 aa12.9□□□□□ -0.34
SSH1-208ENST00000548522 APOA1P02647 267 aa12.9□□□□□ -0.34
SSH1-208ENST00000548522 TMEM225BP0DP42 221 aa12.9□□□□□ -0.34
SSH1-208ENST00000548522 RAB3BP20337 219 aa12.9□□□□□ -0.34
SSH1-208ENST00000548522 ECI1P42126 302 aa12.9□□□□□ -0.34
SSH1-208ENST00000548522 RAB7AP51149 207 aa12.9□□□□□ -0.34
SSH1-208ENST00000548522 SCAND1P57086 179 aa12.9□□□□□ -0.34
SSH1-208ENST00000548522 HACD4Q5VWC8 232 aa12.9□□□□□ -0.34
SSH1-208ENST00000548522 RSBN1Q5VWQ0 802 aaPredicted RBP12.9□□□□□ -0.34
SSH1-208ENST00000548522 SFXN4Q6P4A7 337 aa12.9□□□□□ -0.34
SSH1-208ENST00000548522 SAXO1Q8IYX7 474 aa12.9□□□□□ -0.34
SSH1-208ENST00000548522 OR8H3Q8N146 312 aa12.9□□□□□ -0.34
SSH1-208ENST00000548522 COMMD1Q8N668 190 aa12.9□□□□□ -0.34
SSH1-208ENST00000548522 DIRAS2Q96HU8 199 aa12.9□□□□□ -0.34
SSH1-208ENST00000548522 EAF1Q96JC9 268 aaPredicted RBP12.9□□□□□ -0.34
SSH1-208ENST00000548522 LINC00574Q9H8X3 128 aa12.9□□□□□ -0.34
SSH1-208ENST00000548522 GAR1Q9NY12 217 aaKnown RBP12.9□□□□□ -0.34
SSH1-208ENST00000548522 OR4C45A6NMZ5 311 aa12.89□□□□□ -0.35
SSH1-208ENST00000548522 SEC14L6B5MCN3 397 aa12.89□□□□□ -0.35
SSH1-208ENST00000548522 TPPPO94811 219 aa12.89□□□□□ -0.35
SSH1-208ENST00000548522 BCAP31P51572 246 aa12.89□□□□□ -0.35
SSH1-208ENST00000548522 PSMD7P51665 324 aa12.89□□□□□ -0.35
SSH1-208ENST00000548522 KISS1Q15726 138 aa12.89□□□□□ -0.35
SSH1-208ENST00000548522 PIGYQ3MUY2 71 aa12.89□□□□□ -0.35
SSH1-208ENST00000548522 Q499Y3 187 aa12.89□□□□□ -0.35
SSH1-208ENST00000548522 HSD17B12Q53GQ0 312 aa12.89□□□□□ -0.35
SSH1-208ENST00000548522 TEX38Q6PEX7 206 aa12.89□□□□□ -0.35
SSH1-208ENST00000548522 Q8N6K4 173 aa12.89□□□□□ -0.35
SSH1-208ENST00000548522 OR5M8Q8NGP6 311 aa12.89□□□□□ -0.35
SSH1-208ENST00000548522 OR10K1Q8NGX5 313 aa12.89□□□□□ -0.35
SSH1-208ENST00000548522 OR10X1Q8NGY0 326 aa12.89□□□□□ -0.35
SSH1-208ENST00000548522 OR8U1Q8NH10 309 aa12.89□□□□□ -0.35
SSH1-208ENST00000548522 UBALD1Q8TB05 177 aa12.89□□□□□ -0.35
SSH1-208ENST00000548522 IGHV1-3A0A0C4DH29 117 aa12.88□□□□□ -0.35
SSH1-208ENST00000548522 NCBP2LA6PVI3 153 aaKnown RBP12.88□□□□□ -0.35
SSH1-208ENST00000548522 C3orf84H3BNL1 204 aa12.88□□□□□ -0.35
SSH1-208ENST00000548522 AP4M1O00189 453 aa12.88□□□□□ -0.35
SSH1-208ENST00000548522 HCKP08631 526 aa12.88□□□□□ -0.35
SSH1-208ENST00000548522 ASAH1Q13510 395 aa12.88□□□□□ -0.35
SSH1-208ENST00000548522 C9orf66Q5T8R8 295 aa12.88□□□□□ -0.35
SSH1-208ENST00000548522 FAM131AQ6UXB0 335 aa12.88□□□□□ -0.35
SSH1-208ENST00000548522 MOB3BQ86TA1 216 aa12.88□□□□□ -0.35
SSH1-208ENST00000548522 ZNF565Q8N9K5 539 aa12.88□□□□□ -0.35
SSH1-208ENST00000548522 Q8N9W7 124 aa12.88□□□□□ -0.35
SSH1-208ENST00000548522 POC5Q8NA72 575 aa12.88□□□□□ -0.35
SSH1-208ENST00000548522 CHAC2Q8WUX2 184 aa12.88□□□□□ -0.35
SSH1-208ENST00000548522 HSPB9Q9BQS6 159 aa12.88□□□□□ -0.35
SSH1-208ENST00000548522 ABCG5Q9H222 651 aa12.88□□□□□ -0.35
SSH1-208ENST00000548522 RHOFQ9HBH0 211 aa12.88□□□□□ -0.35
SSH1-208ENST00000548522 ETAA1Q9NY74 926 aa12.88□□□□□ -0.35
SSH1-208ENST00000548522 ZMAT5Q9UDW3 170 aaKnown RBP12.88□□□□□ -0.35
SSH1-208ENST00000548522 CSMD3Q7Z407 3707 aa12.88□□□□□ -0.35
SSH1-208ENST00000548522 ZNF736B4DX44 427 aaPredicted RBP12.87□□□□□ -0.35
SSH1-208ENST00000548522 ZFPL1O95159 310 aa12.87□□□□□ -0.35
SSH1-208ENST00000548522 IL7P13232 177 aa12.87□□□□□ -0.35
SSH1-208ENST00000548522 CFHR3Q02985 330 aa12.87□□□□□ -0.35
SSH1-208ENST00000548522 ZNF816Q0VGE8 651 aaPredicted RBP12.87□□□□□ -0.35
SSH1-208ENST00000548522 EBI3Q14213 229 aa12.87□□□□□ -0.35
SSH1-208ENST00000548522 INSL4Q14641 139 aa12.87□□□□□ -0.35
SSH1-208ENST00000548522 KIR2DS1Q14954 304 aa12.87□□□□□ -0.35
SSH1-208ENST00000548522 PNLIPRP3Q17RR3 467 aa12.87□□□□□ -0.35
SSH1-208ENST00000548522 CXorf66Q5JRM2 361 aaPredicted RBP12.87□□□□□ -0.35
SSH1-208ENST00000548522 ZNF554Q86TJ5 538 aa12.87□□□□□ -0.35
SSH1-208ENST00000548522 TGIF2LXQ8IUE1 241 aa12.87□□□□□ -0.35
SSH1-208ENST00000548522 IZUMO1Q8IYV9 350 aa12.87□□□□□ -0.35
SSH1-208ENST00000548522 RNF152Q8N8N0 203 aa12.87□□□□□ -0.35
SSH1-208ENST00000548522 OR5AK2Q8NH90 309 aa12.87□□□□□ -0.35
SSH1-208ENST00000548522 DERL3Q96Q80 235 aa12.87□□□□□ -0.35
SSH1-208ENST00000548522 TRBV5-7A0A0A0MS05 114 aa12.86□□□□□ -0.35
SSH1-208ENST00000548522 SULT1B1O43704 296 aa12.86□□□□□ -0.35
SSH1-208ENST00000548522 TALDO1P37837 337 aa12.86□□□□□ -0.35
SSH1-208ENST00000548522 FOXE3Q13461 319 aa12.86□□□□□ -0.35
SSH1-208ENST00000548522 FHL3Q13643 280 aa12.86□□□□□ -0.35
SSH1-208ENST00000548522 CASC10Q5T4H9 136 aa12.86□□□□□ -0.35
SSH1-208ENST00000548522 ELP2Q6IA86 826 aa12.86□□□□□ -0.35
SSH1-208ENST00000548522 CNIH2Q6PI25 160 aa12.86□□□□□ -0.35
SSH1-208ENST00000548522 NR2C2APQ86WQ0 139 aa12.86□□□□□ -0.35
SSH1-208ENST00000548522 TMEM104Q8NE00 496 aa12.86□□□□□ -0.35
SSH1-208ENST00000548522 OR51A2Q8NGJ7 313 aa12.86□□□□□ -0.35
SSH1-208ENST00000548522 GPR148Q8TDV2 347 aa12.86□□□□□ -0.35
SSH1-208ENST00000548522 PLSCR3Q9NRY6 295 aa12.86□□□□□ -0.35
SSH1-208ENST00000548522 LIN7CQ9NUP9 197 aaKnown RBP12.86□□□□□ -0.35
SSH1-208ENST00000548522 COMMD3Q9UBI1 195 aa12.86□□□□□ -0.35
SSH1-208ENST00000548522 SPATA2Q9UM82 520 aa12.86□□□□□ -0.35
SSH1-208ENST00000548522 AIPO00170 330 aa12.85□□□□□ -0.35
SSH1-208ENST00000548522 HPGDSO60760 199 aa12.85□□□□□ -0.35
SSH1-208ENST00000548522 SRMP19623 302 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms