RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 B9A039 149 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 IGKV3-11P04433 115 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 HIST1H1BP16401 226 aaKnown RBP7.47□□□□□ -1.21
CLIP1-218ENST00000545889 ACAA2P42765 397 aaKnown RBP7.47□□□□□ -1.21
CLIP1-218ENST00000545889 CDKN2AP42771 156 aaKnown RBP7.47□□□□□ -1.21
CLIP1-218ENST00000545889 LYZP61626 148 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 SRSF3P84103 164 aaKnown RBP7.47□□□□□ -1.21
CLIP1-218ENST00000545889 APCDD1LQ8NCL9 501 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 C17orf47Q8NEP4 570 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 MARCH1Q8TCQ1 289 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 ADIPOR1Q96A54 375 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 HARBI1Q96MB7 349 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 P2RX4Q99571 388 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 NEUROG3Q9Y4Z2 214 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 CEP295Q9C0D2 2601 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 IGHV3OR16-10A0A075B7F0 116 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 H2AFB1P0C5Y9 115 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 COX6A1P12074 109 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 KIR2DS2P43631 304 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 CDX1P47902 265 aaPredicted RBP7.47□□□□□ -1.21
CLIP1-218ENST00000545889 TFPI2P48307 235 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 CRYBA2P53672 197 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 IGLV3-21P80748 117 aaPredicted RBP7.47□□□□□ -1.21
CLIP1-218ENST00000545889 CEBPEQ15744 281 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 PNLIPRP3Q17RR3 467 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 EIF4E3Q8N5X7 224 aaKnown RBP7.47□□□□□ -1.21
CLIP1-218ENST00000545889 Q8WTZ3 238 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 NRIP2Q9BQI9 281 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 NIPSNAP3BQ9BS92 247 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 POFUT1Q9H488 388 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 KLK13Q9UKR3 277 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 IGKV3D-11A0A0A0MRZ8 115 aa7.46□□□□□ -1.21
CLIP1-218ENST00000545889 SNRPGP15A8MWD9 76 aa7.46□□□□□ -1.21
CLIP1-218ENST00000545889 XRCC3O43542 346 aa7.46□□□□□ -1.21
CLIP1-218ENST00000545889 ZG16O60844 167 aa7.46□□□□□ -1.21
CLIP1-218ENST00000545889 UPK3AO75631 287 aa7.46□□□□□ -1.21
CLIP1-218ENST00000545889 FGF9P31371 208 aaPredicted RBP7.46□□□□□ -1.21
CLIP1-218ENST00000545889 MMP15P51511 669 aa7.46□□□□□ -1.21
CLIP1-218ENST00000545889 ZNRF4Q8WWF5 429 aa7.46□□□□□ -1.21
CLIP1-218ENST00000545889 GNPNAT1Q96EK6 184 aaPredicted RBP7.46□□□□□ -1.21
CLIP1-218ENST00000545889 FAAP24Q9BTP7 215 aa7.46□□□□□ -1.21
CLIP1-218ENST00000545889 ASCL3Q9NQ33 180 aa7.46□□□□□ -1.21
CLIP1-218ENST00000545889 MMP26Q9NRE1 261 aa7.46□□□□□ -1.21
CLIP1-218ENST00000545889 WNK1Q9H4A3 2382 aa7.46□□□□□ -1.21
CLIP1-218ENST00000545889 H0Y8G0 127 aa7.46□□□□□ -1.22
CLIP1-218ENST00000545889 OR2J3O76001 311 aa7.46□□□□□ -1.22
CLIP1-218ENST00000545889 REG1BP48304 166 aa7.46□□□□□ -1.22
CLIP1-218ENST00000545889 CDPF1Q6NVV7 123 aa7.46□□□□□ -1.22
CLIP1-218ENST00000545889 GPA33Q99795 319 aa7.46□□□□□ -1.22
CLIP1-218ENST00000545889 ADGRL4Q9HBW9 690 aa7.46□□□□□ -1.22
CLIP1-218ENST00000545889 VSIG4Q9Y279 399 aa7.46□□□□□ -1.22
CLIP1-218ENST00000545889 NME2P1O60361 137 aa7.46□□□□□ -1.22
CLIP1-218ENST00000545889 CLDN14O95500 239 aa7.46□□□□□ -1.22
CLIP1-218ENST00000545889 UMODP07911 640 aa7.46□□□□□ -1.22
CLIP1-218ENST00000545889 SLC25A4P12235 298 aa7.46□□□□□ -1.22
CLIP1-218ENST00000545889 MUC1P15941 1255 aaPredicted RBP7.46□□□□□ -1.22
CLIP1-218ENST00000545889 NCR3LG1Q68D85 454 aa7.46□□□□□ -1.22
CLIP1-218ENST00000545889 MRPL14Q6P1L8 145 aaKnown RBP7.46□□□□□ -1.22
CLIP1-218ENST00000545889 ATG4DQ86TL0 474 aaPredicted RBP7.46□□□□□ -1.22
CLIP1-218ENST00000545889 OR5A2Q8NGI9 324 aa7.46□□□□□ -1.22
CLIP1-218ENST00000545889 OR5M8Q8NGP6 311 aa7.46□□□□□ -1.22
CLIP1-218ENST00000545889 SMIM4Q8WVI0 70 aa7.46□□□□□ -1.22
CLIP1-218ENST00000545889 DMRTA2Q96SC8 542 aa7.46□□□□□ -1.22
CLIP1-218ENST00000545889 ISG20L2Q9H9L3 353 aaKnown RBP7.46□□□□□ -1.22
CLIP1-218ENST00000545889 ELOVL5Q9NYP7 299 aa7.46□□□□□ -1.22
CLIP1-218ENST00000545889 METRNQ9UJH8 293 aa7.46□□□□□ -1.22
CLIP1-218ENST00000545889 FOXJ3Q9UPW0 622 aa7.46□□□□□ -1.22
CLIP1-218ENST00000545889 GYPAP02724 150 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 ORM2P19652 201 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 CNN1P51911 297 aaKnown RBP7.45□□□□□ -1.22
CLIP1-218ENST00000545889 H2BFSP57053 126 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 TCF15Q12870 199 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 ASB10Q8WXI3 467 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 LOC105371242A0A075B767 164 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 TMEM210A6NLX4 147 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 GAPDHP04406 335 aaKnown RBP7.45□□□□□ -1.22
CLIP1-218ENST00000545889 RPS4Y1P22090 263 aaKnown RBP7.45□□□□□ -1.22
CLIP1-218ENST00000545889 SULT1A1P50225 295 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 HMGA2P52926 109 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 FAM27E3Q08E93 113 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 HMGN3Q15651 99 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 PLPPR5Q32ZL2 321 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 TMEM41BQ5BJD5 291 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 PLA2G2CQ5R387 149 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 SLC25A42Q86VD7 318 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 FADS6Q8N9I5 356 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 ZNF714Q96N38 554 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 PRSS50Q9UI38 385 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 WIPI2Q9Y4P8 454 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 ARRDC5A6NEK1 342 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 OOEPA6NGQ2 149 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 COLCA2A8K830 154 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 TSPAN2O60636 221 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 C6orf201Q7Z4U5 140 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 MARS2Q96GW9 593 aaKnown RBP7.45□□□□□ -1.22
CLIP1-218ENST00000545889 SNX22Q96L94 193 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 DERL3Q96Q80 235 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 TAF9BQ9HBM6 251 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 PIPOXQ9P0Z9 390 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 PLXND1Q9Y4D7 1925 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms