RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 Q8N6K4 173 aa18.47■□□□□ 0.55
CHFR-222ENST00000544093 CHPT1Q8WUD6 406 aa18.47■□□□□ 0.55
CHFR-222ENST00000544093 LIN7CQ9NUP9 197 aaKnown RBP18.47■□□□□ 0.55
CHFR-222ENST00000544093 AK3Q9UIJ7 227 aa18.47■□□□□ 0.55
CHFR-222ENST00000544093 CMYA5Q8N3K9 4069 aa18.46■□□□□ 0.55
CHFR-222ENST00000544093 IGHV3-72A0A0B4J1Y9 119 aa18.46■□□□□ 0.55
CHFR-222ENST00000544093 NCBP2LA6PVI3 153 aaKnown RBP18.46■□□□□ 0.55
CHFR-222ENST00000544093 LDLRAD4O15165 306 aa18.46■□□□□ 0.55
CHFR-222ENST00000544093 FGF9P31371 208 aaPredicted RBP18.46■□□□□ 0.55
CHFR-222ENST00000544093 VEGFCP49767 419 aa18.46■□□□□ 0.55
CHFR-222ENST00000544093 GNMTQ14749 295 aa18.46■□□□□ 0.55
CHFR-222ENST00000544093 HES5Q5TA89 166 aa18.46■□□□□ 0.55
CHFR-222ENST00000544093 FOXRED2Q8IWF2 684 aa18.46■□□□□ 0.55
CHFR-222ENST00000544093 SETD6Q8TBK2 473 aa18.46■□□□□ 0.55
CHFR-222ENST00000544093 IL1F10Q8WWZ1 152 aa18.46■□□□□ 0.55
CHFR-222ENST00000544093 GHITMQ9H3K2 345 aa18.46■□□□□ 0.55
CHFR-222ENST00000544093 TSSC4Q9Y5U2 329 aaPredicted RBP18.46■□□□□ 0.55
CHFR-222ENST00000544093 SH2D7A6NKC9 451 aaPredicted RBP18.45■□□□□ 0.54
CHFR-222ENST00000544093 DEFA6Q01524 100 aa18.45■□□□□ 0.54
CHFR-222ENST00000544093 FAM71F2Q6NXP2 309 aa18.45■□□□□ 0.54
CHFR-222ENST00000544093 ZNF773Q6PK81 442 aa18.45■□□□□ 0.54
CHFR-222ENST00000544093 R3HDM4Q96D70 268 aa18.45■□□□□ 0.54
CHFR-222ENST00000544093 TMEM272A0A1B0GTI8 110 aa18.44■□□□□ 0.54
CHFR-222ENST00000544093 TCRBV4S1A1TA0A5B7 111 aa18.44■□□□□ 0.54
CHFR-222ENST00000544093 PSMB11A5LHX3 300 aa18.44■□□□□ 0.54
CHFR-222ENST00000544093 IGHG2P01859 326 aa18.44■□□□□ 0.54
CHFR-222ENST00000544093 RAB6AP20340 208 aa18.44■□□□□ 0.54
CHFR-222ENST00000544093 GADD45AP24522 165 aa18.44■□□□□ 0.54
CHFR-222ENST00000544093 TMEM50BP56557 158 aa18.44■□□□□ 0.54
CHFR-222ENST00000544093 MRPS15P82914 257 aaKnown RBP18.44■□□□□ 0.54
CHFR-222ENST00000544093 LSAMPQ13449 338 aa18.44■□□□□ 0.54
CHFR-222ENST00000544093 C22orf42Q6IC83 251 aa18.44■□□□□ 0.54
CHFR-222ENST00000544093 SLC35E3Q7Z769 313 aa18.44■□□□□ 0.54
CHFR-222ENST00000544093 PTX4Q96A99 478 aa18.44■□□□□ 0.54
CHFR-222ENST00000544093 ARHGAP5-AS1Q96IT6 56 aa18.44■□□□□ 0.54
CHFR-222ENST00000544093 CYYR1Q96J86 154 aa18.44■□□□□ 0.54
CHFR-222ENST00000544093 CMSS1Q9BQ75 279 aaKnown RBP18.44■□□□□ 0.54
CHFR-222ENST00000544093 PECRQ9BY49 303 aa18.44■□□□□ 0.54
CHFR-222ENST00000544093 PIPOXQ9P0Z9 390 aa18.44■□□□□ 0.54
CHFR-222ENST00000544093 STUB1Q9UNE7 303 aa18.44■□□□□ 0.54
CHFR-222ENST00000544093 ADARB2-AS1A8MUL3 147 aa18.43■□□□□ 0.54
CHFR-222ENST00000544093 SERPINE3A8MV23 424 aa18.43■□□□□ 0.54
CHFR-222ENST00000544093 ITGB1BP1O14713 200 aa18.43■□□□□ 0.54
CHFR-222ENST00000544093 KCNAB3O43448 404 aa18.43■□□□□ 0.54
CHFR-222ENST00000544093 ZBTB25P24278 435 aa18.43■□□□□ 0.54
CHFR-222ENST00000544093 SLC35B1P78383 322 aa18.43■□□□□ 0.54
CHFR-222ENST00000544093 HLA-DRB3P79483 266 aa18.43■□□□□ 0.54
CHFR-222ENST00000544093 ZNF833PQ6ZTB9 187 aa18.43■□□□□ 0.54
CHFR-222ENST00000544093 EDARADDQ8WWZ3 215 aa18.43■□□□□ 0.54
CHFR-222ENST00000544093 RASL11BQ9BPW5 248 aa18.43■□□□□ 0.54
CHFR-222ENST00000544093 GON7Q9BXV9 100 aa18.43■□□□□ 0.54
CHFR-222ENST00000544093 ABCG5Q9H222 651 aa18.43■□□□□ 0.54
CHFR-222ENST00000544093 RRP15Q9Y3B9 282 aaKnown RBP18.43■□□□□ 0.54
CHFR-222ENST00000544093 SHISA3A0PJX4 238 aa18.42■□□□□ 0.54
CHFR-222ENST00000544093 METTL21EPA6NDL7 271 aa18.42■□□□□ 0.54
CHFR-222ENST00000544093 PLXNB1O43157 2135 aa18.42■□□□□ 0.54
CHFR-222ENST00000544093 OR10A3P58181 314 aa18.42■□□□□ 0.54
CHFR-222ENST00000544093 HIST2H2BDQ6DRA6 164 aa18.42■□□□□ 0.54
CHFR-222ENST00000544093 TPRA1Q86W33 373 aa18.42■□□□□ 0.54
CHFR-222ENST00000544093 ODF3L1Q8IXM7 274 aa18.42■□□□□ 0.54
CHFR-222ENST00000544093 COMMD1Q8N668 190 aa18.42■□□□□ 0.54
CHFR-222ENST00000544093 RAB3CQ96E17 227 aa18.42■□□□□ 0.54
CHFR-222ENST00000544093 S1PR3Q99500 378 aa18.42■□□□□ 0.54
CHFR-222ENST00000544093 Q9N2K0 584 aa18.42■□□□□ 0.54
CHFR-222ENST00000544093 TXNL4BQ9NX01 149 aaKnown RBP18.42■□□□□ 0.54
CHFR-222ENST00000544093 SLC23A1Q9UHI7 598 aa18.42■□□□□ 0.54
CHFR-222ENST00000544093 SSR3Q9UNL2 185 aa18.42■□□□□ 0.54
CHFR-222ENST00000544093 AP4M1O00189 453 aa18.41■□□□□ 0.54
CHFR-222ENST00000544093 RAB29O14966 203 aa18.41■□□□□ 0.54
CHFR-222ENST00000544093 HSPA12AO43301 675 aa18.41■□□□□ 0.54
CHFR-222ENST00000544093 ARL6IP1Q15041 203 aa18.41■□□□□ 0.54
CHFR-222ENST00000544093 KCTD21Q4G0X4 260 aa18.41■□□□□ 0.54
CHFR-222ENST00000544093 PLAC9Q5JTB6 97 aa18.41■□□□□ 0.54
CHFR-222ENST00000544093 Q6ZPA2 131 aa18.41■□□□□ 0.54
CHFR-222ENST00000544093 Q8N9W7 124 aa18.41■□□□□ 0.54
CHFR-222ENST00000544093 HDHD3Q9BSH5 251 aaPredicted RBP18.41■□□□□ 0.54
CHFR-222ENST00000544093 IFI27L2Q9H2X8 130 aa18.41■□□□□ 0.54
CHFR-222ENST00000544093 PLSCR3Q9NRY6 295 aa18.41■□□□□ 0.54
CHFR-222ENST00000544093 SAA2-SAA4A0A096LPE2 208 aa18.4■□□□□ 0.54
CHFR-222ENST00000544093 ZNF736B4DX44 427 aaPredicted RBP18.4■□□□□ 0.54
CHFR-222ENST00000544093 CD3GP09693 182 aa18.4■□□□□ 0.54
CHFR-222ENST00000544093 SAA2P0DJI9 122 aaPredicted RBP18.4■□□□□ 0.54
CHFR-222ENST00000544093 PF4V1P10720 104 aa18.4■□□□□ 0.54
CHFR-222ENST00000544093 TCTEX1D4Q5JR98 221 aa18.4■□□□□ 0.54
CHFR-222ENST00000544093 C5orf24Q7Z6I8 188 aa18.4■□□□□ 0.54
CHFR-222ENST00000544093 FAM71E2Q8N5Q1 922 aa18.4■□□□□ 0.54
CHFR-222ENST00000544093 OR10R2Q8NGX6 335 aa18.4■□□□□ 0.54
CHFR-222ENST00000544093 CENPOQ9BU64 300 aa18.4■□□□□ 0.54
CHFR-222ENST00000544093 NOTOA8MTQ0 251 aa18.39■□□□□ 0.53
CHFR-222ENST00000544093 WIPF1O43516 503 aa18.39■□□□□ 0.53
CHFR-222ENST00000544093 RRP9O43818 475 aaKnown RBP18.39■□□□□ 0.53
CHFR-222ENST00000544093 GPR12P47775 334 aa18.39■□□□□ 0.53
CHFR-222ENST00000544093 SERPINB10P48595 397 aa18.39■□□□□ 0.53
CHFR-222ENST00000544093 STPG2Q8N412 459 aa18.39■□□□□ 0.53
CHFR-222ENST00000544093 NABP2Q9BQ15 211 aa18.39■□□□□ 0.53
CHFR-222ENST00000544093 MRPL20Q9BYC9 149 aaKnown RBP18.39■□□□□ 0.53
CHFR-222ENST00000544093 TRDCB7Z8K6 153 aa18.38■□□□□ 0.53
CHFR-222ENST00000544093 DIRAS3O95661 229 aa18.38■□□□□ 0.53
CHFR-222ENST00000544093 SLC6A1P30531 599 aa18.38■□□□□ 0.53
CHFR-222ENST00000544093 CEACAM6P40199 344 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms