RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 RASL11BQ9BPW5 248 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 CHCHD6Q9BRQ6 235 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 FUNDC2Q9BWH2 189 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 BARHL1Q9BZE3 327 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 CST11Q9H112 138 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 ALX4Q9H161 411 aaPredicted RBP5.14□□□□□ -1.59
CD44-221ENST00000526000 METTL9Q9H1A3 318 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 OR51E2Q9H255 320 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 GNB4Q9HAV0 340 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 ING4Q9UNL4 249 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 SMAD5-AS1Q9Y6J3 95 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 V9GY05 133 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 DSCAML1Q8TD84 2053 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 COL7A1Q02388 2944 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 A0A087X0M5 115 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 LOC100506127A0A0U1RQW1 187 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 A0A1B0GX30 115 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 FAM90A10PA6NDY2 464 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 FAM90A7PA6NKC0 464 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 FAM90A23PA8MXZ1 464 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 G3V318 75 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 AIPO00170 330 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 HSD17B6O14756 317 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 SLC31A2O15432 143 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 FGF16O43320 207 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 SCGNO76038 276 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 CDRT1O95170 752 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 MAS1P04201 325 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 VDAC1P21796 283 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 HTR2CP28335 458 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 CDX1P47902 265 aaPredicted RBP5.13□□□□□ -1.59
CD44-221ENST00000526000 ZP1P60852 638 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 IL13RA2Q14627 380 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 RAB11BQ15907 218 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 SRSF7Q16629 238 aaKnown RBP eCLIP5.13□□□□□ -1.59
CD44-221ENST00000526000 ATAD3CQ5T2N8 411 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 GPR107Q5VW38 600 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 RSBN1Q5VWQ0 802 aaPredicted RBP5.13□□□□□ -1.59
CD44-221ENST00000526000 ADAMTSL5Q6ZMM2 481 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 HAPLN4Q86UW8 402 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 OR8H3Q8N146 312 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 JAGN1Q8N5M9 183 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 SUMF2Q8NBJ7 301 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 OR10V1Q8NGI7 309 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 OR51T1Q8NGJ9 327 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 OR2T10Q8NGZ9 312 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 OR8U1Q8NH10 309 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 KCNG3Q8TAE7 436 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 NEK7Q8TDX7 302 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 TNFAIP8L1Q8WVP5 186 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 DCUN1D4Q92564 292 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 PTX4Q96A99 478 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 ORAI1Q96D31 301 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 RITA1Q96K30 269 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 S1PR3Q99500 378 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 ABCG5Q9H222 651 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 PLGRKTQ9HBL7 147 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 SPACA1Q9HBV2 294 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 BATF3Q9NR55 127 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 PLSCR3Q9NRY6 295 aa5.13□□□□□ -1.59
CD44-221ENST00000526000 A0A1W2PPK0 400 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 IFITM5A6NNB3 132 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 NPIPB11E5RHQ5 1161 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 SDCBPO00560 298 aaPredicted RBP5.12□□□□□ -1.59
CD44-221ENST00000526000 SAP30O75446 220 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 MOSP00540 346 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 CSTBP04080 98 aaKnown RBP5.12□□□□□ -1.59
CD44-221ENST00000526000 GLAP06280 429 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 ELANEP08246 267 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 FRMD6-AS1P0C7T7 363 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 GTF2F2P13984 249 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 ARSBP15848 533 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 SPNP16150 400 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 CNTFRP26992 372 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 CHATP28329 748 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 SDC2P34741 201 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 KCNJ3P48549 501 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 SLURP1P55000 103 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 GNB1P62873 340 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 FOXE3Q13461 319 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 EBI3Q14213 229 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 INSL4Q14641 139 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 ARL6IP1Q15041 203 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 RSU1Q15404 277 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 CTF1Q16619 201 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 FAM27D1Q5T7N8 215 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 ASPHD1Q5U4P2 390 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 AWAT2Q6E213 333 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 SFXN4Q6P4A7 337 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 TMEM65Q6PI78 240 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 SLC16A12Q6ZSM3 486 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 TGIF2LXQ8IUE1 241 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 CLVS1Q8IUQ0 354 aaPredicted RBP5.12□□□□□ -1.59
CD44-221ENST00000526000 PRR18Q8N4B5 295 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 CHST4Q8NCG5 386 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 ACOT12Q8WYK0 555 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 AP3S1Q92572 193 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 DLX4Q92988 240 aaPredicted RBP5.12□□□□□ -1.59
CD44-221ENST00000526000 SLC25A46Q96AG3 418 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 CYYR1Q96J86 154 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms