RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 BORCS8Q96FH0 119 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 GAFA1Q96PS6 74 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 SMR3AQ99954 134 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 FOXC2Q99958 501 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 MICU1Q9BPX6 476 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 NRIP2Q9BQI9 281 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 CHCHD6Q9BRQ6 235 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 TMEM246Q9BRR3 403 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 NICN1Q9BSH3 213 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 RTL8AQ9BWD3 113 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 KRTAP4-3Q9BYR4 195 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 PKIBQ9C010 78 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 SLC22A4Q9H015 551 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 RAB1BQ9H0U4 201 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 ELL3Q9HB65 397 aaPredicted RBP2.37□□□□□ -2.03
CSDE1-208ENST00000524652 TMEM165Q9HC07 324 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 EXOSC4Q9NPD3 245 aaKnown RBP2.37□□□□□ -2.03
CSDE1-208ENST00000524652 GAGE2DQ9UEU5 116 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 ZNF222Q9UK12 451 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 STUB1Q9UNE7 303 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 MAB21L2Q9Y586 359 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 NPTNQ9Y639 398 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 DNAH3Q8TD57 4116 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 TET2Q6N021 2002 aaPredicted RBP2.36□□□□□ -2.03
CSDE1-208ENST00000524652 PPIAL4EA0A075B759 164 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 IGLV9-49A0A0B4J1Y8 123 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 TRAV1-2A0A0B4J238 106 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 hCG_1807616A0A1W2PRN6 198 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 MEX3AA1L020 520 aaKnown RBP2.36□□□□□ -2.03
CSDE1-208ENST00000524652 OOEPA6NGQ2 149 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 A6NLC8 198 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 RFPL4AA6NLU0 287 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 ANXA2P2A6NMY6 339 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 OR2AT4A6NND4 320 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 FOXI3A8MTJ6 420 aaPredicted RBP2.36□□□□□ -2.03
CSDE1-208ENST00000524652 TMEM14DPA8MWL7 114 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 CLDN25C9JDP6 229 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 PPIAL4DF5H284 164 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 RFPL4AL1F8VTS6 287 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 H3BMQ9 156 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 TRAPPC2LH3BP13 241 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 SLC17A2O00624 439 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 GEMIN2O14893 280 aaKnown RBP2.36□□□□□ -2.03
CSDE1-208ENST00000524652 TPD52L2O43399 206 aaKnown RBP2.36□□□□□ -2.03
CSDE1-208ENST00000524652 PPIHO43447 177 aaKnown RBP2.36□□□□□ -2.03
CSDE1-208ENST00000524652 AIREO43918 545 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 OR2H2O95918 312 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 PAHP00439 452 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 SERPINA3P01011 423 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 CD2P06729 351 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 HCKP08631 526 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 WNT2P09544 360 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 PPIAL4FP0DN26 164 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 IGHV4-31P0DP07 118 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 PSG2P11465 335 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 PRKACAP17612 351 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 RAB3BP20337 219 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 SERPINA2P20848 420 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 GALP22466 123 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 PRKACBP22694 351 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 GLRA1P23415 457 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 GATA2P23769 480 aaPredicted RBP2.36□□□□□ -2.03
CSDE1-208ENST00000524652 PSMA1P25786 263 aaKnown RBP2.36□□□□□ -2.03
CSDE1-208ENST00000524652 MAPK3P27361 379 aaPredicted RBP2.36□□□□□ -2.03
CSDE1-208ENST00000524652 HTR2CP28335 458 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 PTGFRP43088 359 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 GPR6P46095 362 aaPredicted RBP2.36□□□□□ -2.03
CSDE1-208ENST00000524652 RPL5P46777 297 aaKnown RBP2.36□□□□□ -2.03
CSDE1-208ENST00000524652 ATP1B3P54709 279 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 DLX1P56177 255 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 TMEM50BP56557 158 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 MRPS11P82912 194 aaKnown RBP2.36□□□□□ -2.03
CSDE1-208ENST00000524652 PAX2Q02962 417 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 ZNF146Q15072 292 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 P2RY14Q15391 338 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 TRAM1Q15629 374 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 MOGQ16653 247 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 DGUOKQ16854 277 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 HFEQ30201 348 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 C2orf76Q3KRA6 126 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 MOGAT2Q3SYC2 334 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 C1orf100Q5SVJ3 147 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 UTF1Q5T230 341 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 SFXN4Q6P4A7 337 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 GLIPR1L1Q6UWM5 242 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 C17orf107Q6ZR85 190 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 TCF23Q7RTU1 214 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 GPR141Q7Z602 305 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 LRRC28Q86X40 367 aaPredicted RBP2.36□□□□□ -2.03
CSDE1-208ENST00000524652 ZNF573Q86YE8 665 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 FTMTQ8N4E7 242 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 JAGN1Q8N5M9 183 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 TPRX1Q8N7U7 411 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 ZNF383Q8NA42 475 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 SPERTQ8NA61 448 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 ZNRF1Q8ND25 227 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 DEFB108BQ8NET1 73 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 Q8NFD4 153 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 PXT1Q8NFP0 134 aa2.36□□□□□ -2.03
CSDE1-208ENST00000524652 OR51D1Q8NGF3 324 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms