RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 CAPGP40121 348 aa11.97□□□□□ -0.49
MRPS28-209ENST00000522987 GABPB1Q06547 395 aaPredicted RBP11.97□□□□□ -0.49
MRPS28-209ENST00000522987 INSL4Q14641 139 aa11.97□□□□□ -0.49
MRPS28-209ENST00000522987 YIF1BQ5BJH7 314 aa11.97□□□□□ -0.49
MRPS28-209ENST00000522987 GLDNQ6ZMI3 551 aaPredicted RBP11.97□□□□□ -0.49
MRPS28-209ENST00000522987 SBSPONQ8IVN8 264 aa11.97□□□□□ -0.49
MRPS28-209ENST00000522987 MYOZ3Q8TDC0 251 aa11.97□□□□□ -0.49
MRPS28-209ENST00000522987 IL1F10Q8WWZ1 152 aa11.97□□□□□ -0.49
MRPS28-209ENST00000522987 GGHQ92820 318 aa11.97□□□□□ -0.49
MRPS28-209ENST00000522987 MRPS24Q96EL2 167 aaKnown RBP11.97□□□□□ -0.49
MRPS28-209ENST00000522987 UBE2E2Q96LR5 201 aa11.97□□□□□ -0.49
MRPS28-209ENST00000522987 RDH12Q96NR8 316 aa11.97□□□□□ -0.49
MRPS28-209ENST00000522987 DERL3Q96Q80 235 aa11.97□□□□□ -0.49
MRPS28-209ENST00000522987 FBXL15Q9H469 300 aa11.97□□□□□ -0.49
MRPS28-209ENST00000522987 SMAD5-AS1Q9Y6J3 95 aa11.97□□□□□ -0.49
MRPS28-209ENST00000522987 STAB2Q8WWQ8 2551 aa11.97□□□□□ -0.49
MRPS28-209ENST00000522987 SAA2-SAA4A0A096LPE2 208 aa11.96□□□□□ -0.49
MRPS28-209ENST00000522987 IRGMA1A4Y4 181 aa11.96□□□□□ -0.49
MRPS28-209ENST00000522987 OVOL1O14753 267 aa11.96□□□□□ -0.49
MRPS28-209ENST00000522987 ST8SIA5O15466 376 aa11.96□□□□□ -0.49
MRPS28-209ENST00000522987 SAA2P0DJI9 122 aaPredicted RBP11.96□□□□□ -0.49
MRPS28-209ENST00000522987 OR5H8P0DN80 308 aa11.96□□□□□ -0.49
MRPS28-209ENST00000522987 RAB9AP51151 201 aa11.96□□□□□ -0.49
MRPS28-209ENST00000522987 ST3GAL4Q11206 333 aa11.96□□□□□ -0.49
MRPS28-209ENST00000522987 C5orf64Q2M2E5 130 aa11.96□□□□□ -0.49
MRPS28-209ENST00000522987 TRAT1Q6PIZ9 186 aa11.96□□□□□ -0.49
MRPS28-209ENST00000522987 FAM131AQ6UXB0 335 aa11.96□□□□□ -0.49
MRPS28-209ENST00000522987 HAPLN4Q86UW8 402 aa11.96□□□□□ -0.49
MRPS28-209ENST00000522987 GAPTQ8N292 157 aa11.96□□□□□ -0.49
MRPS28-209ENST00000522987 ZNF485Q8NCK3 441 aa11.96□□□□□ -0.49
MRPS28-209ENST00000522987 SETD6Q8TBK2 473 aa11.96□□□□□ -0.49
MRPS28-209ENST00000522987 DLX4Q92988 240 aaPredicted RBP11.96□□□□□ -0.49
MRPS28-209ENST00000522987 CLCC1Q96S66 551 aa11.96□□□□□ -0.49
MRPS28-209ENST00000522987 SULT4A1Q9BR01 284 aa11.96□□□□□ -0.49
MRPS28-209ENST00000522987 PARP12Q9H0J9 701 aaKnown RBP11.96□□□□□ -0.49
MRPS28-209ENST00000522987 IGHV4OR15-8A0A075B7B6 117 aa11.95□□□□□ -0.5
MRPS28-209ENST00000522987 A0A087WW49 117 aa11.95□□□□□ -0.5
MRPS28-209ENST00000522987 SOX15O60248 233 aa11.95□□□□□ -0.5
MRPS28-209ENST00000522987 PDCD6O75340 191 aa11.95□□□□□ -0.5
MRPS28-209ENST00000522987 SC5DO75845 299 aa11.95□□□□□ -0.5
MRPS28-209ENST00000522987 IGLV1-40P01703 118 aa11.95□□□□□ -0.5
MRPS28-209ENST00000522987 IGHV3-11P01762 117 aa11.95□□□□□ -0.5
MRPS28-209ENST00000522987 HLA-DRB1P01911 266 aa11.95□□□□□ -0.5
MRPS28-209ENST00000522987 SPNP16150 400 aa11.95□□□□□ -0.5
MRPS28-209ENST00000522987 CELP19835 753 aa11.95□□□□□ -0.5
MRPS28-209ENST00000522987 PLGLAQ15195 96 aa11.95□□□□□ -0.5
MRPS28-209ENST00000522987 TMEM30BQ3MIR4 351 aa11.95□□□□□ -0.5
MRPS28-209ENST00000522987 RPL39P5Q59GN2 51 aa11.95□□□□□ -0.5
MRPS28-209ENST00000522987 FAM27D1Q5T7N8 215 aa11.95□□□□□ -0.5
MRPS28-209ENST00000522987 LIN54Q6MZP7 749 aa11.95□□□□□ -0.5
MRPS28-209ENST00000522987 C6orf201Q7Z4U5 140 aa11.95□□□□□ -0.5
MRPS28-209ENST00000522987 RCHY1Q96PM5 261 aa11.95□□□□□ -0.5
MRPS28-209ENST00000522987 FAM103A1Q9BTL3 118 aaKnown RBP11.95□□□□□ -0.5
MRPS28-209ENST00000522987 FAAP24Q9BTP7 215 aa11.95□□□□□ -0.5
MRPS28-209ENST00000522987 MBNL3Q9NUK0 354 aaKnown RBP11.95□□□□□ -0.5
MRPS28-209ENST00000522987 KIAA1456Q9P272 454 aa11.95□□□□□ -0.5
MRPS28-209ENST00000522987 JPT1Q9UK76 154 aa11.95□□□□□ -0.5
MRPS28-209ENST00000522987 MED21Q13503 144 aa11.94□□□□□ -0.5
MRPS28-209ENST00000522987 SRSF7Q16629 238 aaKnown RBP eCLIP11.94□□□□□ -0.5
MRPS28-209ENST00000522987 ZNF833PQ6ZTB9 187 aa11.94□□□□□ -0.5
MRPS28-209ENST00000522987 AHSA2Q719I0 299 aa11.94□□□□□ -0.5
MRPS28-209ENST00000522987 LYPD6Q86Y78 171 aa11.94□□□□□ -0.5
MRPS28-209ENST00000522987 C10orf67Q8IYJ2 551 aa11.94□□□□□ -0.5
MRPS28-209ENST00000522987 OR2AK2Q8NG84 335 aa11.94□□□□□ -0.5
MRPS28-209ENST00000522987 ARPC1AQ92747 370 aa11.94□□□□□ -0.5
MRPS28-209ENST00000522987 MS4A10Q96PG2 267 aa11.94□□□□□ -0.5
MRPS28-209ENST00000522987 NICN1Q9BSH3 213 aa11.94□□□□□ -0.5
MRPS28-209ENST00000522987 CHMP1AQ9HD42 196 aaPredicted RBP11.94□□□□□ -0.5
MRPS28-209ENST00000522987 GAB2Q9UQC2 676 aa11.94□□□□□ -0.5
MRPS28-209ENST00000522987 HUWE1Q7Z6Z7 4374 aaKnown RBP11.93□□□□□ -0.5
MRPS28-209ENST00000522987 FAM90A10PA6NDY2 464 aa11.93□□□□□ -0.5
MRPS28-209ENST00000522987 FAM90A7PA6NKC0 464 aa11.93□□□□□ -0.5
MRPS28-209ENST00000522987 TRIM64CA6NLI5 447 aa11.93□□□□□ -0.5
MRPS28-209ENST00000522987 FAM90A23PA8MXZ1 464 aa11.93□□□□□ -0.5
MRPS28-209ENST00000522987 FCN1O00602 326 aa11.93□□□□□ -0.5
MRPS28-209ENST00000522987 MYL12BO14950 172 aa11.93□□□□□ -0.5
MRPS28-209ENST00000522987 YPEL1O60688 119 aa11.93□□□□□ -0.5
MRPS28-209ENST00000522987 CHATP28329 748 aa11.93□□□□□ -0.5
MRPS28-209ENST00000522987 STEAP3Q658P3 488 aa11.93□□□□□ -0.5
MRPS28-209ENST00000522987 GALMQ96C23 342 aa11.93□□□□□ -0.5
MRPS28-209ENST00000522987 ABHD14BQ96IU4 210 aa11.93□□□□□ -0.5
MRPS28-209ENST00000522987 NEDD4LQ96PU5 975 aa11.93□□□□□ -0.5
MRPS28-209ENST00000522987 YPEL2Q96QA6 119 aa11.93□□□□□ -0.5
MRPS28-209ENST00000522987 IFI27L2Q9H2X8 130 aa11.93□□□□□ -0.5
MRPS28-209ENST00000522987 ZNF580Q9UK33 172 aa11.93□□□□□ -0.5
MRPS28-209ENST00000522987 C3orf84H3BNL1 204 aa11.92□□□□□ -0.5
MRPS28-209ENST00000522987 H7C2Y5 167 aa11.92□□□□□ -0.5
MRPS28-209ENST00000522987 CA11O75493 328 aa11.92□□□□□ -0.5
MRPS28-209ENST00000522987 GNAO1P09471 354 aa11.92□□□□□ -0.5
MRPS28-209ENST00000522987 FRMD6-AS1P0C7T7 363 aa11.92□□□□□ -0.5
MRPS28-209ENST00000522987 CX3CL1P78423 397 aa11.92□□□□□ -0.5
MRPS28-209ENST00000522987 HTD2P86397 168 aa11.92□□□□□ -0.5
MRPS28-209ENST00000522987 RUNX1Q01196 453 aa11.92□□□□□ -0.5
MRPS28-209ENST00000522987 HMGN3Q15651 99 aa11.92□□□□□ -0.5
MRPS28-209ENST00000522987 C6orf141Q5SZD1 244 aa11.92□□□□□ -0.5
MRPS28-209ENST00000522987 LAIR2Q6ISS4 152 aa11.92□□□□□ -0.5
MRPS28-209ENST00000522987 MINDY2Q8NBR6 621 aa11.92□□□□□ -0.5
MRPS28-209ENST00000522987 MUC7Q8TAX7 377 aa11.92□□□□□ -0.5
MRPS28-209ENST00000522987 HDHD3Q9BSH5 251 aaPredicted RBP11.92□□□□□ -0.5
MRPS28-209ENST00000522987 TENM2Q9NT68 2774 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms