RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 MS4A18H0YCH9 400 aa8.71□□□□□ -1.01
PDGFRB-207ENST00000520579 LYL1P12980 280 aa8.71□□□□□ -1.01
PDGFRB-207ENST00000520579 ARF6P62330 175 aa8.71□□□□□ -1.01
PDGFRB-207ENST00000520579 MS4A18Q3C1V0 323 aa8.71□□□□□ -1.01
PDGFRB-207ENST00000520579 BSXQ3C1V8 233 aa8.71□□□□□ -1.01
PDGFRB-207ENST00000520579 MRPL43Q8N983 215 aaKnown RBP8.71□□□□□ -1.01
PDGFRB-207ENST00000520579 OR2Y1Q8NGV0 311 aa8.71□□□□□ -1.01
PDGFRB-207ENST00000520579 OR2V1Q8NHB1 315 aa8.71□□□□□ -1.01
PDGFRB-207ENST00000520579 PIGCQ92535 297 aa8.71□□□□□ -1.01
PDGFRB-207ENST00000520579 YPEL4Q96NS1 127 aa8.71□□□□□ -1.01
PDGFRB-207ENST00000520579 PDE6DO43924 150 aa8.71□□□□□ -1.02
PDGFRB-207ENST00000520579 SCGB2A1O75556 95 aa8.71□□□□□ -1.02
PDGFRB-207ENST00000520579 HAND1O96004 215 aa8.71□□□□□ -1.02
PDGFRB-207ENST00000520579 OTX2P32243 289 aa8.71□□□□□ -1.02
PDGFRB-207ENST00000520579 RUNX3Q13761 415 aa8.71□□□□□ -1.02
PDGFRB-207ENST00000520579 H1FNTQ75WM6 255 aaPredicted RBP8.71□□□□□ -1.02
PDGFRB-207ENST00000520579 CADM4Q8NFZ8 388 aa8.71□□□□□ -1.02
PDGFRB-207ENST00000520579 PTPMT1Q8WUK0 201 aaPredicted RBP8.71□□□□□ -1.02
PDGFRB-207ENST00000520579 ST3GAL6Q9Y274 331 aa8.71□□□□□ -1.02
PDGFRB-207ENST00000520579 TRAPPC1Q9Y5R8 145 aa8.71□□□□□ -1.02
PDGFRB-207ENST00000520579 IGHV3-9P01782 118 aa8.71□□□□□ -1.02
PDGFRB-207ENST00000520579 GFRA1P56159 465 aa8.71□□□□□ -1.02
PDGFRB-207ENST00000520579 TBC1D26Q86UD7 250 aa8.71□□□□□ -1.02
PDGFRB-207ENST00000520579 C1orf147Q96MC9 270 aaPredicted RBP8.71□□□□□ -1.02
PDGFRB-207ENST00000520579 AP1S3Q96PC3 154 aa8.71□□□□□ -1.02
PDGFRB-207ENST00000520579 HSPB9Q9BQS6 159 aa8.71□□□□□ -1.02
PDGFRB-207ENST00000520579 PLEKHF2Q9H8W4 249 aa8.71□□□□□ -1.02
PDGFRB-207ENST00000520579 SLC45A2Q9UMX9 530 aa8.71□□□□□ -1.02
PDGFRB-207ENST00000520579 DOCK10Q96BY6 2186 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 C3orf85A0A1B0GTC6 90 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 MAP1LC3B2A6NCE7 125 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 OR10J4P0C629 311 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 KIAA1644Q3SXP7 199 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 BAGE3Q86Y29 109 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 BAGE2Q86Y30 109 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 TMEM45BQ96B21 275 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 MAP1LC3BQ9GZQ8 125 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 OR51I2Q9H344 312 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 COPS7AQ9UBW8 275 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 KCNS2Q9ULS6 477 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 ZNF737O75373 536 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 CDS2O95674 445 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 BCL2P10415 239 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 ZNF43P17038 809 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 PMCHP20382 165 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 PAX2Q02962 417 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 SPATA45Q537H7 98 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 FAM90A2PQ658T7 463 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 BMFQ96LC9 184 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 CCL28Q9NRJ3 127 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 SIRPB1O00241 398 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 TNFRSF10CO14798 259 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 NTF3P20783 257 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 COL9A1P20849 921 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 DAP3P51398 398 aaKnown RBP8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 IGFBP7Q16270 282 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 SRSF7Q16629 238 aaKnown RBP eCLIP8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 TMEM241Q24JQ0 296 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 CEACAM21Q3KPI0 293 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 GAPTQ8N292 157 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 D2HGDHQ8N465 521 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 OR2Z1Q8NG97 314 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 OR51G1Q8NGK1 321 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 Q9N2K0 584 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 SLC7A10Q9NS82 523 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 TUBD1Q9UJT1 453 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 FER1L5A0AVI2 2057 aa8.7□□□□□ -1.02
PDGFRB-207ENST00000520579 LOC102723971A0A1B0GUV8 181 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 C1QTNF9BB2RNN3 333 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 CDKN1AP38936 164 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 ID1P41134 155 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 ZNF83P51522 516 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 PLP1P60201 277 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 BAXQ07812 192 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 MRPL52Q86TS9 123 aaKnown RBP8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 ZDHHC23Q8IYP9 409 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 OR2T10Q8NGZ9 312 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 LYPD6BQ8NI32 183 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 PTX4Q96A99 478 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 STARD4Q96DR4 205 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 BORCS8Q96FH0 119 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 ZC2HC1AQ96GY0 325 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 PLA2G2FQ9BZM2 168 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 TRAF3IP2O43734 574 aaPredicted RBP8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 HSPB1P04792 205 aaKnown RBP8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 COL8A2P25067 703 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 LGALS7P47929 136 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 SLC6A8P48029 635 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 FSCN3Q9NQT6 498 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 THYN1Q9P016 225 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 KIAA1324LA8MWY0 1029 aaPredicted RBP8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 RBFOX2O43251 390 aaKnown RBP eCLIP8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 BLKP51451 505 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 IL13RA2Q14627 380 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 ZNF506Q5JVG8 444 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 H1FOOQ8IZA3 346 aaPredicted RBP8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 DERL1Q9BUN8 251 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 C12orf49Q9H741 205 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 ZDHHC11Q9H8X9 412 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 UQCR10Q9UDW1 63 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms