RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 EFNB3Q15768 340 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 IAH1Q2TAA2 248 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-222ENST00000493919 RPTNQ6XPR3 784 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 GTF2H5Q6ZYL4 71 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 ZNF440Q8IYI8 595 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 ARIH2OSQ8N7S6 290 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 ZNF418Q8TF45 676 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-222ENST00000493919 THEM6Q8WUY1 208 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 ST8SIA1Q92185 356 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 ZNF582Q96NG8 517 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-222ENST00000493919 MICU1Q9BPX6 476 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 SPATA25Q9BR10 227 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 CTDSP1Q9GZU7 261 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 SHPKQ9UHJ6 478 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 SMIM9A6NGZ8 99 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 ZNF705FA8MVS1 300 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-222ENST00000493919 E9PLN8 166 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 ZG16O60844 167 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 VENTXO95231 258 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 CD8AP01732 235 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 ZNF705DP0CH99 300 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-222ENST00000493919 ZNF705BP0CI00 300 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-222ENST00000493919 GP1BBP13224 206 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 HNRNPA3P51991 378 aaKnown RBP9.92□□□□□ -0.82
BRCA1-222ENST00000493919 HSD52Q0P140 79 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 ACSF3Q4G176 576 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-222ENST00000493919 PLXDC2Q6UX71 529 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 FA2HQ7L5A8 372 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 ZNF550Q7Z398 422 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 ABHD4Q8TB40 342 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 Q8WTZ3 238 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 PTX4Q96A99 478 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 PERPQ96FX8 193 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 ZNF75AQ96N20 296 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 TSPAN32Q96QS1 320 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 IMMP2LQ96T52 175 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 VKORC1Q9BQB6 163 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 LPAR5Q9H1C0 372 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 HSF4Q9ULV5 492 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 RNF115Q9Y4L5 304 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 FAM215AQ9Y5M1 114 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 MYO7BQ6PIF6 2116 aa9.91□□□□□ -0.82
BRCA1-222ENST00000493919 TRAV38-1A0A0B4J264 116 aa9.91□□□□□ -0.82
BRCA1-222ENST00000493919 CTDSPLO15194 276 aa9.91□□□□□ -0.82
BRCA1-222ENST00000493919 GCM2O75603 506 aaPredicted RBP9.91□□□□□ -0.82
BRCA1-222ENST00000493919 SERPINE2P07093 398 aa9.91□□□□□ -0.82
BRCA1-222ENST00000493919 FAM157CP0CG43 387 aa9.91□□□□□ -0.82
BRCA1-222ENST00000493919 NPBWR2P48146 333 aa9.91□□□□□ -0.82
BRCA1-222ENST00000493919 DAPP51397 102 aa9.91□□□□□ -0.82
BRCA1-222ENST00000493919 SEC61GP60059 68 aa9.91□□□□□ -0.82
BRCA1-222ENST00000493919 EIF2B1Q14232 305 aaKnown RBP9.91□□□□□ -0.82
BRCA1-222ENST00000493919 SPHARQ15513 63 aa9.91□□□□□ -0.82
BRCA1-222ENST00000493919 MBNL2Q5VZF2 373 aaKnown RBP9.91□□□□□ -0.82
BRCA1-222ENST00000493919 OR10Q1Q8NGQ4 319 aa9.91□□□□□ -0.82
BRCA1-222ENST00000493919 DNAJA3Q96EY1 480 aa9.91□□□□□ -0.82
BRCA1-222ENST00000493919 FAM46AQ96IP4 442 aaKnown RBP9.91□□□□□ -0.82
BRCA1-222ENST00000493919 SNX22Q96L94 193 aa9.91□□□□□ -0.82
BRCA1-222ENST00000493919 CDH20Q9HBT6 801 aa9.91□□□□□ -0.82
BRCA1-222ENST00000493919 PARP11Q9NR21 331 aa9.91□□□□□ -0.82
BRCA1-222ENST00000493919 TNFSF11O14788 317 aa9.9□□□□□ -0.82
BRCA1-222ENST00000493919 EPPINO95925 133 aa9.9□□□□□ -0.82
BRCA1-222ENST00000493919 TYMSP04818 313 aa9.9□□□□□ -0.82
BRCA1-222ENST00000493919 CRYGBP07316 175 aa9.9□□□□□ -0.82
BRCA1-222ENST00000493919 KLF9Q13886 244 aaPredicted RBP9.9□□□□□ -0.82
BRCA1-222ENST00000493919 TDRG1Q3Y452 100 aa9.9□□□□□ -0.82
BRCA1-222ENST00000493919 ASPHD2Q6ICH7 369 aa9.9□□□□□ -0.82
BRCA1-222ENST00000493919 RNASEKQ6P5S7 137 aaKnown RBP9.9□□□□□ -0.82
BRCA1-222ENST00000493919 TOMM20LQ6UXN7 152 aa9.9□□□□□ -0.82
BRCA1-222ENST00000493919 ESPNLQ6ZVH7 1005 aa9.9□□□□□ -0.82
BRCA1-222ENST00000493919 GGNQ86UU5 652 aa9.9□□□□□ -0.82
BRCA1-222ENST00000493919 VN1R17PQ8TDU5 208 aa9.9□□□□□ -0.82
BRCA1-222ENST00000493919 RBM24Q9BX46 236 aaKnown RBP9.9□□□□□ -0.82
BRCA1-222ENST00000493919 MAP1LC3CQ9BXW4 147 aa9.9□□□□□ -0.82
BRCA1-222ENST00000493919 RSPO3Q9BXY4 272 aaPredicted RBP9.9□□□□□ -0.82
BRCA1-222ENST00000493919 ACER3Q9NUN7 267 aa9.9□□□□□ -0.82
BRCA1-222ENST00000493919 MRPS18AQ9NVS2 196 aaKnown RBP9.9□□□□□ -0.82
BRCA1-222ENST00000493919 SIGLEC7Q9Y286 467 aa9.9□□□□□ -0.82
BRCA1-222ENST00000493919 ADGRG4Q8IZF6 3080 aa9.9□□□□□ -0.82
BRCA1-222ENST00000493919 KIAA1549Q9HCM3 1950 aa9.9□□□□□ -0.82
BRCA1-222ENST00000493919 CLDN34H7C241 214 aa9.9□□□□□ -0.83
BRCA1-222ENST00000493919 J3QR89 54 aa9.9□□□□□ -0.83
BRCA1-222ENST00000493919 K7EPK0 472 aa9.9□□□□□ -0.83
BRCA1-222ENST00000493919 MPPED1O15442 326 aa9.9□□□□□ -0.83
BRCA1-222ENST00000493919 FOXH1O75593 365 aa9.9□□□□□ -0.83
BRCA1-222ENST00000493919 AMTP48728 403 aa9.9□□□□□ -0.83
BRCA1-222ENST00000493919 CRYBA2P53672 197 aa9.9□□□□□ -0.83
BRCA1-222ENST00000493919 CLDN15P56746 228 aa9.9□□□□□ -0.83
BRCA1-222ENST00000493919 ADORA2A-AS1P86434 159 aa9.9□□□□□ -0.83
BRCA1-222ENST00000493919 BTNL8Q6UX41 500 aa9.9□□□□□ -0.83
BRCA1-222ENST00000493919 MEPCEQ7L2J0 689 aaKnown RBP9.9□□□□□ -0.83
BRCA1-222ENST00000493919 FAM71E2Q8N5Q1 922 aa9.9□□□□□ -0.83
BRCA1-222ENST00000493919 GPR32P1Q8NGA4 272 aa9.9□□□□□ -0.83
BRCA1-222ENST00000493919 OR5D13Q8NGL4 314 aa9.9□□□□□ -0.83
BRCA1-222ENST00000493919 OR1B1Q8NGR6 318 aa9.9□□□□□ -0.83
BRCA1-222ENST00000493919 OR2T27Q8NH04 317 aa9.9□□□□□ -0.83
BRCA1-222ENST00000493919 OR10D3Q8NH80 312 aa9.9□□□□□ -0.83
BRCA1-222ENST00000493919 SSC4DQ8WTU2 575 aa9.9□□□□□ -0.83
BRCA1-222ENST00000493919 ZFP3Q96NJ6 502 aa9.9□□□□□ -0.83
BRCA1-222ENST00000493919 P2RX4Q99571 388 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms