RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 TIMD4Q96H15 378 aa7.78□□□□□ -1.16
CSTF1-206ENST00000493039 FOXC2Q99958 501 aa7.78□□□□□ -1.16
CSTF1-206ENST00000493039 SULT4A1Q9BR01 284 aa7.78□□□□□ -1.16
CSTF1-206ENST00000493039 URM1Q9BTM9 101 aaKnown RBP7.78□□□□□ -1.16
CSTF1-206ENST00000493039 FAAP24Q9BTP7 215 aa7.78□□□□□ -1.16
CSTF1-206ENST00000493039 TPPP3Q9BW30 176 aa7.78□□□□□ -1.16
CSTF1-206ENST00000493039 CHST6Q9GZX3 395 aa7.78□□□□□ -1.16
CSTF1-206ENST00000493039 CSTL1Q9H114 145 aa7.78□□□□□ -1.16
CSTF1-206ENST00000493039 K7N7A8 449 aa7.77□□□□□ -1.17
CSTF1-206ENST00000493039 HLA-DQB1P01920 261 aa7.77□□□□□ -1.17
CSTF1-206ENST00000493039 ZNF44P15621 663 aa7.77□□□□□ -1.17
CSTF1-206ENST00000493039 FUT3P21217 361 aa7.77□□□□□ -1.17
CSTF1-206ENST00000493039 PAX6P26367 422 aa7.77□□□□□ -1.17
CSTF1-206ENST00000493039 OR3A1P47881 315 aa7.77□□□□□ -1.17
CSTF1-206ENST00000493039 LINC00596Q86U02 117 aa7.77□□□□□ -1.17
CSTF1-206ENST00000493039 CLDND2Q8NHS1 167 aa7.77□□□□□ -1.17
CSTF1-206ENST00000493039 ZFAND1Q8TCF1 268 aa7.77□□□□□ -1.17
CSTF1-206ENST00000493039 RAB40AQ8WXH6 277 aa7.77□□□□□ -1.17
CSTF1-206ENST00000493039 DYRK2Q92630 601 aa7.77□□□□□ -1.17
CSTF1-206ENST00000493039 WDFY2Q96P53 400 aa7.77□□□□□ -1.17
CSTF1-206ENST00000493039 LPAR2Q9HBW0 351 aa7.77□□□□□ -1.17
CSTF1-206ENST00000493039 OPN4Q9UHM6 478 aa7.77□□□□□ -1.17
CSTF1-206ENST00000493039 PEX16Q9Y5Y5 336 aa7.77□□□□□ -1.17
CSTF1-206ENST00000493039 MFNGO00587 321 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 HSPB6O14558 160 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 XRCC3O43542 346 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 PDCD6O75340 191 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 SAP30O75446 220 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 TK1P04183 234 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 CHRM2P08172 466 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 CSF3P09919 207 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 NBEAP1P0C6P0 100 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 GNB3P16520 340 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 DSCR9P59020 149 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 ARF6P62330 175 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 USF2Q15853 346 aaPredicted RBP7.76□□□□□ -1.17
CSTF1-206ENST00000493039 C5orf64Q2M2E5 130 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 ZNF260Q3ZCT1 412 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 LPCAT3Q6P1A2 487 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 CNIH2Q6PI25 160 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 CCDC190Q86UF4 302 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 FOXRED2Q8IWF2 684 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 OR56B1Q8NGI3 324 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 PLPPR1Q8TBJ4 325 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 S100A16Q96FQ6 103 aaKnown RBP7.76□□□□□ -1.17
CSTF1-206ENST00000493039 COQ2Q96H96 371 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 PIMREGQ9BSJ6 248 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 DPCDQ9BVM2 203 aaPredicted RBP7.76□□□□□ -1.17
CSTF1-206ENST00000493039 GGACTQ9BVM4 153 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 PECRQ9BY49 303 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 ZNF665Q9H7R5 613 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 PATZ1Q9HBE1 687 aaKnown RBP7.76□□□□□ -1.17
CSTF1-206ENST00000493039 HSF4Q9ULV5 492 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 ABCA2Q9BZC7 2435 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 CSPG4Q6UVK1 2322 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 TRAV18A0A075B6X5 111 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 TEX13DA0A0J9YY54 714 aaPredicted RBP7.76□□□□□ -1.17
CSTF1-206ENST00000493039 SULT1C2O00338 296 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 DVL1O14640 695 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 SCGB1D1O95968 90 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 IGHV2-5P01817 119 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 IL13RA1P78552 427 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 CDNFQ49AH0 187 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 AKIRIN2Q53H80 203 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 NKAPLQ5M9Q1 402 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 FAHD2BQ6P2I3 314 aaPredicted RBP7.76□□□□□ -1.17
CSTF1-206ENST00000493039 Q6ZTK2 550 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 NOXA1Q86UR1 476 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 MUC20Q8N307 709 aaPredicted RBP7.76□□□□□ -1.17
CSTF1-206ENST00000493039 CHST4Q8NCG5 386 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 GCDHQ92947 438 aaPredicted RBP7.76□□□□□ -1.17
CSTF1-206ENST00000493039 RAB3CQ96E17 227 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 FAHD2AQ96GK7 314 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 Q96MF0 132 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 HINT2Q9BX68 163 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 PGPEP1Q9NXJ5 209 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 KCNIP3Q9Y2W7 256 aa7.76□□□□□ -1.17
CSTF1-206ENST00000493039 ARHGAP32A7KAX9 2087 aa7.75□□□□□ -1.17
CSTF1-206ENST00000493039 UBE2QL1A1L167 161 aa7.75□□□□□ -1.17
CSTF1-206ENST00000493039 SMLR1H3BR10 107 aa7.75□□□□□ -1.17
CSTF1-206ENST00000493039 HIST1H1DP16402 221 aaKnown RBP7.75□□□□□ -1.17
CSTF1-206ENST00000493039 ZNF25P17030 456 aaPredicted RBP7.75□□□□□ -1.17
CSTF1-206ENST00000493039 UCP1P25874 307 aa7.75□□□□□ -1.17
CSTF1-206ENST00000493039 ZFP36P26651 326 aaKnown RBP7.75□□□□□ -1.17
CSTF1-206ENST00000493039 GAPTQ8N292 157 aa7.75□□□□□ -1.17
CSTF1-206ENST00000493039 SPICQ8N5J4 248 aa7.75□□□□□ -1.17
CSTF1-206ENST00000493039 COMMD1Q8N668 190 aa7.75□□□□□ -1.17
CSTF1-206ENST00000493039 TPRX1Q8N7U7 411 aa7.75□□□□□ -1.17
CSTF1-206ENST00000493039 DIRAS2Q96HU8 199 aa7.75□□□□□ -1.17
CSTF1-206ENST00000493039 SNX22Q96L94 193 aa7.75□□□□□ -1.17
CSTF1-206ENST00000493039 HDHD3Q9BSH5 251 aaPredicted RBP7.75□□□□□ -1.17
CSTF1-206ENST00000493039 PLEKHJ1Q9NW61 149 aa7.75□□□□□ -1.17
CSTF1-206ENST00000493039 V9GYH0 126 aa7.75□□□□□ -1.17
CSTF1-206ENST00000493039 HIVEP1P15822 2718 aa7.75□□□□□ -1.17
CSTF1-206ENST00000493039 A0A1W2PQ09 198 aa7.75□□□□□ -1.17
CSTF1-206ENST00000493039 TMEM235A6NFC5 223 aa7.75□□□□□ -1.17
CSTF1-206ENST00000493039 SERPINE3A8MV23 424 aa7.75□□□□□ -1.17
CSTF1-206ENST00000493039 MPTX1A8MV57 137 aa7.75□□□□□ -1.17
CSTF1-206ENST00000493039 FAM157AC9JC47 383 aa7.75□□□□□ -1.17
CSTF1-206ENST00000493039 RNF223E7ERA6 249 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms