RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 CNOT2Q9NZN8 540 aaKnown RBP9.51□□□□□ -0.89
VPS16-208ENST00000487461 ZNF580Q9UK33 172 aa9.51□□□□□ -0.89
VPS16-208ENST00000487461 JPT1Q9UK76 154 aa9.51□□□□□ -0.89
VPS16-208ENST00000487461 TENM3Q9P273 2699 aa9.51□□□□□ -0.89
VPS16-208ENST00000487461 IGHV7-81A0A0B4J1V7 117 aa9.5□□□□□ -0.89
VPS16-208ENST00000487461 SEC14L6B5MCN3 397 aa9.5□□□□□ -0.89
VPS16-208ENST00000487461 YPEL1O60688 119 aa9.5□□□□□ -0.89
VPS16-208ENST00000487461 NHLRC4P0CG21 123 aaPredicted RBP9.5□□□□□ -0.89
VPS16-208ENST00000487461 ECI1P42126 302 aa9.5□□□□□ -0.89
VPS16-208ENST00000487461 OR3A3P47888 321 aa9.5□□□□□ -0.89
VPS16-208ENST00000487461 WNT4P56705 351 aa9.5□□□□□ -0.89
VPS16-208ENST00000487461 ACTBP60709 375 aa9.5□□□□□ -0.89
VPS16-208ENST00000487461 FHL3Q13643 280 aa9.5□□□□□ -0.89
VPS16-208ENST00000487461 NKAPLQ5M9Q1 402 aa9.5□□□□□ -0.89
VPS16-208ENST00000487461 C6orf141Q5SZD1 244 aa9.5□□□□□ -0.89
VPS16-208ENST00000487461 OR10K2Q6IF99 312 aa9.5□□□□□ -0.89
VPS16-208ENST00000487461 ZNF833PQ6ZTB9 187 aa9.5□□□□□ -0.89
VPS16-208ENST00000487461 AHSA2Q719I0 299 aa9.5□□□□□ -0.89
VPS16-208ENST00000487461 ZNF554Q86TJ5 538 aa9.5□□□□□ -0.89
VPS16-208ENST00000487461 ZNF491Q8N8L2 437 aa9.5□□□□□ -0.89
VPS16-208ENST00000487461 BPIFB6Q8NFQ5 453 aa9.5□□□□□ -0.89
VPS16-208ENST00000487461 FBLIM1Q8WUP2 373 aa9.5□□□□□ -0.89
VPS16-208ENST00000487461 YPEL2Q96QA6 119 aa9.5□□□□□ -0.89
VPS16-208ENST00000487461 SULT4A1Q9BR01 284 aa9.5□□□□□ -0.89
VPS16-208ENST00000487461 CHCHD6Q9BRQ6 235 aa9.5□□□□□ -0.89
VPS16-208ENST00000487461 ANKRD60Q9BZ19 345 aa9.5□□□□□ -0.89
VPS16-208ENST00000487461 OR51J1Q9H342 316 aa9.5□□□□□ -0.89
VPS16-208ENST00000487461 GNB4Q9HAV0 340 aa9.5□□□□□ -0.89
VPS16-208ENST00000487461 C8orf4Q9NR00 106 aa9.5□□□□□ -0.89
VPS16-208ENST00000487461 GHRLQ9UBU3 117 aa9.5□□□□□ -0.89
VPS16-208ENST00000487461 I3L521 148 aa9.49□□□□□ -0.89
VPS16-208ENST00000487461 MYL12BO14950 172 aa9.49□□□□□ -0.89
VPS16-208ENST00000487461 ATP6V0E1O15342 81 aa9.49□□□□□ -0.89
VPS16-208ENST00000487461 IGLV1-40P01703 118 aa9.49□□□□□ -0.89
VPS16-208ENST00000487461 OR5H8P0DN80 308 aa9.49□□□□□ -0.89
VPS16-208ENST00000487461 CHATP28329 748 aa9.49□□□□□ -0.89
VPS16-208ENST00000487461 ZNF260Q3ZCT1 412 aa9.49□□□□□ -0.89
VPS16-208ENST00000487461 ACSM3Q53FZ2 586 aa9.49□□□□□ -0.89
VPS16-208ENST00000487461 LY6G6FQ5SQ64 297 aa9.49□□□□□ -0.89
VPS16-208ENST00000487461 FAM27D1Q5T7N8 215 aa9.49□□□□□ -0.89
VPS16-208ENST00000487461 ASPHD1Q5U4P2 390 aa9.49□□□□□ -0.89
VPS16-208ENST00000487461 LIN54Q6MZP7 749 aa9.49□□□□□ -0.89
VPS16-208ENST00000487461 TMEM65Q6PI78 240 aa9.49□□□□□ -0.89
VPS16-208ENST00000487461 C6orf201Q7Z4U5 140 aa9.49□□□□□ -0.89
VPS16-208ENST00000487461 LRRTM1Q86UE6 522 aa9.49□□□□□ -0.89
VPS16-208ENST00000487461 C8orf59Q8N0T1 100 aaPredicted RBP9.49□□□□□ -0.89
VPS16-208ENST00000487461 NKAIN3Q8N8D7 197 aa9.49□□□□□ -0.89
VPS16-208ENST00000487461 NPBQ8NG41 125 aa9.49□□□□□ -0.89
VPS16-208ENST00000487461 OR1N2Q8NGR9 330 aa9.49□□□□□ -0.89
VPS16-208ENST00000487461 GALMQ96C23 342 aa9.49□□□□□ -0.89
VPS16-208ENST00000487461 UBE2E2Q96LR5 201 aa9.49□□□□□ -0.89
VPS16-208ENST00000487461 NEDD4LQ96PU5 975 aa9.49□□□□□ -0.89
VPS16-208ENST00000487461 OR5B12Q96R08 314 aa9.49□□□□□ -0.89
VPS16-208ENST00000487461 ZNF251Q9BRH9 671 aa9.49□□□□□ -0.89
VPS16-208ENST00000487461 FKBP14Q9NWM8 211 aa9.49□□□□□ -0.89
VPS16-208ENST00000487461 SAA2-SAA4A0A096LPE2 208 aa9.48□□□□□ -0.89
VPS16-208ENST00000487461 TRAV41A0A0B4J266 112 aa9.48□□□□□ -0.89
VPS16-208ENST00000487461 NBR2O15453 112 aa9.48□□□□□ -0.89
VPS16-208ENST00000487461 RGS11O94810 467 aa9.48□□□□□ -0.89
VPS16-208ENST00000487461 HLA-DRB1P01911 266 aa9.48□□□□□ -0.89
VPS16-208ENST00000487461 SAA2P0DJI9 122 aaPredicted RBP9.48□□□□□ -0.89
VPS16-208ENST00000487461 MAPK3P27361 379 aaPredicted RBP9.48□□□□□ -0.89
VPS16-208ENST00000487461 HTR2CP28335 458 aa9.48□□□□□ -0.89
VPS16-208ENST00000487461 BLVRBP30043 206 aaPredicted RBP9.48□□□□□ -0.89
VPS16-208ENST00000487461 RAB9AP51151 201 aa9.48□□□□□ -0.89
VPS16-208ENST00000487461 GNB1P62873 340 aa9.48□□□□□ -0.89
VPS16-208ENST00000487461 RPS27AP62979 156 aaKnown RBP9.48□□□□□ -0.89
VPS16-208ENST00000487461 RUNX1Q01196 453 aa9.48□□□□□ -0.89
VPS16-208ENST00000487461 RCN1Q15293 331 aa9.48□□□□□ -0.89
VPS16-208ENST00000487461 HMGN3Q15651 99 aa9.48□□□□□ -0.89
VPS16-208ENST00000487461 C5orf64Q2M2E5 130 aa9.48□□□□□ -0.89
VPS16-208ENST00000487461 C1orf100Q5SVJ3 147 aa9.48□□□□□ -0.89
VPS16-208ENST00000487461 MINDY2Q8NBR6 621 aa9.48□□□□□ -0.89
VPS16-208ENST00000487461 ASCL2Q99929 193 aa9.48□□□□□ -0.89
VPS16-208ENST00000487461 CST11Q9H112 138 aa9.48□□□□□ -0.89
VPS16-208ENST00000487461 IFI27L2Q9H2X8 130 aa9.48□□□□□ -0.89
VPS16-208ENST00000487461 KCNK15Q9H427 330 aa9.48□□□□□ -0.89
VPS16-208ENST00000487461 PARP11Q9NR21 331 aa9.48□□□□□ -0.89
VPS16-208ENST00000487461 VSIG4Q9Y279 399 aa9.48□□□□□ -0.89
VPS16-208ENST00000487461 U3KQK5 164 aa9.48□□□□□ -0.89
VPS16-208ENST00000487461 NDUFA3O95167 84 aa9.47□□□□□ -0.89
VPS16-208ENST00000487461 UBBP0CG47 229 aa9.47□□□□□ -0.89
VPS16-208ENST00000487461 CT45A6P0DMU7 189 aa9.47□□□□□ -0.89
VPS16-208ENST00000487461 CT45A5P0DMU8 189 aa9.47□□□□□ -0.89
VPS16-208ENST00000487461 CT45A7P0DMV0 189 aa9.47□□□□□ -0.89
VPS16-208ENST00000487461 CD37P11049 281 aa9.47□□□□□ -0.89
VPS16-208ENST00000487461 QRFPP83859 136 aa9.47□□□□□ -0.89
VPS16-208ENST00000487461 UNC119Q13432 240 aa9.47□□□□□ -0.89
VPS16-208ENST00000487461 ZNF880Q6PDB4 577 aa9.47□□□□□ -0.89
VPS16-208ENST00000487461 MS4A15Q8N5U1 240 aa9.47□□□□□ -0.89
VPS16-208ENST00000487461 OR2AK2Q8NG84 335 aa9.47□□□□□ -0.89
VPS16-208ENST00000487461 IL1F10Q8WWZ1 152 aa9.47□□□□□ -0.89
VPS16-208ENST00000487461 THRSPQ92748 146 aa9.47□□□□□ -0.89
VPS16-208ENST00000487461 NICN1Q9BSH3 213 aa9.47□□□□□ -0.89
VPS16-208ENST00000487461 TMED9Q9BVK6 235 aa9.47□□□□□ -0.89
VPS16-208ENST00000487461 TM2D1Q9BX74 207 aa9.47□□□□□ -0.89
VPS16-208ENST00000487461 ABRACLQ9P1F3 81 aa9.47□□□□□ -0.89
VPS16-208ENST00000487461 ERGIC3Q9Y282 383 aa9.47□□□□□ -0.89
VPS16-208ENST00000487461 FBXO7Q9Y3I1 522 aa9.47□□□□□ -0.89
VPS16-208ENST00000487461 A0A0A6YYD4 124 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms