RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 CHRNA7P36544 502 aa10.29□□□□□ -0.76
VCL-205ENST00000478896 RAB9AP51151 201 aa10.29□□□□□ -0.76
VCL-205ENST00000478896 TAS2R43P59537 309 aa10.29□□□□□ -0.76
VCL-205ENST00000478896 RUNX1Q01196 453 aa10.29□□□□□ -0.76
VCL-205ENST00000478896 PLGLAQ15195 96 aa10.29□□□□□ -0.76
VCL-205ENST00000478896 C5orf64Q2M2E5 130 aa10.29□□□□□ -0.76
VCL-205ENST00000478896 LIN54Q6MZP7 749 aa10.29□□□□□ -0.76
VCL-205ENST00000478896 ODF3L1Q8IXM7 274 aa10.29□□□□□ -0.76
VCL-205ENST00000478896 GAPTQ8N292 157 aa10.29□□□□□ -0.76
VCL-205ENST00000478896 NKAIN3Q8N8D7 197 aa10.29□□□□□ -0.76
VCL-205ENST00000478896 OR2AK2Q8NG84 335 aa10.29□□□□□ -0.76
VCL-205ENST00000478896 FAM46BQ96A09 425 aa10.29□□□□□ -0.76
VCL-205ENST00000478896 GALMQ96C23 342 aa10.29□□□□□ -0.76
VCL-205ENST00000478896 TMEM80Q96HE8 168 aa10.29□□□□□ -0.76
VCL-205ENST00000478896 Q96M66 194 aa10.29□□□□□ -0.76
VCL-205ENST00000478896 RDH12Q96NR8 316 aa10.29□□□□□ -0.76
VCL-205ENST00000478896 RCHY1Q96PM5 261 aa10.29□□□□□ -0.76
VCL-205ENST00000478896 NABP2Q9BQ15 211 aa10.29□□□□□ -0.76
VCL-205ENST00000478896 CST11Q9H112 138 aa10.29□□□□□ -0.76
VCL-205ENST00000478896 S100A14Q9HCY8 104 aa10.29□□□□□ -0.76
VCL-205ENST00000478896 MBNL3Q9NUK0 354 aaKnown RBP10.29□□□□□ -0.76
VCL-205ENST00000478896 YPEL1O60688 119 aa10.28□□□□□ -0.76
VCL-205ENST00000478896 PDCD6O75340 191 aa10.28□□□□□ -0.76
VCL-205ENST00000478896 BAG2O95816 211 aa10.28□□□□□ -0.76
VCL-205ENST00000478896 IGLV1-40P01703 118 aa10.28□□□□□ -0.76
VCL-205ENST00000478896 GLAP06280 429 aa10.28□□□□□ -0.76
VCL-205ENST00000478896 SLURP1P55000 103 aa10.28□□□□□ -0.76
VCL-205ENST00000478896 RPS11P62280 158 aaKnown RBP eCLIP10.28□□□□□ -0.76
VCL-205ENST00000478896 DOC2BQ14184 412 aa10.28□□□□□ -0.76
VCL-205ENST00000478896 OVCH2Q7RTZ1 564 aa10.28□□□□□ -0.76
VCL-205ENST00000478896 ZNF554Q86TJ5 538 aa10.28□□□□□ -0.76
VCL-205ENST00000478896 MUC7Q8TAX7 377 aa10.28□□□□□ -0.76
VCL-205ENST00000478896 MRPL30Q8TCC3 161 aaKnown RBP10.28□□□□□ -0.76
VCL-205ENST00000478896 CYGBQ8WWM9 190 aa10.28□□□□□ -0.76
VCL-205ENST00000478896 IL1F10Q8WWZ1 152 aa10.28□□□□□ -0.76
VCL-205ENST00000478896 RITA1Q96K30 269 aa10.28□□□□□ -0.76
VCL-205ENST00000478896 NEDD4LQ96PU5 975 aa10.28□□□□□ -0.76
VCL-205ENST00000478896 YPEL2Q96QA6 119 aa10.28□□□□□ -0.76
VCL-205ENST00000478896 ALX4Q9H161 411 aaPredicted RBP10.28□□□□□ -0.76
VCL-205ENST00000478896 GHITMQ9H3K2 345 aa10.28□□□□□ -0.76
VCL-205ENST00000478896 ABRACLQ9P1F3 81 aa10.28□□□□□ -0.76
VCL-205ENST00000478896 A3GALT2U3KPV4 340 aa10.28□□□□□ -0.76
VCL-205ENST00000478896 TRBV5-7A0A0A0MS05 114 aa10.27□□□□□ -0.77
VCL-205ENST00000478896 LINC01619G3V211 115 aa10.27□□□□□ -0.77
VCL-205ENST00000478896 MYL12BO14950 172 aa10.27□□□□□ -0.77
VCL-205ENST00000478896 GP9P14770 177 aa10.27□□□□□ -0.77
VCL-205ENST00000478896 SPNP16150 400 aa10.27□□□□□ -0.77
VCL-205ENST00000478896 MAPK3P27361 379 aaPredicted RBP10.27□□□□□ -0.77
VCL-205ENST00000478896 OR3A3P47888 321 aa10.27□□□□□ -0.77
VCL-205ENST00000478896 HTD2P86397 168 aa10.27□□□□□ -0.77
VCL-205ENST00000478896 KIAA0141Q14154 515 aaPredicted RBP10.27□□□□□ -0.77
VCL-205ENST00000478896 SIGIRRQ6IA17 410 aa10.27□□□□□ -0.77
VCL-205ENST00000478896 ZNF833PQ6ZTB9 187 aa10.27□□□□□ -0.77
VCL-205ENST00000478896 C5orf24Q7Z6I8 188 aa10.27□□□□□ -0.77
VCL-205ENST00000478896 SBSPONQ8IVN8 264 aa10.27□□□□□ -0.77
VCL-205ENST00000478896 CDH26Q8IXH8 852 aa10.27□□□□□ -0.77
VCL-205ENST00000478896 SETD9Q8NE22 299 aa10.27□□□□□ -0.77
VCL-205ENST00000478896 OR6Q1Q8NGQ2 317 aa10.27□□□□□ -0.77
VCL-205ENST00000478896 DLX4Q92988 240 aaPredicted RBP10.27□□□□□ -0.77
VCL-205ENST00000478896 CYYR1Q96J86 154 aa10.27□□□□□ -0.77
VCL-205ENST00000478896 DERL3Q96Q80 235 aa10.27□□□□□ -0.77
VCL-205ENST00000478896 ZMAT4Q9H898 229 aa10.27□□□□□ -0.77
VCL-205ENST00000478896 PALMDQ9NP74 551 aa10.27□□□□□ -0.77
VCL-205ENST00000478896 STEAP1Q9UHE8 339 aa10.27□□□□□ -0.77
VCL-205ENST00000478896 NBEAL2Q6ZNJ1 2754 aa10.26□□□□□ -0.77
VCL-205ENST00000478896 SORL1Q92673 2214 aa10.26□□□□□ -0.77
VCL-205ENST00000478896 ST8SIA5O15466 376 aa10.26□□□□□ -0.77
VCL-205ENST00000478896 NDUFA3O95167 84 aa10.26□□□□□ -0.77
VCL-205ENST00000478896 LGALS1P09382 135 aaKnown RBP10.26□□□□□ -0.77
VCL-205ENST00000478896 PITPNAQ00169 270 aa10.26□□□□□ -0.77
VCL-205ENST00000478896 NDPQ00604 133 aa10.26□□□□□ -0.77
VCL-205ENST00000478896 CASC10Q5T4H9 136 aa10.26□□□□□ -0.77
VCL-205ENST00000478896 FAM71F2Q6NXP2 309 aa10.26□□□□□ -0.77
VCL-205ENST00000478896 FAM131AQ6UXB0 335 aa10.26□□□□□ -0.77
VCL-205ENST00000478896 TCTEX1D1Q8N7M0 179 aa10.26□□□□□ -0.77
VCL-205ENST00000478896 MINDY2Q8NBR6 621 aa10.26□□□□□ -0.77
VCL-205ENST00000478896 NPBQ8NG41 125 aa10.26□□□□□ -0.77
VCL-205ENST00000478896 SETD6Q8TBK2 473 aa10.26□□□□□ -0.77
VCL-205ENST00000478896 CASTOR1Q8WTX7 329 aa10.26□□□□□ -0.77
VCL-205ENST00000478896 ARPC1AQ92747 370 aa10.26□□□□□ -0.77
VCL-205ENST00000478896 THRSPQ92748 146 aa10.26□□□□□ -0.77
VCL-205ENST00000478896 UQCC2Q9BRT2 126 aa10.26□□□□□ -0.77
VCL-205ENST00000478896 IFI27L2Q9H2X8 130 aa10.26□□□□□ -0.77
VCL-205ENST00000478896 FBXL15Q9H469 300 aa10.26□□□□□ -0.77
VCL-205ENST00000478896 CHMP1AQ9HD42 196 aaPredicted RBP10.26□□□□□ -0.77
VCL-205ENST00000478896 PIPOXQ9P0Z9 390 aa10.26□□□□□ -0.77
VCL-205ENST00000478896 GHRLQ9UBU3 117 aa10.26□□□□□ -0.77
VCL-205ENST00000478896 FOXA2Q9Y261 457 aaPredicted RBP10.26□□□□□ -0.77
VCL-205ENST00000478896 LRRC42Q9Y546 428 aa10.26□□□□□ -0.77
VCL-205ENST00000478896 IGHV4OR15-8A0A075B7B6 117 aa10.25□□□□□ -0.77
VCL-205ENST00000478896 A0A087WW49 117 aa10.25□□□□□ -0.77
VCL-205ENST00000478896 OR5H14A6NHG9 310 aa10.25□□□□□ -0.77
VCL-205ENST00000478896 RRHO14718 337 aa10.25□□□□□ -0.77
VCL-205ENST00000478896 RAB29O14966 203 aa10.25□□□□□ -0.77
VCL-205ENST00000478896 GSTP1P09211 210 aaKnown RBP10.25□□□□□ -0.77
VCL-205ENST00000478896 OR8U9P0C7N5 309 aa10.25□□□□□ -0.77
VCL-205ENST00000478896 FRMD6-AS1P0C7T7 363 aa10.25□□□□□ -0.77
VCL-205ENST00000478896 CELP19835 753 aa10.25□□□□□ -0.77
VCL-205ENST00000478896 TMEM267Q0VDI3 215 aaPredicted RBP10.25□□□□□ -0.77
VCL-205ENST00000478896 ST3GAL4Q11206 333 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms