RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 OR4F17Q8NGA8 305 aa13.54□□□□□ -0.24
COMMD3-210ENST00000472610 OR4X2Q8NGF9 303 aa13.54□□□□□ -0.24
COMMD3-210ENST00000472610 OR8H1Q8NGG4 311 aa13.54□□□□□ -0.24
COMMD3-210ENST00000472610 SETD6Q8TBK2 473 aa13.54□□□□□ -0.24
COMMD3-210ENST00000472610 OR4F4Q96R69 305 aa13.54□□□□□ -0.24
COMMD3-210ENST00000472610 AK3Q9UIJ7 227 aa13.54□□□□□ -0.24
COMMD3-210ENST00000472610 TMEM272A0A1B0GTI8 110 aa13.53□□□□□ -0.24
COMMD3-210ENST00000472610 NCBP2LA6PVI3 153 aaKnown RBP13.53□□□□□ -0.24
COMMD3-210ENST00000472610 HIST2H2BDQ6DRA6 164 aa13.53□□□□□ -0.24
COMMD3-210ENST00000472610 C22orf42Q6IC83 251 aa13.53□□□□□ -0.24
COMMD3-210ENST00000472610 C5orf24Q7Z6I8 188 aa13.53□□□□□ -0.24
COMMD3-210ENST00000472610 Q8N6K4 173 aa13.53□□□□□ -0.24
COMMD3-210ENST00000472610 OR2AK2Q8NG84 335 aa13.53□□□□□ -0.24
COMMD3-210ENST00000472610 IL1F10Q8WWZ1 152 aa13.53□□□□□ -0.24
COMMD3-210ENST00000472610 ARHGAP5-AS1Q96IT6 56 aa13.53□□□□□ -0.24
COMMD3-210ENST00000472610 PECRQ9BY49 303 aa13.53□□□□□ -0.24
COMMD3-210ENST00000472610 RRP15Q9Y3B9 282 aaKnown RBP13.53□□□□□ -0.24
COMMD3-210ENST00000472610 SHISA3A0PJX4 238 aa13.52□□□□□ -0.25
COMMD3-210ENST00000472610 IGHG2P01859 326 aa13.52□□□□□ -0.25
COMMD3-210ENST00000472610 RAB6AP20340 208 aa13.52□□□□□ -0.25
COMMD3-210ENST00000472610 OR10A3P58181 314 aa13.52□□□□□ -0.25
COMMD3-210ENST00000472610 DEFA6Q01524 100 aa13.52□□□□□ -0.25
COMMD3-210ENST00000472610 ZNF773Q6PK81 442 aa13.52□□□□□ -0.25
COMMD3-210ENST00000472610 CHPT1Q8WUD6 406 aa13.52□□□□□ -0.25
COMMD3-210ENST00000472610 R3HDM4Q96D70 268 aa13.52□□□□□ -0.25
COMMD3-210ENST00000472610 CMSS1Q9BQ75 279 aaKnown RBP13.52□□□□□ -0.25
COMMD3-210ENST00000472610 GHITMQ9H3K2 345 aa13.52□□□□□ -0.25
COMMD3-210ENST00000472610 C12orf4Q9NQ89 552 aa13.52□□□□□ -0.25
COMMD3-210ENST00000472610 LIN7CQ9NUP9 197 aaKnown RBP13.52□□□□□ -0.25
COMMD3-210ENST00000472610 STUB1Q9UNE7 303 aa13.52□□□□□ -0.25
COMMD3-210ENST00000472610 SSR3Q9UNL2 185 aa13.52□□□□□ -0.25
COMMD3-210ENST00000472610 TSSC4Q9Y5U2 329 aaPredicted RBP13.52□□□□□ -0.25
COMMD3-210ENST00000472610 VWFP04275 2813 aa13.52□□□□□ -0.25
COMMD3-210ENST00000472610 TCRBV4S1A1TA0A5B7 111 aa13.51□□□□□ -0.25
COMMD3-210ENST00000472610 ADARB2-AS1A8MUL3 147 aa13.51□□□□□ -0.25
COMMD3-210ENST00000472610 SERPINE3A8MV23 424 aa13.51□□□□□ -0.25
COMMD3-210ENST00000472610 ITGB1BP1O14713 200 aa13.51□□□□□ -0.25
COMMD3-210ENST00000472610 GADD45AP24522 165 aa13.51□□□□□ -0.25
COMMD3-210ENST00000472610 MRPS15P82914 257 aaKnown RBP13.51□□□□□ -0.25
COMMD3-210ENST00000472610 Q6ZPA2 131 aa13.51□□□□□ -0.25
COMMD3-210ENST00000472610 SLC35E3Q7Z769 313 aa13.51□□□□□ -0.25
COMMD3-210ENST00000472610 TPRA1Q86W33 373 aa13.51□□□□□ -0.25
COMMD3-210ENST00000472610 FOXRED2Q8IWF2 684 aa13.51□□□□□ -0.25
COMMD3-210ENST00000472610 ODF3L1Q8IXM7 274 aa13.51□□□□□ -0.25
COMMD3-210ENST00000472610 PTX4Q96A99 478 aa13.51□□□□□ -0.25
COMMD3-210ENST00000472610 RAB3CQ96E17 227 aa13.51□□□□□ -0.25
COMMD3-210ENST00000472610 Q9N2K0 584 aa13.51□□□□□ -0.25
COMMD3-210ENST00000472610 TXNL4BQ9NX01 149 aaKnown RBP13.51□□□□□ -0.25
COMMD3-210ENST00000472610 PIPOXQ9P0Z9 390 aa13.51□□□□□ -0.25
COMMD3-210ENST00000472610 PSMB11A5LHX3 300 aa13.5□□□□□ -0.25
COMMD3-210ENST00000472610 METTL21EPA6NDL7 271 aa13.5□□□□□ -0.25
COMMD3-210ENST00000472610 ZNF736B4DX44 427 aaPredicted RBP13.5□□□□□ -0.25
COMMD3-210ENST00000472610 ZBTB25P24278 435 aa13.5□□□□□ -0.25
COMMD3-210ENST00000472610 HLA-DRB3P79483 266 aa13.5□□□□□ -0.25
COMMD3-210ENST00000472610 LSAMPQ13449 338 aa13.5□□□□□ -0.25
COMMD3-210ENST00000472610 PLAC9Q5JTB6 97 aa13.5□□□□□ -0.25
COMMD3-210ENST00000472610 FAM71F2Q6NXP2 309 aa13.5□□□□□ -0.25
COMMD3-210ENST00000472610 ZNF833PQ6ZTB9 187 aa13.5□□□□□ -0.25
COMMD3-210ENST00000472610 Q8N9W7 124 aa13.5□□□□□ -0.25
COMMD3-210ENST00000472610 EDARADDQ8WWZ3 215 aa13.5□□□□□ -0.25
COMMD3-210ENST00000472610 S1PR3Q99500 378 aa13.5□□□□□ -0.25
COMMD3-210ENST00000472610 RASL11BQ9BPW5 248 aa13.5□□□□□ -0.25
COMMD3-210ENST00000472610 HDHD3Q9BSH5 251 aaPredicted RBP13.5□□□□□ -0.25
COMMD3-210ENST00000472610 ABCG5Q9H222 651 aa13.5□□□□□ -0.25
COMMD3-210ENST00000472610 RAB29O14966 203 aa13.49□□□□□ -0.25
COMMD3-210ENST00000472610 HSPA12AO43301 675 aa13.49□□□□□ -0.25
COMMD3-210ENST00000472610 KCNAB3O43448 404 aa13.49□□□□□ -0.25
COMMD3-210ENST00000472610 CD3GP09693 182 aa13.49□□□□□ -0.25
COMMD3-210ENST00000472610 CEACAM6P40199 344 aa13.49□□□□□ -0.25
COMMD3-210ENST00000472610 SLC35B1P78383 322 aa13.49□□□□□ -0.25
COMMD3-210ENST00000472610 KCTD21Q4G0X4 260 aa13.49□□□□□ -0.25
COMMD3-210ENST00000472610 TCTEX1D4Q5JR98 221 aa13.49□□□□□ -0.25
COMMD3-210ENST00000472610 COMMD1Q8N668 190 aa13.49□□□□□ -0.25
COMMD3-210ENST00000472610 OR10R2Q8NGX6 335 aa13.49□□□□□ -0.25
COMMD3-210ENST00000472610 NABP2Q9BQ15 211 aa13.49□□□□□ -0.25
COMMD3-210ENST00000472610 GON7Q9BXV9 100 aa13.49□□□□□ -0.25
COMMD3-210ENST00000472610 PLSCR3Q9NRY6 295 aa13.49□□□□□ -0.25
COMMD3-210ENST00000472610 SLC23A1Q9UHI7 598 aa13.49□□□□□ -0.25
COMMD3-210ENST00000472610 SAA2-SAA4A0A096LPE2 208 aa13.48□□□□□ -0.25
COMMD3-210ENST00000472610 NOTOA8MTQ0 251 aa13.48□□□□□ -0.25
COMMD3-210ENST00000472610 TRDCB7Z8K6 153 aa13.48□□□□□ -0.25
COMMD3-210ENST00000472610 AP4M1O00189 453 aa13.48□□□□□ -0.25
COMMD3-210ENST00000472610 SAA2P0DJI9 122 aaPredicted RBP13.48□□□□□ -0.25
COMMD3-210ENST00000472610 PLA2G7Q13093 441 aa13.48□□□□□ -0.25
COMMD3-210ENST00000472610 ARL6IP1Q15041 203 aa13.48□□□□□ -0.25
COMMD3-210ENST00000472610 IFI27L2Q9H2X8 130 aa13.48□□□□□ -0.25
COMMD3-210ENST00000472610 MEGF8Q7Z7M0 2845 aa13.48□□□□□ -0.25
COMMD3-210ENST00000472610 PLXNB1O43157 2135 aa13.48□□□□□ -0.25
COMMD3-210ENST00000472610 A0A1W2PRX2 142 aa13.47□□□□□ -0.25
COMMD3-210ENST00000472610 RAB27BO00194 218 aa13.47□□□□□ -0.25
COMMD3-210ENST00000472610 ST8SIA5O15466 376 aa13.47□□□□□ -0.25
COMMD3-210ENST00000472610 WIPF1O43516 503 aa13.47□□□□□ -0.25
COMMD3-210ENST00000472610 SCTP09683 121 aa13.47□□□□□ -0.25
COMMD3-210ENST00000472610 PF4V1P10720 104 aa13.47□□□□□ -0.25
COMMD3-210ENST00000472610 GPR12P47775 334 aa13.47□□□□□ -0.25
COMMD3-210ENST00000472610 OR3A3P47888 321 aa13.47□□□□□ -0.25
COMMD3-210ENST00000472610 F2RL1P55085 397 aa13.47□□□□□ -0.25
COMMD3-210ENST00000472610 MOGAT2Q3SYC2 334 aa13.47□□□□□ -0.25
COMMD3-210ENST00000472610 C10orf99Q6UWK7 81 aa13.47□□□□□ -0.25
COMMD3-210ENST00000472610 NR2C2APQ86WQ0 139 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms