RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 COL8A2P25067 703 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 SUMO1P63165 101 aaKnown RBP6.47□□□□□ -1.37
HDAC9-214ENST00000441542 ACTL10Q5JWF8 245 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 LYG1Q8N1E2 194 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 ZNF596Q8TC21 504 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 OIT3Q8WWZ8 545 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 PSMF1Q92530 271 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 TMEM140Q9NV12 185 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 PSENENQ9NZ42 101 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 KLRF1Q9NZS2 232 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 CACNG5Q9UF02 275 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 SPTBN5Q9NRC6 3674 aaKnown RBP6.46□□□□□ -1.37
HDAC9-214ENST00000441542 AQP7P3A6NL99 342 aa6.46□□□□□ -1.37
HDAC9-214ENST00000441542 ZNF814B7Z6K7 855 aa6.46□□□□□ -1.37
HDAC9-214ENST00000441542 DIRC3C9JPN6 131 aa6.46□□□□□ -1.37
HDAC9-214ENST00000441542 CLDN1O95832 211 aa6.46□□□□□ -1.37
HDAC9-214ENST00000441542 HNRNPA2B1P22626 353 aaKnown RBP6.46□□□□□ -1.37
HDAC9-214ENST00000441542 CCNOP22674 350 aa6.46□□□□□ -1.37
HDAC9-214ENST00000441542 TPPP2P59282 170 aa6.46□□□□□ -1.37
HDAC9-214ENST00000441542 EIF3IQ13347 325 aaKnown RBP6.46□□□□□ -1.37
HDAC9-214ENST00000441542 GAB4Q2WGN9 574 aa6.46□□□□□ -1.37
HDAC9-214ENST00000441542 SNAI3Q3KNW1 292 aa6.46□□□□□ -1.37
HDAC9-214ENST00000441542 FBXW9Q5XUX1 488 aa6.46□□□□□ -1.37
HDAC9-214ENST00000441542 ABLIM2Q6H8Q1 611 aa6.46□□□□□ -1.37
HDAC9-214ENST00000441542 COLCA1Q6ZS62 124 aa6.46□□□□□ -1.37
HDAC9-214ENST00000441542 Q6ZSR6 202 aa6.46□□□□□ -1.37
HDAC9-214ENST00000441542 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.46□□□□□ -1.37
HDAC9-214ENST00000441542 MRGPRGQ86SM5 289 aa6.46□□□□□ -1.37
HDAC9-214ENST00000441542 C9orf40Q8IXQ3 194 aa6.46□□□□□ -1.37
HDAC9-214ENST00000441542 FAM89BQ8N5H3 189 aa6.46□□□□□ -1.37
HDAC9-214ENST00000441542 STARD4Q96DR4 205 aa6.46□□□□□ -1.37
HDAC9-214ENST00000441542 OR4C12Q96R67 309 aa6.46□□□□□ -1.37
HDAC9-214ENST00000441542 GPR35Q9HC97 309 aa6.46□□□□□ -1.37
HDAC9-214ENST00000441542 KCNS2Q9ULS6 477 aa6.46□□□□□ -1.37
HDAC9-214ENST00000441542 SLC17A3O00476 420 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 TNFSF13O75888 250 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 KBTBD11O94819 623 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 IGKV1D-33P01593 117 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 IGKV1-33P01594 117 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 IGHG1P01857 330 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 CLPSP04118 112 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 CRISP2P16562 243 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 ECI1P42126 302 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 AMTP48728 403 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 TCL1AP56279 114 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 LDLRAD2Q5SZI1 272 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 CYP2G1PQ6ZSU1 146 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 FAM19A2Q8N3H0 131 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 OR5AU1Q8NGC0 362 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 OR2V1Q8NHB1 315 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 ZNF501Q96CX3 271 aaPredicted RBP6.46□□□□□ -1.38
HDAC9-214ENST00000441542 TMEM222Q9H0R3 208 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 COPS7AQ9UBW8 275 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 PPP1R3CQ9UQK1 317 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 VSTM2BA6NLU5 285 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 CD300LBA8K4G0 201 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 G3V3Y1 287 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 ETV2O00321 342 aaPredicted RBP6.46□□□□□ -1.38
HDAC9-214ENST00000441542 NDUFB4O95168 129 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 NDUFB8O95169 186 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 APODP05090 189 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 IER3P46695 156 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 RIPPLY3P57055 190 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 ZNF90Q03938 601 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 BAXQ07812 192 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 MALLQ13021 153 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 MRPL49Q13405 166 aaKnown RBP6.46□□□□□ -1.38
HDAC9-214ENST00000441542 MSMO1Q15800 293 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 Q5PR19 223 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 LCN12Q6JVE5 192 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 SIGLECL1Q8N7X8 197 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 NUDT10Q8NFP7 164 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 OR2M3Q8NG83 312 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 OR13H1Q8NG92 308 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 DNASE2BQ8WZ79 361 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 BMFQ96LC9 184 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 Q96M66 194 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 SLC46A1Q96NT5 459 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 ANGPTL4Q9BY76 406 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 IGFLR1Q9H665 355 aa6.46□□□□□ -1.38
HDAC9-214ENST00000441542 CFAP54Q96N23 3096 aa6.45□□□□□ -1.38
HDAC9-214ENST00000441542 NAPSAO96009 420 aa6.45□□□□□ -1.38
HDAC9-214ENST00000441542 PSG2P11465 335 aa6.45□□□□□ -1.38
HDAC9-214ENST00000441542 ZNF133P52736 654 aaPredicted RBP6.45□□□□□ -1.38
HDAC9-214ENST00000441542 ASPHD1Q5U4P2 390 aa6.45□□□□□ -1.38
HDAC9-214ENST00000441542 RPP25LQ8N5L8 163 aaKnown RBP6.45□□□□□ -1.38
HDAC9-214ENST00000441542 ZNF114Q8NC26 417 aa6.45□□□□□ -1.38
HDAC9-214ENST00000441542 GPR146Q96CH1 333 aa6.45□□□□□ -1.38
HDAC9-214ENST00000441542 ZNF48Q96MX3 618 aaPredicted RBP6.45□□□□□ -1.38
HDAC9-214ENST00000441542 IL36RNQ9UBH0 155 aa6.45□□□□□ -1.38
HDAC9-214ENST00000441542 R4GN57 208 aa6.45□□□□□ -1.38
HDAC9-214ENST00000441542 TRIOO75962 3097 aa6.45□□□□□ -1.38
HDAC9-214ENST00000441542 DUXBA0A1W2PPF3 345 aa6.45□□□□□ -1.38
HDAC9-214ENST00000441542 ADH1BP00325 375 aa6.45□□□□□ -1.38
HDAC9-214ENST00000441542 CA3P07451 260 aa6.45□□□□□ -1.38
HDAC9-214ENST00000441542 NPBWR2P48146 333 aa6.45□□□□□ -1.38
HDAC9-214ENST00000441542 ARL4DP49703 201 aa6.45□□□□□ -1.38
HDAC9-214ENST00000441542 PAX9P55771 341 aa6.45□□□□□ -1.38
HDAC9-214ENST00000441542 TPTE2P1Q5T6R2 138 aa6.45□□□□□ -1.38
HDAC9-214ENST00000441542 PRSS57Q6UWY2 283 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms