RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 SUCNR1Q9BXA5 334 aa18.28■□□□□ 0.52
VSX1-205ENST00000429762 UBE2J1Q9Y385 318 aaPredicted RBP18.28■□□□□ 0.52
VSX1-205ENST00000429762 SSTR2P30874 369 aa18.27■□□□□ 0.52
VSX1-205ENST00000429762 ERVFRD-1P60508 538 aa18.27■□□□□ 0.52
VSX1-205ENST00000429762 ZNF273Q14593 569 aa18.27■□□□□ 0.52
VSX1-205ENST00000429762 PPP1R1CQ8WVI7 109 aa18.27■□□□□ 0.52
VSX1-205ENST00000429762 PSG11Q9UQ72 335 aa18.27■□□□□ 0.52
VSX1-205ENST00000429762 DVL1O14640 695 aa18.26■□□□□ 0.51
VSX1-205ENST00000429762 HTD2P86397 168 aa18.26■□□□□ 0.51
VSX1-205ENST00000429762 IFITM2Q01629 132 aa18.26■□□□□ 0.51
VSX1-205ENST00000429762 LGALSLQ3ZCW2 172 aaPredicted RBP18.26■□□□□ 0.51
VSX1-205ENST00000429762 ABHD14BQ96IU4 210 aa18.26■□□□□ 0.51
VSX1-205ENST00000429762 GSKIPQ9P0R6 139 aa18.26■□□□□ 0.51
VSX1-205ENST00000429762 USP9XQ93008 2570 aaPredicted RBP18.26■□□□□ 0.51
VSX1-205ENST00000429762 NDUFB3O43676 98 aa18.26■□□□□ 0.51
VSX1-205ENST00000429762 NDUFS7O75251 213 aa18.26■□□□□ 0.51
VSX1-205ENST00000429762 MMP23AO75900 390 aa18.26■□□□□ 0.51
VSX1-205ENST00000429762 ZNF16P17020 682 aaPredicted RBP18.26■□□□□ 0.51
VSX1-205ENST00000429762 LOXL3P58215 753 aa18.26■□□□□ 0.51
VSX1-205ENST00000429762 TMEM268Q5VZI3 342 aa18.26■□□□□ 0.51
VSX1-205ENST00000429762 C18orf12Q96KH6 178 aa18.26■□□□□ 0.51
VSX1-205ENST00000429762 TMEM222Q9H0R3 208 aa18.26■□□□□ 0.51
VSX1-205ENST00000429762 YLPM1P49750 1951 aaKnown RBP18.25■□□□□ 0.51
VSX1-205ENST00000429762 KBTBD11-OT1A0A1B0GTJ5 212 aa18.25■□□□□ 0.51
VSX1-205ENST00000429762 TSC22D2O75157 780 aa18.25■□□□□ 0.51
VSX1-205ENST00000429762 SRSF1Q07955 248 aaKnown RBP eCLIP18.25■□□□□ 0.51
VSX1-205ENST00000429762 PRAMEF5Q5TYX0 476 aa18.25■□□□□ 0.51
VSX1-205ENST00000429762 BTNL3Q6UXE8 466 aa18.25■□□□□ 0.51
VSX1-205ENST00000429762 LGI3Q8N145 548 aa18.25■□□□□ 0.51
VSX1-205ENST00000429762 TOLLIPQ9H0E2 274 aa18.25■□□□□ 0.51
VSX1-205ENST00000429762 NCOR1P1Q9H4R4 102 aa18.25■□□□□ 0.51
VSX1-205ENST00000429762 CLN8Q9UBY8 286 aa18.25■□□□□ 0.51
VSX1-205ENST00000429762 A0A1W2PPE3 182 aa18.24■□□□□ 0.51
VSX1-205ENST00000429762 F2RL2O00254 374 aa18.24■□□□□ 0.51
VSX1-205ENST00000429762 ARPC5O15511 151 aa18.24■□□□□ 0.51
VSX1-205ENST00000429762 IGHV2-70P01814 119 aa18.24■□□□□ 0.51
VSX1-205ENST00000429762 DAOP14920 347 aa18.24■□□□□ 0.51
VSX1-205ENST00000429762 CCL3L1P16619 93 aa18.24■□□□□ 0.51
VSX1-205ENST00000429762 CXCL2P19875 107 aa18.24■□□□□ 0.51
VSX1-205ENST00000429762 NFYBP25208 207 aa18.24■□□□□ 0.51
VSX1-205ENST00000429762 RPL31P62899 125 aaKnown RBP18.24■□□□□ 0.51
VSX1-205ENST00000429762 MORN2Q502X0 79 aa18.24■□□□□ 0.51
VSX1-205ENST00000429762 SLC35G3Q8N808 338 aa18.24■□□□□ 0.51
VSX1-205ENST00000429762 COMMD9Q9P000 198 aa18.24■□□□□ 0.51
VSX1-205ENST00000429762 JPT1Q9UK76 154 aa18.24■□□□□ 0.51
VSX1-205ENST00000429762 SLC31A2O15432 143 aa18.24■□□□□ 0.51
VSX1-205ENST00000429762 RGS11O94810 467 aa18.24■□□□□ 0.51
VSX1-205ENST00000429762 F2RP25116 425 aa18.24■□□□□ 0.51
VSX1-205ENST00000429762 LRRC10Q5BKY1 277 aa18.24■□□□□ 0.51
VSX1-205ENST00000429762 ZNF645Q8N7E2 425 aa18.24■□□□□ 0.51
VSX1-205ENST00000429762 ASB13Q8WXK3 278 aa18.24■□□□□ 0.51
VSX1-205ENST00000429762 DOPEY1Q5JWR5 2465 aa18.23■□□□□ 0.51
VSX1-205ENST00000429762 S100GP29377 79 aa18.23■□□□□ 0.51
VSX1-205ENST00000429762 IAH1Q2TAA2 248 aaPredicted RBP18.23■□□□□ 0.51
VSX1-205ENST00000429762 SELENOHQ8IZQ5 122 aaKnown RBP18.23■□□□□ 0.51
VSX1-205ENST00000429762 C2orf50Q96LR7 162 aa18.23■□□□□ 0.51
VSX1-205ENST00000429762 COL12A1Q99715 3063 aa18.23■□□□□ 0.51
VSX1-205ENST00000429762 hADV38S2A0JD32 116 aa18.22■□□□□ 0.51
VSX1-205ENST00000429762 H0Y980 276 aa18.22■□□□□ 0.51
VSX1-205ENST00000429762 PPIHO43447 177 aaKnown RBP18.22■□□□□ 0.51
VSX1-205ENST00000429762 KCNAB3O43448 404 aa18.22■□□□□ 0.51
VSX1-205ENST00000429762 ZNF134P52741 427 aa18.22■□□□□ 0.51
VSX1-205ENST00000429762 LINC00205P59089 165 aa18.22■□□□□ 0.51
VSX1-205ENST00000429762 LRTM2Q8N967 370 aa18.22■□□□□ 0.51
VSX1-205ENST00000429762 NEU4Q8WWR8 484 aaPredicted RBP18.22■□□□□ 0.51
VSX1-205ENST00000429762 AKR1E2Q96JD6 320 aa18.22■□□□□ 0.51
VSX1-205ENST00000429762 NMES1Q9C002 83 aa18.22■□□□□ 0.51
VSX1-205ENST00000429762 USF3Q68DE3 2245 aa18.22■□□□□ 0.51
VSX1-205ENST00000429762 IFNA21P01568 189 aa18.22■□□□□ 0.51
VSX1-205ENST00000429762 Q3ZCU0 254 aa18.22■□□□□ 0.51
VSX1-205ENST00000429762 OR2B11Q5JQS5 317 aa18.22■□□□□ 0.51
VSX1-205ENST00000429762 TMEM200BQ69YZ2 307 aa18.22■□□□□ 0.51
VSX1-205ENST00000429762 ZNF695Q8IW36 515 aa18.22■□□□□ 0.51
VSX1-205ENST00000429762 ZBTB8BQ8NAP8 495 aaPredicted RBP18.22■□□□□ 0.51
VSX1-205ENST00000429762 GFOD1Q9NXC2 390 aa18.22■□□□□ 0.51
VSX1-205ENST00000429762 IDI2-AS1Q9NZ38 188 aa18.22■□□□□ 0.51
VSX1-205ENST00000429762 KAAG1Q9UBP8 84 aa18.22■□□□□ 0.51
VSX1-205ENST00000429762 MYO18BQ8IUG5 2567 aa18.22■□□□□ 0.51
VSX1-205ENST00000429762 SPTAN1Q13813 2472 aaKnown RBP18.21■□□□□ 0.51
VSX1-205ENST00000429762 ZNF729A6NN14 1252 aaPredicted RBP18.21■□□□□ 0.51
VSX1-205ENST00000429762 MPC2O95563 127 aa18.21■□□□□ 0.51
VSX1-205ENST00000429762 UCP1P25874 307 aa18.21■□□□□ 0.51
VSX1-205ENST00000429762 GNG10P50151 68 aa18.21■□□□□ 0.51
VSX1-205ENST00000429762 RPL30P62888 115 aaKnown RBP18.21■□□□□ 0.51
VSX1-205ENST00000429762 FOXRED2Q8IWF2 684 aa18.21■□□□□ 0.51
VSX1-205ENST00000429762 CORO2AQ92828 525 aa18.21■□□□□ 0.51
VSX1-205ENST00000429762 NARFLQ9H6Q4 476 aa18.21■□□□□ 0.51
VSX1-205ENST00000429762 MBD2Q9UBB5 411 aa18.21■□□□□ 0.51
VSX1-205ENST00000429762 LINC00312Q9Y6C7 94 aa18.21■□□□□ 0.51
VSX1-205ENST00000429762 ARID1AO14497 2285 aa18.21■□□□□ 0.51
VSX1-205ENST00000429762 YPEL1O60688 119 aa18.21■□□□□ 0.5
VSX1-205ENST00000429762 S100A10P60903 97 aa18.21■□□□□ 0.5
VSX1-205ENST00000429762 C11orf87Q6NUJ2 197 aa18.21■□□□□ 0.5
VSX1-205ENST00000429762 TMEM56Q96MV1 263 aa18.21■□□□□ 0.5
VSX1-205ENST00000429762 YPEL2Q96QA6 119 aa18.21■□□□□ 0.5
VSX1-205ENST00000429762 AGMATQ9BSE5 352 aa18.21■□□□□ 0.5
VSX1-205ENST00000429762 SDHAF2Q9NX18 166 aa18.21■□□□□ 0.5
VSX1-205ENST00000429762 TMEM56-RWDD3S4R434 201 aa18.21■□□□□ 0.5
VSX1-205ENST00000429762 SCGB1D2O95969 90 aa18.2■□□□□ 0.5
VSX1-205ENST00000429762 PSMB6P28072 239 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms