RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 MDP1Q86V88 176 aa11.28□□□□□ -0.6
SNRNP200-202ENST00000429650 BCL2L2Q92843 193 aaPredicted RBP11.28□□□□□ -0.6
SNRNP200-202ENST00000429650 LSM10Q969L4 123 aaKnown RBP11.28□□□□□ -0.6
SNRNP200-202ENST00000429650 GP6Q9HCN6 339 aa11.28□□□□□ -0.6
SNRNP200-202ENST00000429650 CACNG5Q9UF02 275 aa11.28□□□□□ -0.6
SNRNP200-202ENST00000429650 R4GN57 208 aa11.28□□□□□ -0.6
SNRNP200-202ENST00000429650 A0A087WWC5 75 aa11.28□□□□□ -0.6
SNRNP200-202ENST00000429650 LRP5LA4QPB2 252 aa11.28□□□□□ -0.6
SNRNP200-202ENST00000429650 AP4M1O00189 453 aa11.28□□□□□ -0.6
SNRNP200-202ENST00000429650 BMI1P35226 326 aa11.28□□□□□ -0.6
SNRNP200-202ENST00000429650 RAB2AP61019 212 aa11.28□□□□□ -0.6
SNRNP200-202ENST00000429650 UBE2KP61086 200 aa11.28□□□□□ -0.6
SNRNP200-202ENST00000429650 SLC25A24Q6NUK1 477 aa11.28□□□□□ -0.6
SNRNP200-202ENST00000429650 P4HA3Q7Z4N8 544 aa11.28□□□□□ -0.6
SNRNP200-202ENST00000429650 COLQQ9Y215 455 aaPredicted RBP11.28□□□□□ -0.6
SNRNP200-202ENST00000429650 TRAV1-1A0A0B4J248 108 aa11.27□□□□□ -0.6
SNRNP200-202ENST00000429650 A0A1W2PR80 420 aa11.27□□□□□ -0.6
SNRNP200-202ENST00000429650 IFNA17P01571 189 aa11.27□□□□□ -0.6
SNRNP200-202ENST00000429650 IGKV1-5P01602 117 aa11.27□□□□□ -0.6
SNRNP200-202ENST00000429650 SP1P08047 785 aa11.27□□□□□ -0.6
SNRNP200-202ENST00000429650 MDH2P40926 338 aaKnown RBP11.27□□□□□ -0.6
SNRNP200-202ENST00000429650 DLK1P80370 383 aa11.27□□□□□ -0.6
SNRNP200-202ENST00000429650 KHDC3LQ587J8 217 aa11.27□□□□□ -0.6
SNRNP200-202ENST00000429650 MOB1BQ7L9L4 216 aa11.27□□□□□ -0.6
SNRNP200-202ENST00000429650 WDR86Q86TI4 376 aa11.27□□□□□ -0.6
SNRNP200-202ENST00000429650 PRR18Q8N4B5 295 aa11.27□□□□□ -0.6
SNRNP200-202ENST00000429650 TREM2Q9NZC2 230 aa11.27□□□□□ -0.6
SNRNP200-202ENST00000429650 PPP1R3CQ9UQK1 317 aa11.27□□□□□ -0.6
SNRNP200-202ENST00000429650 SIRPB1O00241 398 aa11.27□□□□□ -0.61
SNRNP200-202ENST00000429650 SYNGR2O43760 224 aa11.27□□□□□ -0.61
SNRNP200-202ENST00000429650 OR2H2O95918 312 aa11.27□□□□□ -0.61
SNRNP200-202ENST00000429650 IAPPP10997 89 aa11.27□□□□□ -0.61
SNRNP200-202ENST00000429650 ZNF497Q6ZNH5 498 aa11.27□□□□□ -0.61
SNRNP200-202ENST00000429650 NANOS1Q8WY41 292 aaKnown RBP11.27□□□□□ -0.61
SNRNP200-202ENST00000429650 TCEAL7Q9BRU2 100 aa11.27□□□□□ -0.61
SNRNP200-202ENST00000429650 RSG1Q9BU20 258 aa11.27□□□□□ -0.61
SNRNP200-202ENST00000429650 LOC102723971A0A1B0GUV8 181 aa11.26□□□□□ -0.61
SNRNP200-202ENST00000429650 MPLP40238 635 aa11.26□□□□□ -0.61
SNRNP200-202ENST00000429650 GNG10P50151 68 aa11.26□□□□□ -0.61
SNRNP200-202ENST00000429650 ARL16Q0P5N6 197 aa11.26□□□□□ -0.61
SNRNP200-202ENST00000429650 ZNF585BQ52M93 769 aa11.26□□□□□ -0.61
SNRNP200-202ENST00000429650 FBXW9Q5XUX1 488 aa11.26□□□□□ -0.61
SNRNP200-202ENST00000429650 VASH2Q86V25 355 aa11.26□□□□□ -0.61
SNRNP200-202ENST00000429650 UBALD1Q8TB05 177 aa11.26□□□□□ -0.61
SNRNP200-202ENST00000429650 TVP23CQ96ET8 276 aa11.26□□□□□ -0.61
SNRNP200-202ENST00000429650 ZNF251Q9BRH9 671 aa11.26□□□□□ -0.61
SNRNP200-202ENST00000429650 NIPSNAP3BQ9BS92 247 aa11.26□□□□□ -0.61
SNRNP200-202ENST00000429650 RTL8AQ9BWD3 113 aa11.26□□□□□ -0.61
SNRNP200-202ENST00000429650 KLF13Q9Y2Y9 288 aaPredicted RBP11.26□□□□□ -0.61
SNRNP200-202ENST00000429650 MMP24Q9Y5R2 645 aa11.26□□□□□ -0.61
SNRNP200-202ENST00000429650 METTL15P1P0C7V9 234 aa11.26□□□□□ -0.61
SNRNP200-202ENST00000429650 RPS10P46783 165 aaKnown RBP11.26□□□□□ -0.61
SNRNP200-202ENST00000429650 ERVK11-1P61568 191 aa11.26□□□□□ -0.61
SNRNP200-202ENST00000429650 ZNF525Q8N782 197 aa11.26□□□□□ -0.61
SNRNP200-202ENST00000429650 SCCPDHQ8NBX0 429 aa11.26□□□□□ -0.61
SNRNP200-202ENST00000429650 MDS2Q8NDY4 140 aa11.26□□□□□ -0.61
SNRNP200-202ENST00000429650 GUCD1Q96NT3 240 aa11.26□□□□□ -0.61
SNRNP200-202ENST00000429650 ARRDC1-AS1Q9H2J1 176 aa11.26□□□□□ -0.61
SNRNP200-202ENST00000429650 RPRMQ9NS64 109 aa11.26□□□□□ -0.61
SNRNP200-202ENST00000429650 PSENENQ9NZ42 101 aa11.26□□□□□ -0.61
SNRNP200-202ENST00000429650 TRAPPC2LQ9UL33 140 aa11.26□□□□□ -0.61
SNRNP200-202ENST00000429650 TECTAO75443 2155 aa11.26□□□□□ -0.61
SNRNP200-202ENST00000429650 ATXN7O15265 892 aaPredicted RBP11.25□□□□□ -0.61
SNRNP200-202ENST00000429650 SLC10A1Q14973 349 aa11.25□□□□□ -0.61
SNRNP200-202ENST00000429650 ELOBQ15370 118 aa11.25□□□□□ -0.61
SNRNP200-202ENST00000429650 ZNF343Q6P1L6 599 aa11.25□□□□□ -0.61
SNRNP200-202ENST00000429650 HAPLN4Q86UW8 402 aa11.25□□□□□ -0.61
SNRNP200-202ENST00000429650 MYPOPQ86VE0 399 aaPredicted RBP11.25□□□□□ -0.61
SNRNP200-202ENST00000429650 SCGB1C1Q8TD33 95 aa11.25□□□□□ -0.61
SNRNP200-202ENST00000429650 LIN7CQ9NUP9 197 aaKnown RBP11.25□□□□□ -0.61
SNRNP200-202ENST00000429650 GNG13Q9P2W3 67 aa11.25□□□□□ -0.61
SNRNP200-202ENST00000429650 IL17BQ9UHF5 180 aa11.25□□□□□ -0.61
SNRNP200-202ENST00000429650 KCNS2Q9ULS6 477 aa11.25□□□□□ -0.61
SNRNP200-202ENST00000429650 RBM7Q9Y580 266 aaKnown RBP11.25□□□□□ -0.61
SNRNP200-202ENST00000429650 KLRC4-KLRK1H3BQV0 150 aa11.25□□□□□ -0.61
SNRNP200-202ENST00000429650 CASP6P55212 293 aa11.25□□□□□ -0.61
SNRNP200-202ENST00000429650 TBC1D28Q2M2D7 210 aa11.25□□□□□ -0.61
SNRNP200-202ENST00000429650 SLC35E3Q7Z769 313 aa11.25□□□□□ -0.61
SNRNP200-202ENST00000429650 Q8IYB0 196 aa11.25□□□□□ -0.61
SNRNP200-202ENST00000429650 OR10G4Q8NGN3 311 aa11.25□□□□□ -0.61
SNRNP200-202ENST00000429650 Q8WTZ3 238 aa11.25□□□□□ -0.61
SNRNP200-202ENST00000429650 TCTEX1D2Q8WW35 142 aa11.25□□□□□ -0.61
SNRNP200-202ENST00000429650 VSIRQ9H7M9 311 aa11.25□□□□□ -0.61
SNRNP200-202ENST00000429650 NIT2Q9NQR4 276 aa11.25□□□□□ -0.61
SNRNP200-202ENST00000429650 CELA3BP08861 270 aa11.24□□□□□ -0.61
SNRNP200-202ENST00000429650 EIF2S3P41091 472 aaKnown RBP11.24□□□□□ -0.61
SNRNP200-202ENST00000429650 SPCS3P61009 180 aa11.24□□□□□ -0.61
SNRNP200-202ENST00000429650 FAM216AQ8WUB2 273 aa11.24□□□□□ -0.61
SNRNP200-202ENST00000429650 WDYHV1Q96HA8 205 aa11.24□□□□□ -0.61
SNRNP200-202ENST00000429650 DEFB127Q9H1M4 99 aa11.24□□□□□ -0.61
SNRNP200-202ENST00000429650 MBNL3Q9NUK0 354 aaKnown RBP11.24□□□□□ -0.61
SNRNP200-202ENST00000429650 POLDIP2Q9Y2S7 368 aa11.24□□□□□ -0.61
SNRNP200-202ENST00000429650 EP300Q09472 2414 aaPredicted RBP11.24□□□□□ -0.61
SNRNP200-202ENST00000429650 KIAA2026Q5HYC2 2103 aa11.24□□□□□ -0.61
SNRNP200-202ENST00000429650 LNP1A1A4G5 178 aa11.24□□□□□ -0.61
SNRNP200-202ENST00000429650 PPIHO43447 177 aaKnown RBP11.24□□□□□ -0.61
SNRNP200-202ENST00000429650 WDR1O75083 606 aa11.24□□□□□ -0.61
SNRNP200-202ENST00000429650 CXCL1P09341 107 aa11.24□□□□□ -0.61
SNRNP200-202ENST00000429650 CD200P41217 278 aa11.24□□□□□ -0.61
SNRNP200-202ENST00000429650 ERVFRD-1P60508 538 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 721.7 ms