RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 SPRY4Q9C004 299 aa13.36□□□□□ -0.27
CDH1-202ENST00000422392 DOK5Q9P104 306 aa13.36□□□□□ -0.27
CDH1-202ENST00000422392 CDIPTO14735 213 aa13.36□□□□□ -0.27
CDH1-202ENST00000422392 HBE1P02100 147 aa13.36□□□□□ -0.27
CDH1-202ENST00000422392 MEOX1P50221 254 aa13.36□□□□□ -0.27
CDH1-202ENST00000422392 RAB2AP61019 212 aa13.36□□□□□ -0.27
CDH1-202ENST00000422392 PDZD11Q5EBL8 140 aa13.36□□□□□ -0.27
CDH1-202ENST00000422392 CDPF1Q6NVV7 123 aa13.36□□□□□ -0.27
CDH1-202ENST00000422392 ZNF525Q8N782 197 aa13.36□□□□□ -0.27
CDH1-202ENST00000422392 SCCPDHQ8NBX0 429 aa13.36□□□□□ -0.27
CDH1-202ENST00000422392 OR14J1Q9UGF5 321 aa13.36□□□□□ -0.27
CDH1-202ENST00000422392 IL17BQ9UHF5 180 aa13.36□□□□□ -0.27
CDH1-202ENST00000422392 TRGC2P03986 189 aa13.35□□□□□ -0.27
CDH1-202ENST00000422392 CEACAM6P40199 344 aa13.35□□□□□ -0.27
CDH1-202ENST00000422392 LILRB2Q8N423 598 aa13.35□□□□□ -0.27
CDH1-202ENST00000422392 IER2Q9BTL4 223 aa13.35□□□□□ -0.27
CDH1-202ENST00000422392 OR2J1Q9GZK6 312 aa13.35□□□□□ -0.27
CDH1-202ENST00000422392 RNF150Q9ULK6 438 aa13.35□□□□□ -0.27
CDH1-202ENST00000422392 A0A087WWC5 75 aa13.35□□□□□ -0.27
CDH1-202ENST00000422392 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.35□□□□□ -0.27
CDH1-202ENST00000422392 J3QT63 122 aa13.35□□□□□ -0.27
CDH1-202ENST00000422392 GFI1BQ5VTD9 330 aa13.35□□□□□ -0.27
CDH1-202ENST00000422392 BEND4Q6ZU67 534 aa13.35□□□□□ -0.27
CDH1-202ENST00000422392 RCC1LQ96I51 464 aaKnown RBP13.35□□□□□ -0.27
CDH1-202ENST00000422392 GGACTQ9BVM4 153 aa13.35□□□□□ -0.27
CDH1-202ENST00000422392 STRADBQ9C0K7 418 aa13.35□□□□□ -0.27
CDH1-202ENST00000422392 OR51M1Q9H341 326 aa13.35□□□□□ -0.27
CDH1-202ENST00000422392 TMPRSS5Q9H3S3 457 aa13.35□□□□□ -0.27
CDH1-202ENST00000422392 HMGB3O15347 200 aaKnown RBP13.34□□□□□ -0.27
CDH1-202ENST00000422392 TFF1P04155 84 aa13.34□□□□□ -0.27
CDH1-202ENST00000422392 HOXA5P20719 270 aa13.34□□□□□ -0.27
CDH1-202ENST00000422392 GLIPR1P48060 266 aa13.34□□□□□ -0.27
CDH1-202ENST00000422392 OR8G2PQ6IF36 304 aa13.34□□□□□ -0.27
CDH1-202ENST00000422392 CXorf67Q86X51 503 aaPredicted RBP13.34□□□□□ -0.27
CDH1-202ENST00000422392 DRAM1Q8N682 238 aa13.34□□□□□ -0.27
CDH1-202ENST00000422392 SSX3Q99909 188 aa13.34□□□□□ -0.27
CDH1-202ENST00000422392 UBE2L5PA0A1B0GUS4 154 aa13.34□□□□□ -0.27
CDH1-202ENST00000422392 HIST1H2BKO60814 126 aa13.34□□□□□ -0.27
CDH1-202ENST00000422392 HIST1H2BJP06899 126 aa13.34□□□□□ -0.27
CDH1-202ENST00000422392 BCL2P10415 239 aa13.34□□□□□ -0.27
CDH1-202ENST00000422392 HIST1H2BOP23527 126 aa13.34□□□□□ -0.27
CDH1-202ENST00000422392 HIST1H2BBP33778 126 aa13.34□□□□□ -0.27
CDH1-202ENST00000422392 HIST1H2BDP58876 126 aa13.34□□□□□ -0.27
CDH1-202ENST00000422392 RPS16P62249 146 aaKnown RBP13.34□□□□□ -0.27
CDH1-202ENST00000422392 HIST1H2BCP62807 126 aa13.34□□□□□ -0.27
CDH1-202ENST00000422392 HIST2H2BEQ16778 126 aa13.34□□□□□ -0.27
CDH1-202ENST00000422392 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.34□□□□□ -0.27
CDH1-202ENST00000422392 ZNF497Q6ZNH5 498 aa13.34□□□□□ -0.27
CDH1-202ENST00000422392 SLC35E3Q7Z769 313 aa13.34□□□□□ -0.27
CDH1-202ENST00000422392 HIST1H2BHQ93079 126 aa13.34□□□□□ -0.27
CDH1-202ENST00000422392 OR4C12Q96R67 309 aa13.34□□□□□ -0.27
CDH1-202ENST00000422392 HIST1H2BNQ99877 126 aa13.34□□□□□ -0.27
CDH1-202ENST00000422392 HIST1H2BMQ99879 126 aa13.34□□□□□ -0.27
CDH1-202ENST00000422392 PKIBQ9C010 78 aa13.34□□□□□ -0.27
CDH1-202ENST00000422392 TOLLIPQ9H0E2 274 aa13.34□□□□□ -0.27
CDH1-202ENST00000422392 OPA3Q9H6K4 179 aa13.34□□□□□ -0.27
CDH1-202ENST00000422392 SVILO95425 2214 aa13.34□□□□□ -0.27
CDH1-202ENST00000422392 RAMP3O60896 148 aa13.33□□□□□ -0.27
CDH1-202ENST00000422392 GRPP07492 148 aa13.33□□□□□ -0.27
CDH1-202ENST00000422392 SLC25A6P12236 298 aa13.33□□□□□ -0.27
CDH1-202ENST00000422392 FAM209BQ5JX69 171 aa13.33□□□□□ -0.27
CDH1-202ENST00000422392 ATP1A1-AS1Q5TC04 95 aa13.33□□□□□ -0.27
CDH1-202ENST00000422392 DPPA3Q6W0C5 159 aa13.33□□□□□ -0.27
CDH1-202ENST00000422392 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.33□□□□□ -0.27
CDH1-202ENST00000422392 ZNF610Q8N9Z0 462 aa13.33□□□□□ -0.27
CDH1-202ENST00000422392 BCL2L2Q92843 193 aaPredicted RBP13.33□□□□□ -0.27
CDH1-202ENST00000422392 LSM10Q969L4 123 aaKnown RBP13.33□□□□□ -0.27
CDH1-202ENST00000422392 ARRDC1-AS1Q9H2J1 176 aa13.33□□□□□ -0.27
CDH1-202ENST00000422392 GP6Q9HCN6 339 aa13.33□□□□□ -0.27
CDH1-202ENST00000422392 NXPH2O95156 264 aa13.33□□□□□ -0.28
CDH1-202ENST00000422392 CD55P08174 381 aa13.33□□□□□ -0.28
CDH1-202ENST00000422392 MDKP21741 143 aaPredicted RBP13.33□□□□□ -0.28
CDH1-202ENST00000422392 IDH3GP51553 393 aaPredicted RBP13.33□□□□□ -0.28
CDH1-202ENST00000422392 PYY3Q5JQD4 70 aa13.33□□□□□ -0.28
CDH1-202ENST00000422392 HEATR1Q9H583 2144 aaKnown RBP13.33□□□□□ -0.28
CDH1-202ENST00000422392 CEBPZOSA8MTT3 80 aa13.32□□□□□ -0.28
CDH1-202ENST00000422392 C4orf17Q53FE4 359 aa13.32□□□□□ -0.28
CDH1-202ENST00000422392 RNFT1Q5M7Z0 435 aa13.32□□□□□ -0.28
CDH1-202ENST00000422392 FGFRL1Q8N441 504 aa13.32□□□□□ -0.28
CDH1-202ENST00000422392 WDYHV1Q96HA8 205 aa13.32□□□□□ -0.28
CDH1-202ENST00000422392 ZPBPQ9BS86 351 aa13.32□□□□□ -0.28
CDH1-202ENST00000422392 TMEM9BQ9NQ34 198 aa13.32□□□□□ -0.28
CDH1-202ENST00000422392 ABI3Q9P2A4 366 aa13.32□□□□□ -0.28
CDH1-202ENST00000422392 SMG1Q96Q15 3661 aaKnown RBP13.32□□□□□ -0.28
CDH1-202ENST00000422392 TRAV1-1A0A0B4J248 108 aa13.32□□□□□ -0.28
CDH1-202ENST00000422392 IGHV2-70P01814 119 aa13.32□□□□□ -0.28
CDH1-202ENST00000422392 SP1P08047 785 aa13.32□□□□□ -0.28
CDH1-202ENST00000422392 MDH2P40926 338 aaKnown RBP13.32□□□□□ -0.28
CDH1-202ENST00000422392 CDX1P47902 265 aaPredicted RBP13.32□□□□□ -0.28
CDH1-202ENST00000422392 LRRC75BQ2VPJ9 315 aa13.32□□□□□ -0.28
CDH1-202ENST00000422392 FBXW9Q5XUX1 488 aa13.32□□□□□ -0.28
CDH1-202ENST00000422392 CA5BP1Q8WTZ4 195 aa13.32□□□□□ -0.28
CDH1-202ENST00000422392 RTL8AQ9BWD3 113 aa13.32□□□□□ -0.28
CDH1-202ENST00000422392 LIN7CQ9NUP9 197 aaKnown RBP13.32□□□□□ -0.28
CDH1-202ENST00000422392 CISD1Q9NZ45 108 aaKnown RBP13.32□□□□□ -0.28
CDH1-202ENST00000422392 BDP1A6H8Y1 2624 aa13.32□□□□□ -0.28
CDH1-202ENST00000422392 NPIPB11E5RHQ5 1161 aa13.31□□□□□ -0.28
CDH1-202ENST00000422392 PSPNO60542 156 aa13.31□□□□□ -0.28
CDH1-202ENST00000422392 KRASP01116 189 aa13.31□□□□□ -0.28
CDH1-202ENST00000422392 IGKV1D-33P01593 117 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms