RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 SERPINE3A8MV23 424 aa13.03□□□□□ -0.32
LINC00404-201ENST00000418660 BEAN1Q3B7T3 259 aa13.03□□□□□ -0.32
LINC00404-201ENST00000418660 C2orf76Q3KRA6 126 aa13.03□□□□□ -0.32
LINC00404-201ENST00000418660 MOB1BQ7L9L4 216 aa13.03□□□□□ -0.32
LINC00404-201ENST00000418660 ODF3L1Q8IXM7 274 aa13.03□□□□□ -0.32
LINC00404-201ENST00000418660 Q8N9W7 124 aa13.03□□□□□ -0.32
LINC00404-201ENST00000418660 FAM3DQ96BQ1 224 aa13.03□□□□□ -0.32
LINC00404-201ENST00000418660 PLSCR3Q9NRY6 295 aa13.03□□□□□ -0.32
LINC00404-201ENST00000418660 LIN7CQ9NUP9 197 aaKnown RBP13.03□□□□□ -0.32
LINC00404-201ENST00000418660 NDUFB11Q9NX14 153 aa13.03□□□□□ -0.32
LINC00404-201ENST00000418660 NOTCH1P46531 2555 aa13.03□□□□□ -0.32
LINC00404-201ENST00000418660 TRAV1-2A0A0B4J238 106 aa13.02□□□□□ -0.33
LINC00404-201ENST00000418660 PDCD5O14737 125 aa13.02□□□□□ -0.33
LINC00404-201ENST00000418660 DENRO43583 198 aaKnown RBP13.02□□□□□ -0.33
LINC00404-201ENST00000418660 TMEM50BP56557 158 aa13.02□□□□□ -0.33
LINC00404-201ENST00000418660 CLDN12P56749 244 aa13.02□□□□□ -0.33
LINC00404-201ENST00000418660 KPRPQ5T749 579 aaPredicted RBP13.02□□□□□ -0.33
LINC00404-201ENST00000418660 CD200R1LQ6Q8B3 271 aa13.02□□□□□ -0.33
LINC00404-201ENST00000418660 Q6ZPA2 131 aa13.02□□□□□ -0.33
LINC00404-201ENST00000418660 FOXRED2Q8IWF2 684 aa13.02□□□□□ -0.33
LINC00404-201ENST00000418660 SETD6Q8TBK2 473 aa13.02□□□□□ -0.33
LINC00404-201ENST00000418660 IL1F10Q8WWZ1 152 aa13.02□□□□□ -0.33
LINC00404-201ENST00000418660 NOL4LQ96MY1 436 aaPredicted RBP13.02□□□□□ -0.33
LINC00404-201ENST00000418660 S1PR3Q99500 378 aa13.02□□□□□ -0.33
LINC00404-201ENST00000418660 ABCG5Q9H222 651 aa13.02□□□□□ -0.33
LINC00404-201ENST00000418660 Q9H521 79 aa13.02□□□□□ -0.33
LINC00404-201ENST00000418660 STEAP1Q9UHE8 339 aa13.02□□□□□ -0.33
LINC00404-201ENST00000418660 AK3Q9UIJ7 227 aa13.02□□□□□ -0.33
LINC00404-201ENST00000418660 TRDV1A0A1B0GX56 115 aa13.01□□□□□ -0.33
LINC00404-201ENST00000418660 LDLRAD4O15165 306 aa13.01□□□□□ -0.33
LINC00404-201ENST00000418660 PF4V1P10720 104 aa13.01□□□□□ -0.33
LINC00404-201ENST00000418660 VEGFCP49767 419 aa13.01□□□□□ -0.33
LINC00404-201ENST00000418660 LSAMPQ13449 338 aa13.01□□□□□ -0.33
LINC00404-201ENST00000418660 HES5Q5TA89 166 aa13.01□□□□□ -0.33
LINC00404-201ENST00000418660 ZNF329Q86UD4 541 aa13.01□□□□□ -0.33
LINC00404-201ENST00000418660 WFDC9Q8NEX5 89 aa13.01□□□□□ -0.33
LINC00404-201ENST00000418660 OR2AK2Q8NG84 335 aa13.01□□□□□ -0.33
LINC00404-201ENST00000418660 OR56B1Q8NGI3 324 aa13.01□□□□□ -0.33
LINC00404-201ENST00000418660 RASL11BQ9BPW5 248 aa13.01□□□□□ -0.33
LINC00404-201ENST00000418660 MGAT4AQ9UM21 535 aa13.01□□□□□ -0.33
LINC00404-201ENST00000418660 LINC01548A6NM66 108 aa13□□□□□ -0.33
LINC00404-201ENST00000418660 AP4M1O00189 453 aa13□□□□□ -0.33
LINC00404-201ENST00000418660 GALP22466 123 aa13□□□□□ -0.33
LINC00404-201ENST00000418660 MYL9P24844 172 aa13□□□□□ -0.33
LINC00404-201ENST00000418660 GPR12P47775 334 aa13□□□□□ -0.33
LINC00404-201ENST00000418660 SLC35B1P78383 322 aa13□□□□□ -0.33
LINC00404-201ENST00000418660 KHDC1LQ5JSQ8 128 aa13□□□□□ -0.33
LINC00404-201ENST00000418660 UBE2UQ5VVX9 321 aa13□□□□□ -0.33
LINC00404-201ENST00000418660 ZNF833PQ6ZTB9 187 aa13□□□□□ -0.33
LINC00404-201ENST00000418660 SPARTQ8N0X7 666 aa13□□□□□ -0.33
LINC00404-201ENST00000418660 STPG2Q8N412 459 aa13□□□□□ -0.33
LINC00404-201ENST00000418660 COMMD1Q8N668 190 aa13□□□□□ -0.33
LINC00404-201ENST00000418660 ARHGAP5-AS1Q96IT6 56 aa13□□□□□ -0.33
LINC00404-201ENST00000418660 NABP2Q9BQ15 211 aa13□□□□□ -0.33
LINC00404-201ENST00000418660 HDHD3Q9BSH5 251 aaPredicted RBP13□□□□□ -0.33
LINC00404-201ENST00000418660 PECRQ9BY49 303 aa13□□□□□ -0.33
LINC00404-201ENST00000418660 YTHDF1Q9BYJ9 559 aaKnown RBP13□□□□□ -0.33
LINC00404-201ENST00000418660 C12orf4Q9NQ89 552 aa13□□□□□ -0.33
LINC00404-201ENST00000418660 LINC00527Q9UJ94 153 aa13□□□□□ -0.33
LINC00404-201ENST00000418660 RAB22AQ9UL26 194 aa13□□□□□ -0.33
LINC00404-201ENST00000418660 TMEM272A0A1B0GTI8 110 aa12.99□□□□□ -0.33
LINC00404-201ENST00000418660 SHISA3A0PJX4 238 aa12.99□□□□□ -0.33
LINC00404-201ENST00000418660 PF4P02776 101 aa12.99□□□□□ -0.33
LINC00404-201ENST00000418660 OR3A3P47888 321 aa12.99□□□□□ -0.33
LINC00404-201ENST00000418660 F2RL1P55085 397 aa12.99□□□□□ -0.33
LINC00404-201ENST00000418660 OXLD1Q5BKU9 147 aa12.99□□□□□ -0.33
LINC00404-201ENST00000418660 FAM71E2Q8N5Q1 922 aa12.99□□□□□ -0.33
LINC00404-201ENST00000418660 CMSS1Q9BQ75 279 aaKnown RBP12.99□□□□□ -0.33
LINC00404-201ENST00000418660 GON7Q9BXV9 100 aa12.99□□□□□ -0.33
LINC00404-201ENST00000418660 MRPL20Q9BYC9 149 aaKnown RBP12.99□□□□□ -0.33
LINC00404-201ENST00000418660 IFI27L2Q9H2X8 130 aa12.99□□□□□ -0.33
LINC00404-201ENST00000418660 Q9N2K0 584 aa12.99□□□□□ -0.33
LINC00404-201ENST00000418660 ZFP57Q9NU63 452 aa12.99□□□□□ -0.33
LINC00404-201ENST00000418660 PIPOXQ9P0Z9 390 aa12.99□□□□□ -0.33
LINC00404-201ENST00000418660 SAA2-SAA4A0A096LPE2 208 aa12.98□□□□□ -0.33
LINC00404-201ENST00000418660 IFITM5A6NNB3 132 aa12.98□□□□□ -0.33
LINC00404-201ENST00000418660 ITGB1BP1O14713 200 aa12.98□□□□□ -0.33
LINC00404-201ENST00000418660 ST8SIA5O15466 376 aa12.98□□□□□ -0.33
LINC00404-201ENST00000418660 SAA2P0DJI9 122 aaPredicted RBP12.98□□□□□ -0.33
LINC00404-201ENST00000418660 CD33P20138 364 aa12.98□□□□□ -0.33
LINC00404-201ENST00000418660 RAB3BP20337 219 aa12.98□□□□□ -0.33
LINC00404-201ENST00000418660 OR10A3P58181 314 aa12.98□□□□□ -0.33
LINC00404-201ENST00000418660 HLA-DRB3P79483 266 aa12.98□□□□□ -0.33
LINC00404-201ENST00000418660 PLA2G7Q13093 441 aa12.98□□□□□ -0.33
LINC00404-201ENST00000418660 PLAC9Q5JTB6 97 aa12.98□□□□□ -0.33
LINC00404-201ENST00000418660 FAM71F2Q6NXP2 309 aa12.98□□□□□ -0.33
LINC00404-201ENST00000418660 FCGR1BQ92637 280 aa12.98□□□□□ -0.33
LINC00404-201ENST00000418660 RBMXL1Q96E39 390 aaKnown RBP12.98□□□□□ -0.33
LINC00404-201ENST00000418660 GHITMQ9H3K2 345 aa12.98□□□□□ -0.33
LINC00404-201ENST00000418660 SLC23A1Q9UHI7 598 aa12.98□□□□□ -0.33
LINC00404-201ENST00000418660 PLXNB1O43157 2135 aa12.98□□□□□ -0.33
LINC00404-201ENST00000418660 RAB29O14966 203 aa12.97□□□□□ -0.33
LINC00404-201ENST00000418660 ZBTB25P24278 435 aa12.97□□□□□ -0.33
LINC00404-201ENST00000418660 SOX6P35712 828 aa12.97□□□□□ -0.33
LINC00404-201ENST00000418660 CEACAM6P40199 344 aa12.97□□□□□ -0.33
LINC00404-201ENST00000418660 RPL23AP62750 156 aaKnown RBP12.97□□□□□ -0.33
LINC00404-201ENST00000418660 PNLIPRP3Q17RR3 467 aa12.97□□□□□ -0.33
LINC00404-201ENST00000418660 C22orf42Q6IC83 251 aa12.97□□□□□ -0.33
LINC00404-201ENST00000418660 RAB3CQ96E17 227 aa12.97□□□□□ -0.33
LINC00404-201ENST00000418660 ZNF251Q9BRH9 671 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms