RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 LUMP51884 338 aaPredicted RBP6.92□□□□□ -1.3
TRIM48-201ENST00000417545 FXYD4P59646 89 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 BPIFB3P59826 476 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 ZNF79Q15937 498 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 Q3ZCU0 254 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 SCGB2B2Q4G0G5 96 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 MORN2Q502X0 79 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 RUSC1-AS1Q66K80 236 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 RBMS3Q6XE24 437 aaKnown RBP6.92□□□□□ -1.3
TRIM48-201ENST00000417545 BRD3OSQ6XYD6 125 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 Q6ZPA2 131 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 C5orf24Q7Z6I8 188 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 LYG1Q8N1E2 194 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 OR6F1Q8NGZ6 308 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 TNFRSF14Q92956 283 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 SNAPC3Q92966 411 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 TOMM40LQ969M1 308 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 RPEQ96AT9 228 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 YPEL2Q96QA6 119 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 CCDC32Q9BV29 185 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 MMP28Q9H239 520 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 GSX1Q9H4S2 264 aaPredicted RBP6.92□□□□□ -1.3
TRIM48-201ENST00000417545 UNKLQ9H9P5 680 aaKnown RBP6.92□□□□□ -1.3
TRIM48-201ENST00000417545 AKIP1Q9NQ31 210 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 ABCB10Q9NRK6 738 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 PSG11Q9UQ72 335 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.91□□□□□ -1.3
TRIM48-201ENST00000417545 ITPR3Q14573 2671 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 WNK2Q9Y3S1 2297 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 NOTCH2Q04721 2471 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 TRBV6-7A0A0A0MS04 114 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 CENPVL3A0A0U1RRI6 287 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 LEUTXA8MZ59 168 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 FBP1P09467 338 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 OR8U9P0C7N5 309 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 IGHV4-38-2P0DP08 117 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 IL7P13232 177 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 PGAM2P15259 253 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 NAT1P18440 290 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 CD40LGP29965 261 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 SAA4P35542 130 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 RFX2P48378 723 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 PPP5CP53041 499 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 KRTAP1-1Q07627 177 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 HLA-DRB5Q30154 266 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 MIDNQ504T8 468 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 ZNF626Q68DY1 528 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 C16orf87Q6PH81 154 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 BEND2Q8NDZ0 799 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 OR8U1Q8NH10 309 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 SECTM1Q8WVN6 248 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 BORCS5Q969J3 196 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 S1PR3Q99500 378 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 SOSTQ9BQB4 213 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 ZNF2Q9BSG1 426 aaPredicted RBP6.91□□□□□ -1.3
TRIM48-201ENST00000417545 OR2D2Q9H210 308 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 LINC00574Q9H8X3 128 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 TMEM160Q9NX00 188 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 ZNF107Q9UII5 783 aaPredicted RBP6.91□□□□□ -1.3
TRIM48-201ENST00000417545 SCP2D1Q9UJQ7 156 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 ANAPC10Q9UM13 185 aa6.91□□□□□ -1.3
TRIM48-201ENST00000417545 TBL2Q9Y4P3 447 aaKnown RBP6.91□□□□□ -1.3
TRIM48-201ENST00000417545 VPS13CQ709C8 3753 aa6.9□□□□□ -1.3
TRIM48-201ENST00000417545 A0A087X0M5 115 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 IGKV1-6A0A0C4DH72 117 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 LOC100996750A0A140TA64 210 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 A0A1B0GX30 115 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 ANKRD20A5PA0PJZ0 165 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 BTBD17A6NE02 478 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 INAFM1C9JVW0 142 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 RAB29O14966 203 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 SLC22A5O76082 557 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 AVPP01185 164 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 PPYP01298 95 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 AADACP22760 399 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 CD34P28906 385 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 LOXL3P58215 753 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 DEFA1P59665 94 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 DEFA3P59666 94 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 CBX3Q13185 183 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 DYRK1AQ13627 763 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 HERPUD1Q15011 391 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 ABCA11PQ4W5N1 156 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 PLA1AQ53H76 456 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 MINOS1Q5TGZ0 78 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 CCDC144NLQ6NUI1 221 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 H1FOOQ8IZA3 346 aaPredicted RBP6.9□□□□□ -1.31
TRIM48-201ENST00000417545 MFSD4AQ8N468 514 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 ARRDC1Q8N5I2 433 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 C11orf42Q8N5U0 333 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 OR11H6Q8NGC7 330 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 C22orf15Q8WYQ4 148 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 PRRT1Q99946 306 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 KRTAP4-6Q9BYQ5 205 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 TINAGL1Q9GZM7 467 aaPredicted RBP6.9□□□□□ -1.31
TRIM48-201ENST00000417545 SLC5A7Q9GZV3 580 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 GHITMQ9H3K2 345 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 PIPOXQ9P0Z9 390 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 DPM3Q9P2X0 92 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 RNF150Q9ULK6 438 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms