RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 SOX21Q9Y651 276 aaPredicted RBP0.82□□□□□ -2.28
PMS1-203ENST00000409593 BZW2Q9Y6E2 419 aaKnown RBP0.82□□□□□ -2.28
PMS1-203ENST00000409593 FREM1Q5H8C1 2179 aa0.82□□□□□ -2.28
PMS1-203ENST00000409593 DIDO1Q9BTC0 2240 aaKnown RBP0.82□□□□□ -2.28
PMS1-203ENST00000409593 TENM3Q9P273 2699 aa0.82□□□□□ -2.28
PMS1-203ENST00000409593 POLR3GO15318 223 aaPredicted RBP0.81□□□□□ -2.28
PMS1-203ENST00000409593 ATF1P18846 271 aa0.81□□□□□ -2.28
PMS1-203ENST00000409593 RPL14P50914 215 aaKnown RBP0.81□□□□□ -2.28
PMS1-203ENST00000409593 UBE2KP61086 200 aa0.81□□□□□ -2.28
PMS1-203ENST00000409593 ZNF90Q03938 601 aa0.81□□□□□ -2.28
PMS1-203ENST00000409593 LRRC28Q86X40 367 aaPredicted RBP0.81□□□□□ -2.28
PMS1-203ENST00000409593 ACBD4Q8NC06 268 aa0.81□□□□□ -2.28
PMS1-203ENST00000409593 IFT81Q8WYA0 676 aa0.81□□□□□ -2.28
PMS1-203ENST00000409593 CATSPER2Q96P56 530 aa0.81□□□□□ -2.28
PMS1-203ENST00000409593 TBX5Q99593 518 aa0.81□□□□□ -2.28
PMS1-203ENST00000409593 MED18Q9BUE0 208 aa0.81□□□□□ -2.28
PMS1-203ENST00000409593 GTSF1LQ9H1H1 148 aa0.81□□□□□ -2.28
PMS1-203ENST00000409593 PLCH2O75038 1416 aa0.81□□□□□ -2.28
PMS1-203ENST00000409593 TMEM235A6NFC5 223 aa0.81□□□□□ -2.28
PMS1-203ENST00000409593 ZMPSTE24O75844 475 aa0.81□□□□□ -2.28
PMS1-203ENST00000409593 UGT2B10P36537 528 aa0.81□□□□□ -2.28
PMS1-203ENST00000409593 RELAQ04206 551 aa0.81□□□□□ -2.28
PMS1-203ENST00000409593 CENPWQ5EE01 88 aa0.81□□□□□ -2.28
PMS1-203ENST00000409593 MITD1Q8WV92 249 aa0.81□□□□□ -2.28
PMS1-203ENST00000409593 MRAP2Q96G30 205 aa0.81□□□□□ -2.28
PMS1-203ENST00000409593 BCL7BQ9BQE9 202 aa0.81□□□□□ -2.28
PMS1-203ENST00000409593 C11orf1Q9H5F2 150 aa0.81□□□□□ -2.28
PMS1-203ENST00000409593 SNX12Q9UMY4 172 aa0.81□□□□□ -2.28
PMS1-203ENST00000409593 GRIFINA4D1Z8 144 aa0.8□□□□□ -2.28
PMS1-203ENST00000409593 RFPL4AA6NLU0 287 aa0.8□□□□□ -2.28
PMS1-203ENST00000409593 C2orf74A8MZ97 194 aa0.8□□□□□ -2.28
PMS1-203ENST00000409593 RFPL4AL1F8VTS6 287 aa0.8□□□□□ -2.28
PMS1-203ENST00000409593 SLC38A11Q08AI6 406 aa0.8□□□□□ -2.28
PMS1-203ENST00000409593 VAMP3Q15836 100 aa0.8□□□□□ -2.28
PMS1-203ENST00000409593 HINT2Q9BX68 163 aa0.8□□□□□ -2.28
PMS1-203ENST00000409593 METTL8Q9H825 291 aaKnown RBP0.8□□□□□ -2.28
PMS1-203ENST00000409593 CLEC2DQ9UHP7 191 aa0.8□□□□□ -2.28
PMS1-203ENST00000409593 MYO5BQ9ULV0 1848 aa0.8□□□□□ -2.28
PMS1-203ENST00000409593 CYTH3O43739 400 aa0.79□□□□□ -2.28
PMS1-203ENST00000409593 OTCP00480 354 aa0.79□□□□□ -2.28
PMS1-203ENST00000409593 ORM2P19652 201 aa0.79□□□□□ -2.28
PMS1-203ENST00000409593 CRHBPP24387 322 aa0.79□□□□□ -2.28
PMS1-203ENST00000409593 RCVRNP35243 200 aa0.79□□□□□ -2.28
PMS1-203ENST00000409593 ACTBP60709 375 aa0.79□□□□□ -2.28
PMS1-203ENST00000409593 ACTG1P63261 375 aa0.79□□□□□ -2.28
PMS1-203ENST00000409593 HSP90B2PQ58FF3 399 aa0.79□□□□□ -2.28
PMS1-203ENST00000409593 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.79□□□□□ -2.28
PMS1-203ENST00000409593 RNF133Q8WVZ7 376 aa0.79□□□□□ -2.28
PMS1-203ENST00000409593 CYSTM1Q9H1C7 97 aa0.79□□□□□ -2.28
PMS1-203ENST00000409593 ABCB11O95342 1321 aa0.79□□□□□ -2.28
PMS1-203ENST00000409593 ZNF469Q96JG9 3925 aaPredicted RBP0.79□□□□□ -2.28
PMS1-203ENST00000409593 FBN2P35556 2912 aa0.79□□□□□ -2.28
PMS1-203ENST00000409593 SCN9AQ15858 1988 aa0.79□□□□□ -2.28
PMS1-203ENST00000409593 IGKV2-40A0A087WW87 121 aaPredicted RBP0.78□□□□□ -2.28
PMS1-203ENST00000409593 TRAV41A0A0B4J266 112 aa0.78□□□□□ -2.28
PMS1-203ENST00000409593 ZW10O43264 779 aa0.78□□□□□ -2.28
PMS1-203ENST00000409593 IGKV2D-40P01614 121 aaPredicted RBP0.78□□□□□ -2.28
PMS1-203ENST00000409593 GADD45AP24522 165 aa0.78□□□□□ -2.28
PMS1-203ENST00000409593 PSG3Q16557 428 aa0.78□□□□□ -2.28
PMS1-203ENST00000409593 TRMT12Q53H54 448 aaKnown RBP0.78□□□□□ -2.28
PMS1-203ENST00000409593 OR8B12Q8NGG6 310 aa0.78□□□□□ -2.28
PMS1-203ENST00000409593 FNDC9Q8TBE3 224 aa0.78□□□□□ -2.28
PMS1-203ENST00000409593 GOLPH3Q9H4A6 298 aa0.78□□□□□ -2.28
PMS1-203ENST00000409593 TMEM216Q9P0N5 145 aa0.78□□□□□ -2.28
PMS1-203ENST00000409593 DNAJC12Q9UKB3 198 aa0.78□□□□□ -2.28
PMS1-203ENST00000409593 ANGPT4Q9Y264 503 aa0.78□□□□□ -2.28
PMS1-203ENST00000409593 NUMA1Q14980 2115 aa0.78□□□□□ -2.28
PMS1-203ENST00000409593 TMSB15BA0A087X1C1 80 aa0.78□□□□□ -2.29
PMS1-203ENST00000409593 LINC00862A6NCI5 91 aa0.78□□□□□ -2.29
PMS1-203ENST00000409593 ZNF705FA8MVS1 300 aaPredicted RBP0.78□□□□□ -2.29
PMS1-203ENST00000409593 PSMB3P49720 205 aa0.78□□□□□ -2.29
PMS1-203ENST00000409593 BSXQ3C1V8 233 aa0.78□□□□□ -2.29
PMS1-203ENST00000409593 AHSA2Q719I0 299 aa0.78□□□□□ -2.29
PMS1-203ENST00000409593 MICAL3Q7RTP6 2002 aa0.78□□□□□ -2.29
PMS1-203ENST00000409593 ADAMTSL1Q8N6G6 1762 aa0.78□□□□□ -2.29
PMS1-203ENST00000409593 MIEN1Q9BRT3 115 aa0.78□□□□□ -2.29
PMS1-203ENST00000409593 KDM5BQ9UGL1 1544 aa0.78□□□□□ -2.29
PMS1-203ENST00000409593 SLX4Q8IY92 1834 aa0.77□□□□□ -2.29
PMS1-203ENST00000409593 TNIKQ9UKE5 1360 aa0.77□□□□□ -2.29
PMS1-203ENST00000409593 ZNF532Q9HCE3 1301 aa0.77□□□□□ -2.29
PMS1-203ENST00000409593 MDFIC2A0A1B0GVS7 189 aa0.77□□□□□ -2.29
PMS1-203ENST00000409593 RAB19A4D1S5 217 aa0.77□□□□□ -2.29
PMS1-203ENST00000409593 CSTAP01040 98 aa0.77□□□□□ -2.29
PMS1-203ENST00000409593 ATP6V0CP27449 155 aa0.77□□□□□ -2.29
PMS1-203ENST00000409593 SERPINB10P48595 397 aa0.77□□□□□ -2.29
PMS1-203ENST00000409593 PABPC1L2AQ5JQF8 200 aa0.77□□□□□ -2.29
PMS1-203ENST00000409593 OR4P4Q8NGL7 312 aa0.77□□□□□ -2.29
PMS1-203ENST00000409593 OR5J2Q8NH18 312 aa0.77□□□□□ -2.29
PMS1-203ENST00000409593 OR5K1Q8NHB7 308 aa0.77□□□□□ -2.29
PMS1-203ENST00000409593 TRNT1Q96Q11 434 aaKnown RBP0.77□□□□□ -2.29
PMS1-203ENST00000409593 NXT1Q9UKK6 140 aaKnown RBP0.77□□□□□ -2.29
PMS1-203ENST00000409593 RBMX2Q9Y388 322 aaKnown RBP0.77□□□□□ -2.29
PMS1-203ENST00000409593 ZFHX2Q9C0A1 2572 aaPredicted RBP0.77□□□□□ -2.29
PMS1-203ENST00000409593 MYO15BQ96JP2 1530 aa0.76□□□□□ -2.29
PMS1-203ENST00000409593 INTS1Q8N201 2190 aaKnown RBP0.76□□□□□ -2.29
PMS1-203ENST00000409593 IGKV3D-7A0A0C4DH55 119 aa0.76□□□□□ -2.29
PMS1-203ENST00000409593 IGKV3OR2-268A0A0C4DH90 116 aa0.76□□□□□ -2.29
PMS1-203ENST00000409593 A0A1B0GW15 77 aa0.76□□□□□ -2.29
PMS1-203ENST00000409593 CCNOP22674 350 aa0.76□□□□□ -2.29
PMS1-203ENST00000409593 MTERF4Q7Z6M4 381 aaKnown RBP0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms