RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 AKIP1Q9NQ31 210 aa6.09□□□□□ -1.43
USP16-204ENST00000399976 NECAP2Q9NVZ3 263 aa6.09□□□□□ -1.43
USP16-204ENST00000399976 MTFP1Q9UDX5 166 aa6.09□□□□□ -1.43
USP16-204ENST00000399976 VPREB3Q9UKI3 123 aa6.09□□□□□ -1.43
USP16-204ENST00000399976 OR5H14A6NHG9 310 aa6.09□□□□□ -1.44
USP16-204ENST00000399976 RAB29O14966 203 aa6.09□□□□□ -1.44
USP16-204ENST00000399976 FGF16O43320 207 aa6.09□□□□□ -1.44
USP16-204ENST00000399976 SPDEFO95238 335 aa6.09□□□□□ -1.44
USP16-204ENST00000399976 ARG1P05089 322 aa6.09□□□□□ -1.44
USP16-204ENST00000399976 ARFRP1Q13795 201 aa6.09□□□□□ -1.44
USP16-204ENST00000399976 OVCH2Q7RTZ1 564 aa6.09□□□□□ -1.44
USP16-204ENST00000399976 ARRDC1Q8N5I2 433 aa6.09□□□□□ -1.44
USP16-204ENST00000399976 OR5AP2Q8NGF4 316 aa6.09□□□□□ -1.44
USP16-204ENST00000399976 MCFD2Q8NI22 146 aa6.09□□□□□ -1.44
USP16-204ENST00000399976 ZNF486Q96H40 463 aaPredicted RBP6.09□□□□□ -1.44
USP16-204ENST00000399976 CHMP1AQ9HD42 196 aaPredicted RBP6.09□□□□□ -1.44
USP16-204ENST00000399976 SLC2A8Q9NY64 477 aa6.09□□□□□ -1.44
USP16-204ENST00000399976 ABCA1O95477 2261 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 TRAV18A0A075B6X5 111 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 A0A0B4J203 849 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 A0A1W2PPI3 338 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 A6NDX4 124 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 HPGDSO60760 199 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 MC5RP33032 325 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 SSTR5P35346 364 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 LSM3P62310 102 aaKnown RBP6.08□□□□□ -1.44
USP16-204ENST00000399976 UBA52P62987 128 aaKnown RBP6.08□□□□□ -1.44
USP16-204ENST00000399976 HERPUD1Q15011 391 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 CDK10Q15131 360 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 SURF2Q15527 256 aaPredicted RBP6.08□□□□□ -1.44
USP16-204ENST00000399976 DHRS7BQ6IAN0 325 aaPredicted RBP6.08□□□□□ -1.44
USP16-204ENST00000399976 LPCAT3Q6P1A2 487 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 RBMS3Q6XE24 437 aaKnown RBP6.08□□□□□ -1.44
USP16-204ENST00000399976 ODF3L1Q8IXM7 274 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 BATF2Q8N1L9 274 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 Q8N6K4 173 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 ZDHHC22Q8N966 263 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 ZNF48Q96MX3 618 aaPredicted RBP6.08□□□□□ -1.44
USP16-204ENST00000399976 IFI27L2Q9H2X8 130 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 PSG11Q9UQ72 335 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 ZNF469Q96JG9 3925 aaPredicted RBP6.08□□□□□ -1.44
USP16-204ENST00000399976 PIGBOS1A0A0B4J2F0 54 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 TMEM89A2RUT3 159 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 BTBD17A6NE02 478 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 ST8SIA5O15466 376 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 MMP23AO75900 390 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 CSF1P09603 554 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 RCC1P18754 421 aaPredicted RBP6.08□□□□□ -1.44
USP16-204ENST00000399976 KIR2DS2P43631 304 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 ZNF45Q02386 682 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 EIF4EBP1Q13541 118 aaPredicted RBP6.08□□□□□ -1.44
USP16-204ENST00000399976 DYRK1AQ13627 763 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 MEF2DQ14814 521 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 ZNF660Q6AZW8 331 aaPredicted RBP6.08□□□□□ -1.44
USP16-204ENST00000399976 OR6Q1Q8NGQ2 317 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 OR4K15Q8NH41 348 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 OR1L1Q8NH94 360 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 OR10J5Q8NHC4 309 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 RTN4IP1Q8WWV3 396 aaPredicted RBP6.08□□□□□ -1.44
USP16-204ENST00000399976 NKX3-1Q99801 234 aaPredicted RBP6.08□□□□□ -1.44
USP16-204ENST00000399976 C7orf50Q9BRJ6 194 aaKnown RBP6.08□□□□□ -1.44
USP16-204ENST00000399976 TCF19Q9Y242 345 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 OR2W1Q9Y3N9 320 aa6.08□□□□□ -1.44
USP16-204ENST00000399976 ANK3Q12955 4377 aaKnown RBP6.08□□□□□ -1.44
USP16-204ENST00000399976 CCDC168Q8NDH2 2452 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 IGKV1-6A0A0C4DH72 117 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 TMEM235A6NFC5 223 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 BOLA2-SMG1P6H3BVE0 249 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 RBFOX2O43251 390 aaKnown RBP eCLIP6.07□□□□□ -1.44
USP16-204ENST00000399976 TSPAN9O75954 239 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 S100A5P33763 92 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 NDUFA5Q16718 116 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 DEFB112Q30KQ8 113 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 CT45A1Q5HYN5 189 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 ZNF66Q6ZN08 573 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 GDPD1Q8N9F7 314 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 BEST4Q8NFU0 473 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 OR2AK2Q8NG84 335 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 CT45A3Q8NHU0 189 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 S1PR3Q99500 378 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 SLC6A7Q99884 636 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 ZNF251Q9BRH9 671 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 SIRT7Q9NRC8 400 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 COMMD3Q9UBI1 195 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 EXTL2Q9UBQ6 330 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 F8P00451 2351 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 hCG_2014768A0A024R1R8 64 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 A0A0U1RQK1 487 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 OR2F2O95006 317 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 GSTT2BP0CG30 244 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 RAB13P51153 203 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 CRIP2P52943 208 aaPredicted RBP6.07□□□□□ -1.44
USP16-204ENST00000399976 RND3P61587 244 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 ZNF645Q8N7E2 425 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 TPRX1Q8N7U7 411 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 OR5AN1Q8NGI8 311 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 PIFOQ8TCI5 191 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 OR2S2Q9NQN1 319 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 GNG12Q9UBI6 72 aa6.07□□□□□ -1.44
USP16-204ENST00000399976 FAM96BQ9Y3D0 163 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms