RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 C12orf4Q9NQ89 552 aa11.08□□□□□ -0.64
SEC13-204ENST00000397099 PIPOXQ9P0Z9 390 aa11.08□□□□□ -0.64
SEC13-204ENST00000397099 TGP01266 2768 aa11.07□□□□□ -0.64
SEC13-204ENST00000397099 NCBP2LA6PVI3 153 aaKnown RBP11.07□□□□□ -0.64
SEC13-204ENST00000397099 IGHG2P01859 326 aa11.07□□□□□ -0.64
SEC13-204ENST00000397099 RAB6AP20340 208 aa11.07□□□□□ -0.64
SEC13-204ENST00000397099 ZBTB25P24278 435 aa11.07□□□□□ -0.64
SEC13-204ENST00000397099 REG1BP48304 166 aa11.07□□□□□ -0.64
SEC13-204ENST00000397099 ZNF134P52741 427 aa11.07□□□□□ -0.64
SEC13-204ENST00000397099 SSX1Q16384 188 aa11.07□□□□□ -0.64
SEC13-204ENST00000397099 SLC35E3Q7Z769 313 aa11.07□□□□□ -0.64
SEC13-204ENST00000397099 SPARTQ8N0X7 666 aa11.07□□□□□ -0.64
SEC13-204ENST00000397099 UBALD1Q8TB05 177 aa11.07□□□□□ -0.64
SEC13-204ENST00000397099 PTX4Q96A99 478 aa11.07□□□□□ -0.64
SEC13-204ENST00000397099 R3HDM4Q96D70 268 aa11.07□□□□□ -0.64
SEC13-204ENST00000397099 GFI1Q99684 422 aa11.07□□□□□ -0.64
SEC13-204ENST00000397099 RASL11BQ9BPW5 248 aa11.07□□□□□ -0.64
SEC13-204ENST00000397099 CHCHD6Q9BRQ6 235 aa11.07□□□□□ -0.64
SEC13-204ENST00000397099 NICN1Q9BSH3 213 aa11.07□□□□□ -0.64
SEC13-204ENST00000397099 PLXNB1O43157 2135 aa11.06□□□□□ -0.64
SEC13-204ENST00000397099 TCRBV4S1A1TA0A5B7 111 aa11.06□□□□□ -0.64
SEC13-204ENST00000397099 PSMB11A5LHX3 300 aa11.06□□□□□ -0.64
SEC13-204ENST00000397099 METTL21EPA6NDL7 271 aa11.06□□□□□ -0.64
SEC13-204ENST00000397099 IFITM5A6NNB3 132 aa11.06□□□□□ -0.64
SEC13-204ENST00000397099 SERPINE3A8MV23 424 aa11.06□□□□□ -0.64
SEC13-204ENST00000397099 AP4M1O00189 453 aa11.06□□□□□ -0.64
SEC13-204ENST00000397099 RAB29O14966 203 aa11.06□□□□□ -0.64
SEC13-204ENST00000397099 RRP9O43818 475 aaKnown RBP11.06□□□□□ -0.64
SEC13-204ENST00000397099 DIRAS3O95661 229 aa11.06□□□□□ -0.64
SEC13-204ENST00000397099 RAB3BP20337 219 aa11.06□□□□□ -0.64
SEC13-204ENST00000397099 GADD45AP24522 165 aa11.06□□□□□ -0.64
SEC13-204ENST00000397099 FGF9P31371 208 aaPredicted RBP11.06□□□□□ -0.64
SEC13-204ENST00000397099 VEGFCP49767 419 aa11.06□□□□□ -0.64
SEC13-204ENST00000397099 HNF4GQ14541 408 aa11.06□□□□□ -0.64
SEC13-204ENST00000397099 TMEM95Q3KNT9 176 aa11.06□□□□□ -0.64
SEC13-204ENST00000397099 TPRA1Q86W33 373 aa11.06□□□□□ -0.64
SEC13-204ENST00000397099 IL1F10Q8WWZ1 152 aa11.06□□□□□ -0.64
SEC13-204ENST00000397099 S1PR3Q99500 378 aa11.06□□□□□ -0.64
SEC13-204ENST00000397099 ABCG5Q9H222 651 aa11.06□□□□□ -0.64
SEC13-204ENST00000397099 ZFP57Q9NU63 452 aa11.06□□□□□ -0.64
SEC13-204ENST00000397099 ZNF580Q9UK33 172 aa11.06□□□□□ -0.64
SEC13-204ENST00000397099 A0A0A6YYD4 124 aa11.05□□□□□ -0.64
SEC13-204ENST00000397099 FOXI3A8MTJ6 420 aaPredicted RBP11.05□□□□□ -0.64
SEC13-204ENST00000397099 G3V4G9 280 aa11.05□□□□□ -0.64
SEC13-204ENST00000397099 LDLRAD4O15165 306 aa11.05□□□□□ -0.64
SEC13-204ENST00000397099 SLC31A2O15432 143 aa11.05□□□□□ -0.64
SEC13-204ENST00000397099 SOCS1O15524 211 aa11.05□□□□□ -0.64
SEC13-204ENST00000397099 SCGNO76038 276 aa11.05□□□□□ -0.64
SEC13-204ENST00000397099 PF4V1P10720 104 aa11.05□□□□□ -0.64
SEC13-204ENST00000397099 PPP1CCP36873 323 aaKnown RBP11.05□□□□□ -0.64
SEC13-204ENST00000397099 SERPINB10P48595 397 aa11.05□□□□□ -0.64
SEC13-204ENST00000397099 LSAMPQ13449 338 aa11.05□□□□□ -0.64
SEC13-204ENST00000397099 ZNF773Q6PK81 442 aa11.05□□□□□ -0.64
SEC13-204ENST00000397099 ZNF833PQ6ZTB9 187 aa11.05□□□□□ -0.64
SEC13-204ENST00000397099 OR52L2PQ8NGH6 319 aa11.05□□□□□ -0.64
SEC13-204ENST00000397099 SETD6Q8TBK2 473 aa11.05□□□□□ -0.64
SEC13-204ENST00000397099 CMSS1Q9BQ75 279 aaKnown RBP11.05□□□□□ -0.64
SEC13-204ENST00000397099 PECRQ9BY49 303 aa11.05□□□□□ -0.64
SEC13-204ENST00000397099 SLC23A1Q9UHI7 598 aa11.05□□□□□ -0.64
SEC13-204ENST00000397099 AK3Q9UIJ7 227 aa11.05□□□□□ -0.64
SEC13-204ENST00000397099 STUB1Q9UNE7 303 aa11.05□□□□□ -0.64
SEC13-204ENST00000397099 SSR3Q9UNL2 185 aa11.05□□□□□ -0.64
SEC13-204ENST00000397099 IGHV3-72A0A0B4J1Y9 119 aa11.04□□□□□ -0.64
SEC13-204ENST00000397099 TMEM272A0A1B0GTI8 110 aa11.04□□□□□ -0.64
SEC13-204ENST00000397099 HSPA12AO43301 675 aa11.04□□□□□ -0.64
SEC13-204ENST00000397099 CD3GP09693 182 aa11.04□□□□□ -0.64
SEC13-204ENST00000397099 OR5H8P0DN80 308 aa11.04□□□□□ -0.64
SEC13-204ENST00000397099 PSMB9P28065 219 aa11.04□□□□□ -0.64
SEC13-204ENST00000397099 MC5RP33032 325 aa11.04□□□□□ -0.64
SEC13-204ENST00000397099 TMEM50BP56557 158 aa11.04□□□□□ -0.64
SEC13-204ENST00000397099 HLA-DRB3P79483 266 aa11.04□□□□□ -0.64
SEC13-204ENST00000397099 GNMTQ14749 295 aa11.04□□□□□ -0.64
SEC13-204ENST00000397099 KIR2DS1Q14954 304 aa11.04□□□□□ -0.64
SEC13-204ENST00000397099 FBLN7Q53RD9 439 aa11.04□□□□□ -0.64
SEC13-204ENST00000397099 REC114Q7Z4M0 266 aa11.04□□□□□ -0.64
SEC13-204ENST00000397099 Q8N9W7 124 aa11.04□□□□□ -0.64
SEC13-204ENST00000397099 PHF21AQ96BD5 680 aa11.04□□□□□ -0.64
SEC13-204ENST00000397099 RAB3CQ96E17 227 aa11.04□□□□□ -0.64
SEC13-204ENST00000397099 ARHGAP5-AS1Q96IT6 56 aa11.04□□□□□ -0.64
SEC13-204ENST00000397099 Q9N2K0 584 aa11.04□□□□□ -0.64
SEC13-204ENST00000397099 NOTOA8MTQ0 251 aa11.03□□□□□ -0.64
SEC13-204ENST00000397099 ADARB2-AS1A8MUL3 147 aa11.03□□□□□ -0.64
SEC13-204ENST00000397099 TMEM127O75204 238 aa11.03□□□□□ -0.64
SEC13-204ENST00000397099 DUS4LO95620 317 aaKnown RBP11.03□□□□□ -0.64
SEC13-204ENST00000397099 SOX6P35712 828 aa11.03□□□□□ -0.64
SEC13-204ENST00000397099 GPR12P47775 334 aa11.03□□□□□ -0.64
SEC13-204ENST00000397099 CLDN12P56749 244 aa11.03□□□□□ -0.64
SEC13-204ENST00000397099 SCAND1P57086 179 aa11.03□□□□□ -0.64
SEC13-204ENST00000397099 SRSF7Q16629 238 aaKnown RBP eCLIP11.03□□□□□ -0.64
SEC13-204ENST00000397099 KCTD21Q4G0X4 260 aa11.03□□□□□ -0.64
SEC13-204ENST00000397099 HES5Q5TA89 166 aa11.03□□□□□ -0.64
SEC13-204ENST00000397099 C22orf42Q6IC83 251 aa11.03□□□□□ -0.64
SEC13-204ENST00000397099 TEX38Q6PEX7 206 aa11.03□□□□□ -0.64
SEC13-204ENST00000397099 ODF3L1Q8IXM7 274 aa11.03□□□□□ -0.64
SEC13-204ENST00000397099 STPG2Q8N412 459 aa11.03□□□□□ -0.64
SEC13-204ENST00000397099 FAM71E2Q8N5Q1 922 aa11.03□□□□□ -0.64
SEC13-204ENST00000397099 WFDC9Q8NEX5 89 aa11.03□□□□□ -0.64
SEC13-204ENST00000397099 OR4A4PQ8NGN8 299 aa11.03□□□□□ -0.64
SEC13-204ENST00000397099 RNF5Q99942 180 aa11.03□□□□□ -0.64
SEC13-204ENST00000397099 GPR61Q9BZJ8 451 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms