RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 RAB9AP51151 201 aa13.59□□□□□ -0.23
SNRPA1-202ENST00000394082 CRIP2P52943 208 aaPredicted RBP13.59□□□□□ -0.23
SNRPA1-202ENST00000394082 GABPB1Q06547 395 aaPredicted RBP13.59□□□□□ -0.23
SNRPA1-202ENST00000394082 C5orf64Q2M2E5 130 aa13.59□□□□□ -0.23
SNRPA1-202ENST00000394082 C6orf141Q5SZD1 244 aa13.59□□□□□ -0.23
SNRPA1-202ENST00000394082 ASPHD1Q5U4P2 390 aa13.59□□□□□ -0.23
SNRPA1-202ENST00000394082 OR14A2Q96R54 314 aa13.59□□□□□ -0.23
SNRPA1-202ENST00000394082 ZNF251Q9BRH9 671 aa13.59□□□□□ -0.23
SNRPA1-202ENST00000394082 TRAV41A0A0B4J266 112 aa13.58□□□□□ -0.24
SNRPA1-202ENST00000394082 ATP6V0E1O15342 81 aa13.58□□□□□ -0.24
SNRPA1-202ENST00000394082 MYF6P23409 242 aa13.58□□□□□ -0.24
SNRPA1-202ENST00000394082 TTC23Q5W5X9 447 aa13.58□□□□□ -0.24
SNRPA1-202ENST00000394082 LIN54Q6MZP7 749 aa13.58□□□□□ -0.24
SNRPA1-202ENST00000394082 TCTEX1D1Q8N7M0 179 aa13.58□□□□□ -0.24
SNRPA1-202ENST00000394082 SETD9Q8NE22 299 aa13.58□□□□□ -0.24
SNRPA1-202ENST00000394082 MRPL30Q8TCC3 161 aaKnown RBP13.58□□□□□ -0.24
SNRPA1-202ENST00000394082 GALMQ96C23 342 aa13.58□□□□□ -0.24
SNRPA1-202ENST00000394082 DERL3Q96Q80 235 aa13.58□□□□□ -0.24
SNRPA1-202ENST00000394082 ANKRD60Q9BZ19 345 aa13.58□□□□□ -0.24
SNRPA1-202ENST00000394082 CST11Q9H112 138 aa13.58□□□□□ -0.24
SNRPA1-202ENST00000394082 BANF2Q9H503 90 aa13.58□□□□□ -0.24
SNRPA1-202ENST00000394082 GNB4Q9HAV0 340 aa13.58□□□□□ -0.24
SNRPA1-202ENST00000394082 C8orf4Q9NR00 106 aa13.58□□□□□ -0.24
SNRPA1-202ENST00000394082 ERGIC3Q9Y282 383 aa13.58□□□□□ -0.24
SNRPA1-202ENST00000394082 SORL1Q92673 2214 aa13.58□□□□□ -0.24
SNRPA1-202ENST00000394082 HUWE1Q7Z6Z7 4374 aaKnown RBP13.57□□□□□ -0.24
SNRPA1-202ENST00000394082 G3V318 75 aa13.57□□□□□ -0.24
SNRPA1-202ENST00000394082 CRTAPO75718 401 aaPredicted RBP13.57□□□□□ -0.24
SNRPA1-202ENST00000394082 MAPK3P27361 379 aaPredicted RBP13.57□□□□□ -0.24
SNRPA1-202ENST00000394082 C19orf54Q5BKX5 351 aa13.57□□□□□ -0.24
SNRPA1-202ENST00000394082 FAM27D1Q5T7N8 215 aa13.57□□□□□ -0.24
SNRPA1-202ENST00000394082 OR52L2PQ8NGH6 319 aa13.57□□□□□ -0.24
SNRPA1-202ENST00000394082 MRPL20Q9BYC9 149 aaKnown RBP13.57□□□□□ -0.24
SNRPA1-202ENST00000394082 GHITMQ9H3K2 345 aa13.57□□□□□ -0.24
SNRPA1-202ENST00000394082 CNOT2Q9NZN8 540 aaKnown RBP13.57□□□□□ -0.24
SNRPA1-202ENST00000394082 WSB1Q9Y6I7 421 aa13.57□□□□□ -0.24
SNRPA1-202ENST00000394082 EFCAB10A6NFE3 127 aa13.56□□□□□ -0.24
SNRPA1-202ENST00000394082 MAS1P04201 325 aa13.56□□□□□ -0.24
SNRPA1-202ENST00000394082 UBBP0CG47 229 aa13.56□□□□□ -0.24
SNRPA1-202ENST00000394082 PPP1CCP36873 323 aaKnown RBP13.56□□□□□ -0.24
SNRPA1-202ENST00000394082 GNB1P62873 340 aa13.56□□□□□ -0.24
SNRPA1-202ENST00000394082 ST3GAL4Q11206 333 aa13.56□□□□□ -0.24
SNRPA1-202ENST00000394082 GNMTQ14749 295 aa13.56□□□□□ -0.24
SNRPA1-202ENST00000394082 HMGN3Q15651 99 aa13.56□□□□□ -0.24
SNRPA1-202ENST00000394082 ZNF660Q6AZW8 331 aaPredicted RBP13.56□□□□□ -0.24
SNRPA1-202ENST00000394082 OR2AK2Q8NG84 335 aa13.56□□□□□ -0.24
SNRPA1-202ENST00000394082 RITA1Q96K30 269 aa13.56□□□□□ -0.24
SNRPA1-202ENST00000394082 PARP11Q9NR21 331 aa13.56□□□□□ -0.24
SNRPA1-202ENST00000394082 PIPOXQ9P0Z9 390 aa13.56□□□□□ -0.24
SNRPA1-202ENST00000394082 KIAA1456Q9P272 454 aa13.56□□□□□ -0.24
SNRPA1-202ENST00000394082 DNAH7Q8WXX0 4024 aa13.55□□□□□ -0.24
SNRPA1-202ENST00000394082 SAA2-SAA4A0A096LPE2 208 aa13.55□□□□□ -0.24
SNRPA1-202ENST00000394082 A0A1W2PPK0 400 aa13.55□□□□□ -0.24
SNRPA1-202ENST00000394082 UBE2QL1A1L167 161 aa13.55□□□□□ -0.24
SNRPA1-202ENST00000394082 OVOL1O14753 267 aa13.55□□□□□ -0.24
SNRPA1-202ENST00000394082 SAA2P0DJI9 122 aaPredicted RBP13.55□□□□□ -0.24
SNRPA1-202ENST00000394082 BLVRBP30043 206 aaPredicted RBP13.55□□□□□ -0.24
SNRPA1-202ENST00000394082 PYHIN1Q6K0P9 492 aa13.55□□□□□ -0.24
SNRPA1-202ENST00000394082 ZFP41Q8N8Y5 198 aa13.55□□□□□ -0.24
SNRPA1-202ENST00000394082 GGHQ92820 318 aa13.55□□□□□ -0.24
SNRPA1-202ENST00000394082 RBMXL1Q96E39 390 aaKnown RBP13.55□□□□□ -0.24
SNRPA1-202ENST00000394082 ITGB1BP1O14713 200 aa13.54□□□□□ -0.24
SNRPA1-202ENST00000394082 RAB29O14966 203 aa13.54□□□□□ -0.24
SNRPA1-202ENST00000394082 ARPC1BO15143 372 aaKnown RBP13.54□□□□□ -0.24
SNRPA1-202ENST00000394082 CELP19835 753 aa13.54□□□□□ -0.24
SNRPA1-202ENST00000394082 CNTFRP26992 372 aa13.54□□□□□ -0.24
SNRPA1-202ENST00000394082 LRRC36Q1X8D7 754 aa13.54□□□□□ -0.24
SNRPA1-202ENST00000394082 CD200R1LQ6Q8B3 271 aa13.54□□□□□ -0.24
SNRPA1-202ENST00000394082 PACRGLQ8N7B6 248 aa13.54□□□□□ -0.24
SNRPA1-202ENST00000394082 DCUN1D4Q92564 292 aa13.54□□□□□ -0.24
SNRPA1-202ENST00000394082 ASCL2Q99929 193 aa13.54□□□□□ -0.24
SNRPA1-202ENST00000394082 RNF5Q99942 180 aa13.54□□□□□ -0.24
SNRPA1-202ENST00000394082 TOLLIPQ9H0E2 274 aa13.54□□□□□ -0.24
SNRPA1-202ENST00000394082 IFI27L2Q9H2X8 130 aa13.54□□□□□ -0.24
SNRPA1-202ENST00000394082 ISYNA1Q9NPH2 558 aa13.54□□□□□ -0.24
SNRPA1-202ENST00000394082 TPSG1Q9NRR2 321 aa13.54□□□□□ -0.24
SNRPA1-202ENST00000394082 ABRACLQ9P1F3 81 aa13.54□□□□□ -0.24
SNRPA1-202ENST00000394082 STEAP1Q9UHE8 339 aa13.54□□□□□ -0.24
SNRPA1-202ENST00000394082 FOXA2Q9Y261 457 aaPredicted RBP13.54□□□□□ -0.24
SNRPA1-202ENST00000394082 OR5H14A6NHG9 310 aa13.53□□□□□ -0.24
SNRPA1-202ENST00000394082 ANKRD65E5RJM6 399 aa13.53□□□□□ -0.24
SNRPA1-202ENST00000394082 LY86O95711 162 aa13.53□□□□□ -0.24
SNRPA1-202ENST00000394082 MC5RP33032 325 aa13.53□□□□□ -0.24
SNRPA1-202ENST00000394082 OR3A3P47888 321 aa13.53□□□□□ -0.24
SNRPA1-202ENST00000394082 WNT4P56705 351 aa13.53□□□□□ -0.24
SNRPA1-202ENST00000394082 TMEM267Q0VDI3 215 aaPredicted RBP13.53□□□□□ -0.24
SNRPA1-202ENST00000394082 RCN1Q15293 331 aa13.53□□□□□ -0.24
SNRPA1-202ENST00000394082 ZNF880Q6PDB4 577 aa13.53□□□□□ -0.24
SNRPA1-202ENST00000394082 MUC7Q8TAX7 377 aa13.53□□□□□ -0.24
SNRPA1-202ENST00000394082 NEDD4LQ96PU5 975 aa13.53□□□□□ -0.24
SNRPA1-202ENST00000394082 RNF150Q9ULK6 438 aa13.53□□□□□ -0.24
SNRPA1-202ENST00000394082 NUBP2Q9Y5Y2 271 aa13.53□□□□□ -0.24
SNRPA1-202ENST00000394082 LINC01619G3V211 115 aa13.52□□□□□ -0.25
SNRPA1-202ENST00000394082 RRHO14718 337 aa13.52□□□□□ -0.25
SNRPA1-202ENST00000394082 SOX15O60248 233 aa13.52□□□□□ -0.25
SNRPA1-202ENST00000394082 RBBP9O75884 186 aa13.52□□□□□ -0.25
SNRPA1-202ENST00000394082 NAPSAO96009 420 aa13.52□□□□□ -0.25
SNRPA1-202ENST00000394082 LGALS1P09382 135 aaKnown RBP13.52□□□□□ -0.25
SNRPA1-202ENST00000394082 CD37P11049 281 aa13.52□□□□□ -0.25
SNRPA1-202ENST00000394082 RPS27AP62979 156 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms