RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 ZNF880Q6PDB4 577 aa13.35□□□□□ -0.27
HMGN4-201ENST00000377575 CD200R1LQ6Q8B3 271 aa13.35□□□□□ -0.27
HMGN4-201ENST00000377575 Q8N6K4 173 aa13.35□□□□□ -0.27
HMGN4-201ENST00000377575 OR2AK2Q8NG84 335 aa13.35□□□□□ -0.27
HMGN4-201ENST00000377575 OR56B1Q8NGI3 324 aa13.35□□□□□ -0.27
HMGN4-201ENST00000377575 IL1F10Q8WWZ1 152 aa13.35□□□□□ -0.27
HMGN4-201ENST00000377575 YTHDF1Q9BYJ9 559 aaKnown RBP13.35□□□□□ -0.27
HMGN4-201ENST00000377575 C12orf4Q9NQ89 552 aa13.35□□□□□ -0.27
HMGN4-201ENST00000377575 AK3Q9UIJ7 227 aa13.35□□□□□ -0.27
HMGN4-201ENST00000377575 TSSC4Q9Y5U2 329 aaPredicted RBP13.35□□□□□ -0.27
HMGN4-201ENST00000377575 TRBV6-6A0A0A6YYG2 114 aa13.34□□□□□ -0.27
HMGN4-201ENST00000377575 TCRBV4S1A1TA0A5B7 111 aa13.34□□□□□ -0.27
HMGN4-201ENST00000377575 PSMB11A5LHX3 300 aa13.34□□□□□ -0.27
HMGN4-201ENST00000377575 ADARB2-AS1A8MUL3 147 aa13.34□□□□□ -0.27
HMGN4-201ENST00000377575 KCNAB3O43448 404 aa13.34□□□□□ -0.27
HMGN4-201ENST00000377575 PSMB9P28065 219 aa13.34□□□□□ -0.27
HMGN4-201ENST00000377575 VEGFCP49767 419 aa13.34□□□□□ -0.27
HMGN4-201ENST00000377575 C2orf76Q3KRA6 126 aa13.34□□□□□ -0.27
HMGN4-201ENST00000377575 HES5Q5TA89 166 aa13.34□□□□□ -0.27
HMGN4-201ENST00000377575 SLC35E3Q7Z769 313 aa13.34□□□□□ -0.27
HMGN4-201ENST00000377575 FOXRED2Q8IWF2 684 aa13.34□□□□□ -0.27
HMGN4-201ENST00000377575 OR8H1Q8NGG4 311 aa13.34□□□□□ -0.27
HMGN4-201ENST00000377575 CHPT1Q8WUD6 406 aa13.34□□□□□ -0.27
HMGN4-201ENST00000377575 LIN7CQ9NUP9 197 aaKnown RBP13.34□□□□□ -0.27
HMGN4-201ENST00000377575 TMEM272A0A1B0GTI8 110 aa13.33□□□□□ -0.28
HMGN4-201ENST00000377575 A0A1W2PRX2 142 aa13.33□□□□□ -0.28
HMGN4-201ENST00000377575 FOXI3A8MTJ6 420 aaPredicted RBP13.33□□□□□ -0.28
HMGN4-201ENST00000377575 SERPINE3A8MV23 424 aa13.33□□□□□ -0.28
HMGN4-201ENST00000377575 PF4V1P10720 104 aa13.33□□□□□ -0.28
HMGN4-201ENST00000377575 RAB3BP20337 219 aa13.33□□□□□ -0.28
HMGN4-201ENST00000377575 HLA-DRB3P79483 266 aa13.33□□□□□ -0.28
HMGN4-201ENST00000377575 LSAMPQ13449 338 aa13.33□□□□□ -0.28
HMGN4-201ENST00000377575 KHDC1LQ5JSQ8 128 aa13.33□□□□□ -0.28
HMGN4-201ENST00000377575 SPARTQ8N0X7 666 aa13.33□□□□□ -0.28
HMGN4-201ENST00000377575 ARHGAP5-AS1Q96IT6 56 aa13.33□□□□□ -0.28
HMGN4-201ENST00000377575 RAB22AQ9UL26 194 aa13.33□□□□□ -0.28
HMGN4-201ENST00000377575 IFITM5A6NNB3 132 aa13.32□□□□□ -0.28
HMGN4-201ENST00000377575 LDLRAD4O15165 306 aa13.32□□□□□ -0.28
HMGN4-201ENST00000377575 IGHG2P01859 326 aa13.32□□□□□ -0.28
HMGN4-201ENST00000377575 OR10A3P58181 314 aa13.32□□□□□ -0.28
HMGN4-201ENST00000377575 SLC35B1P78383 322 aa13.32□□□□□ -0.28
HMGN4-201ENST00000377575 MRPS15P82914 257 aaKnown RBP13.32□□□□□ -0.28
HMGN4-201ENST00000377575 PDLIM3Q53GG5 364 aaPredicted RBP13.32□□□□□ -0.28
HMGN4-201ENST00000377575 C22orf42Q6IC83 251 aa13.32□□□□□ -0.28
HMGN4-201ENST00000377575 FAM71F2Q6NXP2 309 aa13.32□□□□□ -0.28
HMGN4-201ENST00000377575 C5orf24Q7Z6I8 188 aa13.32□□□□□ -0.28
HMGN4-201ENST00000377575 ODF3L1Q8IXM7 274 aa13.32□□□□□ -0.28
HMGN4-201ENST00000377575 Q8N9W7 124 aa13.32□□□□□ -0.28
HMGN4-201ENST00000377575 RASL11BQ9BPW5 248 aa13.32□□□□□ -0.28
HMGN4-201ENST00000377575 CMSS1Q9BQ75 279 aaKnown RBP13.32□□□□□ -0.28
HMGN4-201ENST00000377575 HDHD3Q9BSH5 251 aaPredicted RBP13.32□□□□□ -0.28
HMGN4-201ENST00000377575 PECRQ9BY49 303 aa13.32□□□□□ -0.28
HMGN4-201ENST00000377575 ABCG5Q9H222 651 aa13.32□□□□□ -0.28
HMGN4-201ENST00000377575 SAA2-SAA4A0A096LPE2 208 aa13.31□□□□□ -0.28
HMGN4-201ENST00000377575 ZNF736B4DX44 427 aaPredicted RBP13.31□□□□□ -0.28
HMGN4-201ENST00000377575 SAA2P0DJI9 122 aaPredicted RBP13.31□□□□□ -0.28
HMGN4-201ENST00000377575 GADD45AP24522 165 aa13.31□□□□□ -0.28
HMGN4-201ENST00000377575 TCTEX1D4Q5JR98 221 aa13.31□□□□□ -0.28
HMGN4-201ENST00000377575 ZNF773Q6PK81 442 aa13.31□□□□□ -0.28
HMGN4-201ENST00000377575 C10orf99Q6UWK7 81 aa13.31□□□□□ -0.28
HMGN4-201ENST00000377575 Q6ZPA2 131 aa13.31□□□□□ -0.28
HMGN4-201ENST00000377575 ZNF833PQ6ZTB9 187 aa13.31□□□□□ -0.28
HMGN4-201ENST00000377575 C1QL4Q86Z23 238 aa13.31□□□□□ -0.28
HMGN4-201ENST00000377575 S1PR3Q99500 378 aa13.31□□□□□ -0.28
HMGN4-201ENST00000377575 MRPL20Q9BYC9 149 aaKnown RBP13.31□□□□□ -0.28
HMGN4-201ENST00000377575 IFI27L2Q9H2X8 130 aa13.31□□□□□ -0.28
HMGN4-201ENST00000377575 PIPOXQ9P0Z9 390 aa13.31□□□□□ -0.28
HMGN4-201ENST00000377575 STUB1Q9UNE7 303 aa13.31□□□□□ -0.28
HMGN4-201ENST00000377575 SHISA3A0PJX4 238 aa13.3□□□□□ -0.28
HMGN4-201ENST00000377575 AP4M1O00189 453 aa13.3□□□□□ -0.28
HMGN4-201ENST00000377575 HSPA12AO43301 675 aa13.3□□□□□ -0.28
HMGN4-201ENST00000377575 PF4P02776 101 aa13.3□□□□□ -0.28
HMGN4-201ENST00000377575 RAB6AP20340 208 aa13.3□□□□□ -0.28
HMGN4-201ENST00000377575 ZBTB25P24278 435 aa13.3□□□□□ -0.28
HMGN4-201ENST00000377575 GPR12P47775 334 aa13.3□□□□□ -0.28
HMGN4-201ENST00000377575 TMEM50BP56557 158 aa13.3□□□□□ -0.28
HMGN4-201ENST00000377575 STPG2Q8N412 459 aa13.3□□□□□ -0.28
HMGN4-201ENST00000377575 COMMD1Q8N668 190 aa13.3□□□□□ -0.28
HMGN4-201ENST00000377575 EDARADDQ8WWZ3 215 aa13.3□□□□□ -0.28
HMGN4-201ENST00000377575 RAB3CQ96E17 227 aa13.3□□□□□ -0.28
HMGN4-201ENST00000377575 NOL4LQ96MY1 436 aaPredicted RBP13.3□□□□□ -0.28
HMGN4-201ENST00000377575 GON7Q9BXV9 100 aa13.3□□□□□ -0.28
HMGN4-201ENST00000377575 Q9N2K0 584 aa13.3□□□□□ -0.28
HMGN4-201ENST00000377575 SLC23A1Q9UHI7 598 aa13.3□□□□□ -0.28
HMGN4-201ENST00000377575 G3V4G9 280 aa13.29□□□□□ -0.28
HMGN4-201ENST00000377575 ITGB1BP1O14713 200 aa13.29□□□□□ -0.28
HMGN4-201ENST00000377575 RAB29O14966 203 aa13.29□□□□□ -0.28
HMGN4-201ENST00000377575 ST8SIA5O15466 376 aa13.29□□□□□ -0.28
HMGN4-201ENST00000377575 RRP9O43818 475 aaKnown RBP13.29□□□□□ -0.28
HMGN4-201ENST00000377575 CD3GP09693 182 aa13.29□□□□□ -0.28
HMGN4-201ENST00000377575 FGF9P31371 208 aaPredicted RBP13.29□□□□□ -0.28
HMGN4-201ENST00000377575 OR3A3P47888 321 aa13.29□□□□□ -0.28
HMGN4-201ENST00000377575 MMDQ15546 238 aa13.29□□□□□ -0.28
HMGN4-201ENST00000377575 PLAC9Q5JTB6 97 aa13.29□□□□□ -0.28
HMGN4-201ENST00000377575 SAMD5Q5TGI4 173 aa13.29□□□□□ -0.28
HMGN4-201ENST00000377575 ZNF329Q86UD4 541 aa13.29□□□□□ -0.28
HMGN4-201ENST00000377575 FAM71E2Q8N5Q1 922 aa13.29□□□□□ -0.28
HMGN4-201ENST00000377575 NABP2Q9BQ15 211 aa13.29□□□□□ -0.28
HMGN4-201ENST00000377575 GHITMQ9H3K2 345 aa13.29□□□□□ -0.28
HMGN4-201ENST00000377575 PLSCR3Q9NRY6 295 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms