RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 OR8H1Q8NGG4 311 aa17.63■□□□□ 0.41
SRM-201ENST00000376957 EDARADDQ8WWZ3 215 aa17.63■□□□□ 0.41
SRM-201ENST00000376957 LDLRAD4O15165 306 aa17.62■□□□□ 0.41
SRM-201ENST00000376957 TNFAIP8O95379 198 aa17.62■□□□□ 0.41
SRM-201ENST00000376957 TIMM50Q3ZCQ8 353 aa17.62■□□□□ 0.41
SRM-201ENST00000376957 ZNF880Q6PDB4 577 aa17.62■□□□□ 0.41
SRM-201ENST00000376957 OR5AU1Q8NGC0 362 aa17.62■□□□□ 0.41
SRM-201ENST00000376957 OR4X2Q8NGF9 303 aa17.62■□□□□ 0.41
SRM-201ENST00000376957 PIPOXQ9P0Z9 390 aa17.62■□□□□ 0.41
SRM-201ENST00000376957 SLC31A2O15432 143 aa17.61■□□□□ 0.41
SRM-201ENST00000376957 SCGNO76038 276 aa17.61■□□□□ 0.41
SRM-201ENST00000376957 OPN1MWP04001 364 aa17.61■□□□□ 0.41
SRM-201ENST00000376957 OPN1MW2P0DN77 364 aa17.61■□□□□ 0.41
SRM-201ENST00000376957 OPN1MW3P0DN78 364 aa17.61■□□□□ 0.41
SRM-201ENST00000376957 HLA-DRB3P79483 266 aa17.61■□□□□ 0.41
SRM-201ENST00000376957 Q6ZS46 218 aa17.61■□□□□ 0.41
SRM-201ENST00000376957 NDUFA11Q86Y39 141 aa17.61■□□□□ 0.41
SRM-201ENST00000376957 OR10R2Q8NGX6 335 aa17.61■□□□□ 0.41
SRM-201ENST00000376957 EAF1Q96JC9 268 aaPredicted RBP17.61■□□□□ 0.41
SRM-201ENST00000376957 S1PR3Q99500 378 aa17.61■□□□□ 0.41
SRM-201ENST00000376957 ATG5Q9H1Y0 275 aa17.61■□□□□ 0.41
SRM-201ENST00000376957 A0A087WXM4 84 aa17.6■□□□□ 0.41
SRM-201ENST00000376957 IGHV3-72A0A0B4J1Y9 119 aa17.6■□□□□ 0.41
SRM-201ENST00000376957 SERPINE3A8MV23 424 aa17.6■□□□□ 0.41
SRM-201ENST00000376957 RAB29O14966 203 aa17.6■□□□□ 0.41
SRM-201ENST00000376957 TALDO1P37837 337 aa17.6■□□□□ 0.41
SRM-201ENST00000376957 TMEM50BP56557 158 aa17.6■□□□□ 0.41
SRM-201ENST00000376957 GNMTQ14749 295 aa17.6■□□□□ 0.41
SRM-201ENST00000376957 KIR2DS1Q14954 304 aa17.6■□□□□ 0.41
SRM-201ENST00000376957 FAM53AQ6NSI3 398 aaPredicted RBP17.6■□□□□ 0.41
SRM-201ENST00000376957 FOXRED2Q8IWF2 684 aa17.6■□□□□ 0.41
SRM-201ENST00000376957 C5orf56Q8N8D9 126 aa17.6■□□□□ 0.41
SRM-201ENST00000376957 OR4F17Q8NGA8 305 aa17.6■□□□□ 0.41
SRM-201ENST00000376957 FAM110DQ8TAY7 271 aaPredicted RBP17.6■□□□□ 0.41
SRM-201ENST00000376957 PHF21AQ96BD5 680 aa17.6■□□□□ 0.41
SRM-201ENST00000376957 OR4F4Q96R69 305 aa17.6■□□□□ 0.41
SRM-201ENST00000376957 RASL11BQ9BPW5 248 aa17.6■□□□□ 0.41
SRM-201ENST00000376957 CHCHD6Q9BRQ6 235 aa17.6■□□□□ 0.41
SRM-201ENST00000376957 Q9N2K0 584 aa17.6■□□□□ 0.41
SRM-201ENST00000376957 SLC23A1Q9UHI7 598 aa17.6■□□□□ 0.41
SRM-201ENST00000376957 LOC100506127A0A0U1RQW1 187 aa17.59■□□□□ 0.41
SRM-201ENST00000376957 SHISA3A0PJX4 238 aa17.59■□□□□ 0.41
SRM-201ENST00000376957 FOXI3A8MTJ6 420 aaPredicted RBP17.59■□□□□ 0.41
SRM-201ENST00000376957 CD28P10747 220 aa17.59■□□□□ 0.41
SRM-201ENST00000376957 CD36P16671 472 aa17.59■□□□□ 0.41
SRM-201ENST00000376957 SERPINB10P48595 397 aa17.59■□□□□ 0.41
SRM-201ENST00000376957 ARFRP1Q13795 201 aa17.59■□□□□ 0.41
SRM-201ENST00000376957 FAM71F2Q6NXP2 309 aa17.59■□□□□ 0.41
SRM-201ENST00000376957 CHPT1Q8WUD6 406 aa17.59■□□□□ 0.41
SRM-201ENST00000376957 LIN7CQ9NUP9 197 aaKnown RBP17.59■□□□□ 0.41
SRM-201ENST00000376957 TRDCB7Z8K6 153 aa17.58■□□□□ 0.4
SRM-201ENST00000376957 ITGB1BP1O14713 200 aa17.58■□□□□ 0.4
SRM-201ENST00000376957 AMY1AP04745 511 aa17.58■□□□□ 0.4
SRM-201ENST00000376957 AMY2AP04746 511 aa17.58■□□□□ 0.4
SRM-201ENST00000376957 CEACAM6P40199 344 aa17.58■□□□□ 0.4
SRM-201ENST00000376957 SLC35B1P78383 322 aa17.58■□□□□ 0.4
SRM-201ENST00000376957 TMEM95Q3KNT9 176 aa17.58■□□□□ 0.4
SRM-201ENST00000376957 PLAC9Q5JTB6 97 aa17.58■□□□□ 0.4
SRM-201ENST00000376957 TSPAN14Q8NG11 270 aa17.58■□□□□ 0.4
SRM-201ENST00000376957 GON7Q9BXV9 100 aa17.58■□□□□ 0.4
SRM-201ENST00000376957 OR51E2Q9H255 320 aa17.58■□□□□ 0.4
SRM-201ENST00000376957 DAPK2Q9UIK4 370 aa17.58■□□□□ 0.4
SRM-201ENST00000376957 A0A075B6Q4 140 aa17.57■□□□□ 0.4
SRM-201ENST00000376957 KCNAB3O43448 404 aa17.57■□□□□ 0.4
SRM-201ENST00000376957 TSPAN15O95858 294 aa17.57■□□□□ 0.4
SRM-201ENST00000376957 LSAMPQ13449 338 aa17.57■□□□□ 0.4
SRM-201ENST00000376957 NSUN5P1Q3KNT7 163 aa17.57■□□□□ 0.4
SRM-201ENST00000376957 SLC35E3Q7Z769 313 aa17.57■□□□□ 0.4
SRM-201ENST00000376957 OR4A4PQ8NGN8 299 aa17.57■□□□□ 0.4
SRM-201ENST00000376957 HDHD3Q9BSH5 251 aaPredicted RBP17.57■□□□□ 0.4
SRM-201ENST00000376957 NBEAL1Q6ZS30 2694 aa17.57■□□□□ 0.4
SRM-201ENST00000376957 TCRBV4S1A1TA0A5B7 111 aa17.56■□□□□ 0.4
SRM-201ENST00000376957 PSMB11A5LHX3 300 aa17.56■□□□□ 0.4
SRM-201ENST00000376957 TMEM127O75204 238 aa17.56■□□□□ 0.4
SRM-201ENST00000376957 SLC2A2P11168 524 aaPredicted RBP17.56■□□□□ 0.4
SRM-201ENST00000376957 HIST1H1DP16402 221 aaKnown RBP17.56■□□□□ 0.4
SRM-201ENST00000376957 SDC2P34741 201 aa17.56■□□□□ 0.4
SRM-201ENST00000376957 SCAND1P57086 179 aa17.56■□□□□ 0.4
SRM-201ENST00000376957 SFXN4Q6P4A7 337 aa17.56■□□□□ 0.4
SRM-201ENST00000376957 CITED2Q99967 270 aaPredicted RBP17.56■□□□□ 0.4
SRM-201ENST00000376957 ZNF221Q9UK13 617 aa17.56■□□□□ 0.4
SRM-201ENST00000376957 SAA2-SAA4A0A096LPE2 208 aa17.55■□□□□ 0.4
SRM-201ENST00000376957 SMIM30A4D0T7 59 aa17.55■□□□□ 0.4
SRM-201ENST00000376957 SH2D7A6NKC9 451 aaPredicted RBP17.55■□□□□ 0.4
SRM-201ENST00000376957 RRP9O43818 475 aaKnown RBP17.55■□□□□ 0.4
SRM-201ENST00000376957 SCTP09683 121 aa17.55■□□□□ 0.4
SRM-201ENST00000376957 SAA2P0DJI9 122 aaPredicted RBP17.55■□□□□ 0.4
SRM-201ENST00000376957 GNB3P16520 340 aa17.55■□□□□ 0.4
SRM-201ENST00000376957 MC5RP33032 325 aa17.55■□□□□ 0.4
SRM-201ENST00000376957 FBLN7Q53RD9 439 aa17.55■□□□□ 0.4
SRM-201ENST00000376957 ZNF833PQ6ZTB9 187 aa17.55■□□□□ 0.4
SRM-201ENST00000376957 CROCCP3Q8IVE0 287 aa17.55■□□□□ 0.4
SRM-201ENST00000376957 Q8N6K4 173 aa17.55■□□□□ 0.4
SRM-201ENST00000376957 OR10J5Q8NHC4 309 aa17.55■□□□□ 0.4
SRM-201ENST00000376957 WIPF2Q8TF74 440 aaPredicted RBP17.55■□□□□ 0.4
SRM-201ENST00000376957 ZNF251Q9BRH9 671 aa17.55■□□□□ 0.4
SRM-201ENST00000376957 ABCG5Q9H222 651 aa17.55■□□□□ 0.4
SRM-201ENST00000376957 TSSC4Q9Y5U2 329 aaPredicted RBP17.55■□□□□ 0.4
SRM-201ENST00000376957 AP4M1O00189 453 aa17.54■□□□□ 0.4
SRM-201ENST00000376957 RAB27BO00194 218 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms