RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 EIF3LQ9Y262 564 aaKnown RBP-2.08□□□□□ -2.74
RNU6-228P-201ENST00000362700 TIMM8BQ9Y5J9 83 aaPredicted RBP-2.08□□□□□ -2.74
RNU6-228P-201ENST00000362700 CEP170Q5SW79 1584 aa-2.08□□□□□ -2.74
RNU6-228P-201ENST00000362700 THOC2Q8NI27 1593 aaKnown RBP-2.08□□□□□ -2.74
RNU6-228P-201ENST00000362700 MAGI3Q5TCQ9 1506 aa-2.08□□□□□ -2.74
RNU6-228P-201ENST00000362700 ANKRD36CQ5JPF3 1778 aa-2.08□□□□□ -2.74
RNU6-228P-201ENST00000362700 CUX2O14529 1486 aa-2.08□□□□□ -2.74
RNU6-228P-201ENST00000362700 ARAP1Q96P48 1450 aa-2.08□□□□□ -2.74
RNU6-228P-201ENST00000362700 DOT1LQ8TEK3 1739 aa-2.08□□□□□ -2.74
RNU6-228P-201ENST00000362700 MYOM3Q5VTT5 1437 aa-2.08□□□□□ -2.74
RNU6-228P-201ENST00000362700 MYOM1P52179 1685 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 CEMIPQ8WUJ3 1361 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 LOC100509620A0A075B734 347 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 LOC102723996A0A087X1L8 192 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 IGHV3-21A0A0B4J1V1 117 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 A0A0B4J2A0 478 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 TEX50A0A1B0GTY4 177 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 A0A1W2PNV4 684 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 PRSS37A4D1T9 235 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 GGT3PA6NGU5 568 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 GOLGA8JA6NMD2 632 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 GOLGA8KD6RF30 607 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 ANKRD65E5RJM6 399 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 NDUFAB1O14561 156 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 ACOX3O15254 700 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 FGF16O43320 207 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 SSX5O60225 188 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 CDC40O60508 579 aaKnown RBP eCLIP-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 SYNGR4O95473 234 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 CRHP06850 196 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 MSMBP08118 114 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 KRT7P08729 469 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 OR52Z1P0C646 297 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 SCGB1A1P11684 91 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 AREGP15514 252 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 GSTM3P21266 225 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 GTF2E2P29084 291 aaKnown RBP-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 ERP29P30040 261 aaKnown RBP-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 S100A5P33763 92 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 GGT2P36268 569 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 FRKP42685 505 aaPredicted RBP-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 UBE2D1P51668 147 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 AP2S1P53680 142 aaPredicted RBP-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 OR2B6P58173 313 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 C1QTNF8P60827 252 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 CETN1Q12798 172 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 PDZK1IP1Q13113 114 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 EIF2B1Q14232 305 aaKnown RBP-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 CCDC40Q4G0X9 1142 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 CCDC184Q52MB2 194 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 BOLA3Q53S33 107 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 OCIAD2Q56VL3 154 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 PHYHD1Q5SRE7 291 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 MPP7Q5T2T1 576 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 TMEM215Q68D42 235 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 LPCAT3Q6P1A2 487 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 ZYG11AQ6WRX3 759 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 NCCRP1Q6ZVX7 275 aaPredicted RBP-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 SLC35E3Q7Z769 313 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 LRRC34Q8IZ02 419 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 C10orf111Q8N326 155 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 OR5T1Q8NG75 326 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 OR4S1Q8NGB4 309 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 OR10G6Q8NH81 332 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 OR5K2Q8NHB8 316 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 ZNF675Q8TD23 568 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 CYGBQ8WWM9 190 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 ARPC1AQ92747 370 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 CCDC127Q96BQ5 260 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 CMBLQ96DG6 245 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 GSDMAQ96QA5 445 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 FERMT1Q9BQL6 677 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 PSMG3Q9BT73 122 aaPredicted RBP-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 GGACTQ9BVM4 153 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 TMEM59Q9BXS4 323 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 RMND5AQ9H871 391 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 CDKN2A-AS1Q9UH64 79 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 SHPKQ9UHJ6 478 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 CD84Q9UIB8 345 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 TP53TG1Q9Y2A0 90 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 SNX24Q9Y343 169 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 PXMP4Q9Y6I8 212 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 XRN1Q8IZH2 1706 aaKnown RBP-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 SYNJ2O15056 1496 aa-2.09□□□□□ -2.74
RNU6-228P-201ENST00000362700 FLT4P35916 1363 aa-2.1□□□□□ -2.74
RNU6-228P-201ENST00000362700 TOGARAM1Q9Y4F4 1720 aa-2.1□□□□□ -2.75
RNU6-228P-201ENST00000362700 OR5B21A6NL26 309 aa-2.1□□□□□ -2.75
RNU6-228P-201ENST00000362700 F5H768 121 aa-2.1□□□□□ -2.75
RNU6-228P-201ENST00000362700 F8VRH5 84 aa-2.1□□□□□ -2.75
RNU6-228P-201ENST00000362700 RNASEK-C17orf49H0YIS7 233 aa-2.1□□□□□ -2.75
RNU6-228P-201ENST00000362700 UBFD1O14562 309 aaKnown RBP-2.1□□□□□ -2.75
RNU6-228P-201ENST00000362700 CREB3O43889 395 aa-2.1□□□□□ -2.75
RNU6-228P-201ENST00000362700 REM1O75628 298 aa-2.1□□□□□ -2.75
RNU6-228P-201ENST00000362700 GABARAPO95166 117 aa-2.1□□□□□ -2.75
RNU6-228P-201ENST00000362700 TDP2O95551 362 aa-2.1□□□□□ -2.75
RNU6-228P-201ENST00000362700 HLA-DRB1P01911 266 aa-2.1□□□□□ -2.75
RNU6-228P-201ENST00000362700 MBP02144 154 aa-2.1□□□□□ -2.75
RNU6-228P-201ENST00000362700 PTHLHP12272 177 aa-2.1□□□□□ -2.75
RNU6-228P-201ENST00000362700 HMGA1P17096 107 aaKnown RBP-2.1□□□□□ -2.75
RNU6-228P-201ENST00000362700 PSMA1P25786 263 aaKnown RBP-2.1□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms