RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 SLC2A9Q9NRM0 540 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 RASL12Q9NYN1 266 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 ELOVL5Q9NYP7 299 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 COMMD9Q9P000 198 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 PKDREJQ9NTG1 2253 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 IGKV1D-13A0A0B4J2D9 117 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 TRGV8A0A0C4DH27 118 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 KCNAB3O43448 404 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 MBP02144 154 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 OR5AC1P0C628 307 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 IGKV1-13P0DP09 117 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 PVALBP20472 110 aaPredicted RBP7.75□□□□□ -1.17
ATG4A-202ENST00000345734 UCP3P55916 312 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 HLA-DRB3P79483 266 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 SMCO1Q147U7 214 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 SPIN3Q5JUX0 258 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 AVPI1Q5T686 147 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 C11orf87Q6NUJ2 197 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 PCSK4Q6UW60 755 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 ZNF497Q6ZNH5 498 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 ZNF546Q86UE3 836 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 LRRC29Q8WV35 223 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 SECTM1Q8WVN6 248 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 PIK3IP1Q96FE7 263 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 KIRREL1Q96J84 757 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 DMRTA2Q96SC8 542 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 MFFQ9GZY8 342 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 ARL6Q9H0F7 186 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 METTL8Q9H825 291 aaKnown RBP7.75□□□□□ -1.17
ATG4A-202ENST00000345734 TAAR3PQ9P1P4 343 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 CACNA1AO00555 2505 aa7.74□□□□□ -1.17
ATG4A-202ENST00000345734 DSCAMO60469 2012 aa7.74□□□□□ -1.17
ATG4A-202ENST00000345734 FAM74A7A6NL05 159 aa7.74□□□□□ -1.17
ATG4A-202ENST00000345734 SPRY3O43610 288 aa7.74□□□□□ -1.17
ATG4A-202ENST00000345734 TUSC2O75896 110 aa7.74□□□□□ -1.17
ATG4A-202ENST00000345734 EGR1P18146 543 aa7.74□□□□□ -1.17
ATG4A-202ENST00000345734 GNRHRP30968 328 aa7.74□□□□□ -1.17
ATG4A-202ENST00000345734 S100A11P31949 105 aa7.74□□□□□ -1.17
ATG4A-202ENST00000345734 MDH2P40926 338 aaKnown RBP7.74□□□□□ -1.17
ATG4A-202ENST00000345734 CD200P41217 278 aa7.74□□□□□ -1.17
ATG4A-202ENST00000345734 RAB5BP61020 215 aa7.74□□□□□ -1.17
ATG4A-202ENST00000345734 TMEM187Q14656 261 aa7.74□□□□□ -1.17
ATG4A-202ENST00000345734 FAM74A3Q4VXF1 159 aa7.74□□□□□ -1.17
ATG4A-202ENST00000345734 LDLRAD3Q86YD5 345 aa7.74□□□□□ -1.17
ATG4A-202ENST00000345734 RND1Q92730 232 aa7.74□□□□□ -1.17
ATG4A-202ENST00000345734 LRRC46Q96FV0 321 aa7.74□□□□□ -1.17
ATG4A-202ENST00000345734 OR2V2Q96R30 315 aa7.74□□□□□ -1.17
ATG4A-202ENST00000345734 GPHA2Q96T91 129 aa7.74□□□□□ -1.17
ATG4A-202ENST00000345734 VRK1Q99986 396 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-202ENST00000345734 NMES1Q9C002 83 aa7.74□□□□□ -1.17
ATG4A-202ENST00000345734 IGLV3-9A0A075B6K5 115 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 DPRXA6NFQ7 191 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 DIRAS3O95661 229 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 APOC3P02656 99 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 SLC25A4P12235 298 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 FOLR2P14207 255 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 RPA2P15927 270 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 PAX6P26367 422 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 PSMB6P28072 239 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 KCNJ3P48549 501 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 KLRB1Q12918 225 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 DNLZQ5SXM8 178 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 GAPTQ8N292 157 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 PRR18Q8N4B5 295 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 BOLLQ8N9W6 283 aaKnown RBP7.73□□□□□ -1.17
ATG4A-202ENST00000345734 ZBTB34Q8NCN2 500 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 IL1F10Q8WWZ1 152 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 MRPL24Q96A35 216 aaKnown RBP7.73□□□□□ -1.17
ATG4A-202ENST00000345734 OR1A1Q9P1Q5 309 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 TRAPPC2LQ9UL33 140 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 TNFSF18Q9UNG2 199 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 GAB2Q9UQC2 676 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 MEMO1Q9Y316 297 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 LRBAP50851 2863 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 TRBV6-7A0A0A0MS04 114 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 H0YIZ8 118 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.73□□□□□ -1.17
ATG4A-202ENST00000345734 HSD17B6O14756 317 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 TCAPO15273 167 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 CTXN2P0C2S0 81 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 LMO1P25800 156 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 COL10A1Q03692 680 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 BSPH1Q075Z2 132 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 MZT1Q08AG7 82 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 GUCA2BQ16661 112 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 BEX5Q5H9J7 111 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 TMEM108Q6UXF1 575 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 ZNF818PQ6ZRF7 136 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 MOGAT3Q86VF5 341 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 OR4A4PQ8NGN8 299 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 PCNPQ8WW12 178 aaKnown RBP7.73□□□□□ -1.17
ATG4A-202ENST00000345734 ITLN1Q8WWA0 313 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 GALNT14Q96FL9 552 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 C2orf50Q96LR7 162 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 VKORC1Q9BQB6 163 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 RNF126Q9BV68 326 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 SLC5A7Q9GZV3 580 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 GSKIPQ9P0R6 139 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 DYSFO75923 2080 aa7.73□□□□□ -1.17
ATG4A-202ENST00000345734 IGHV3OR15-7A0A075B7D8 119 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms