RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 OR5I1Q13606 314 aa12.15□□□□□ -0.46
PABPC1-201ENST00000318607 ZNF506Q5JVG8 444 aa12.15□□□□□ -0.46
PABPC1-201ENST00000318607 DPPA3Q6W0C5 159 aa12.15□□□□□ -0.46
PABPC1-201ENST00000318607 SLC25A45Q8N413 288 aa12.15□□□□□ -0.46
PABPC1-201ENST00000318607 ZNF709Q8N972 641 aa12.15□□□□□ -0.46
PABPC1-201ENST00000318607 CDCA3Q99618 268 aaPredicted RBP12.15□□□□□ -0.46
PABPC1-201ENST00000318607 OCIAD1Q9NX40 245 aa12.15□□□□□ -0.46
PABPC1-201ENST00000318607 FKBP11Q9NYL4 201 aa12.15□□□□□ -0.46
PABPC1-201ENST00000318607 PGLYRP1O75594 196 aaPredicted RBP12.15□□□□□ -0.46
PABPC1-201ENST00000318607 G6PCP35575 357 aa12.15□□□□□ -0.46
PABPC1-201ENST00000318607 PSMB3P49720 205 aa12.15□□□□□ -0.46
PABPC1-201ENST00000318607 HES3Q5TGS1 186 aa12.15□□□□□ -0.46
PABPC1-201ENST00000318607 SLC35E3Q7Z769 313 aa12.15□□□□□ -0.46
PABPC1-201ENST00000318607 FOXB1Q99853 325 aa12.15□□□□□ -0.46
PABPC1-201ENST00000318607 PARLQ9H300 379 aa12.15□□□□□ -0.46
PABPC1-201ENST00000318607 FBLN5Q9UBX5 448 aa12.15□□□□□ -0.46
PABPC1-201ENST00000318607 TRAPPC1Q9Y5R8 145 aa12.15□□□□□ -0.46
PABPC1-201ENST00000318607 IGHV1OR15-9A0A0B4J2B8 117 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 SYNGR2O43760 224 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 TCL1AP56279 114 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 DMRTA1Q5VZB9 504 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 VHLLQ6RSH7 139 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 Q6ZVH6 145 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 TMEM18Q96B42 140 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 TM2D1Q9BX74 207 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 PARD6AQ9NPB6 346 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 PIEZO2Q9H5I5 2752 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 ADAMTS9Q9P2N4 1935 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 ELOA3CA0A087WX78 387 aaPredicted RBP12.14□□□□□ -0.47
PABPC1-201ENST00000318607 A8MWP6 167 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 GRPP07492 148 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 PRB4P10163 310 aaPredicted RBP12.14□□□□□ -0.47
PABPC1-201ENST00000318607 MPLP40238 635 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 SUCLG1P53597 346 aaKnown RBP12.14□□□□□ -0.47
PABPC1-201ENST00000318607 HERPUD1Q15011 391 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 EXT1Q16394 746 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 TRIM61Q5EBN2 209 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 SDF2L1Q9HCN8 221 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 LILRA5A6NI73 299 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 NUPR1O60356 82 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 PIAS2O75928 621 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 CDS2O95674 445 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 CFIP05156 583 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 CST2P09228 141 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 NPSP0C0P6 89 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 MSX1P28360 303 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 SLC38A11Q08AI6 406 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 PRDX4Q13162 271 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 LPAL2Q16609 132 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 FFAR4Q5NUL3 377 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 TMEM183AQ8IXX5 376 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 OR2T10Q8NGZ9 312 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 ZDHHC16Q969W1 377 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 SPSB1Q96BD6 273 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 TAAR3PQ9P1P4 343 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 MED12LQ86YW9 2145 aa12.14□□□□□ -0.47
PABPC1-201ENST00000318607 OPN1MWP04001 364 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 OPN1MW2P0DN77 364 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 OPN1MW3P0DN78 364 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 FGF5P12034 268 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 CA6P23280 308 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 RAC1P63000 192 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 BAGE3Q86Y29 109 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 BAGE2Q86Y30 109 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 C1QL4Q86Z23 238 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 ZNF441Q8N8Z8 693 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 ARV1Q9H2C2 271 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 DMXL2Q8TDJ6 3036 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 LILRA1O75019 489 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 NDUFB4O95168 129 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 IFNA1P01562 189 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 RFPL3SP0C7P2 107 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 LMO1P25800 156 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 HIST1H3AP68431 136 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 TNFRSF9Q07011 255 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 LHFPL2Q6ZUX7 228 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 BTF3L4Q96K17 158 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 AQP7O14520 342 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 TCF21O43680 179 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 RHBDL1O75783 438 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 IGKV1D-33P01593 117 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 IGKV1-33P01594 117 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 C1QTNF9P0C862 333 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 RNF151Q2KHN1 245 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 RPP25LQ8N5L8 163 aaKnown RBP12.13□□□□□ -0.47
PABPC1-201ENST00000318607 OR10G4Q8NGN3 311 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 OR10G9Q8NGN4 311 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 OR10G7Q8NGN6 311 aa12.13□□□□□ -0.47
PABPC1-201ENST00000318607 ZNF552Q9H707 407 aaPredicted RBP12.13□□□□□ -0.47
PABPC1-201ENST00000318607 NTF3P20783 257 aa12.12□□□□□ -0.47
PABPC1-201ENST00000318607 CBLN1P23435 193 aa12.12□□□□□ -0.47
PABPC1-201ENST00000318607 CD27P26842 260 aa12.12□□□□□ -0.47
PABPC1-201ENST00000318607 GDF1P27539 372 aa12.12□□□□□ -0.47
PABPC1-201ENST00000318607 MEF2BQ02080 365 aaPredicted RBP12.12□□□□□ -0.47
PABPC1-201ENST00000318607 JOSD1Q15040 202 aaPredicted RBP12.12□□□□□ -0.47
PABPC1-201ENST00000318607 ZDHHC11Q9H8X9 412 aa12.12□□□□□ -0.47
PABPC1-201ENST00000318607 VAX2Q9UIW0 290 aa12.12□□□□□ -0.47
PABPC1-201ENST00000318607 IGKV1-6A0A0C4DH72 117 aa12.12□□□□□ -0.47
PABPC1-201ENST00000318607 FAM166BA8MTA8 275 aa12.12□□□□□ -0.47
PABPC1-201ENST00000318607 GYPAP02724 150 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms