RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 ZNF880Q6PDB4 577 aa20.95■□□□□ 0.94
CDKN2A-201ENST00000304494 C1QL4Q86Z23 238 aa20.95■□□□□ 0.94
CDKN2A-201ENST00000304494 SETD6Q8TBK2 473 aa20.95■□□□□ 0.94
CDKN2A-201ENST00000304494 IL1F10Q8WWZ1 152 aa20.95■□□□□ 0.94
CDKN2A-201ENST00000304494 LIN7CQ9NUP9 197 aaKnown RBP20.95■□□□□ 0.94
CDKN2A-201ENST00000304494 MGAT4AQ9UM21 535 aa20.95■□□□□ 0.94
CDKN2A-201ENST00000304494 TRBV6-6A0A0A6YYG2 114 aa20.94■□□□□ 0.94
CDKN2A-201ENST00000304494 SERPINE3A8MV23 424 aa20.94■□□□□ 0.94
CDKN2A-201ENST00000304494 IGHG2P01859 326 aa20.94■□□□□ 0.94
CDKN2A-201ENST00000304494 CLDN12P56749 244 aa20.94■□□□□ 0.94
CDKN2A-201ENST00000304494 C2orf76Q3KRA6 126 aa20.94■□□□□ 0.94
CDKN2A-201ENST00000304494 C5orf24Q7Z6I8 188 aa20.94■□□□□ 0.94
CDKN2A-201ENST00000304494 SLC35E3Q7Z769 313 aa20.94■□□□□ 0.94
CDKN2A-201ENST00000304494 FOXRED2Q8IWF2 684 aa20.94■□□□□ 0.94
CDKN2A-201ENST00000304494 OR2AK2Q8NG84 335 aa20.94■□□□□ 0.94
CDKN2A-201ENST00000304494 OR56B1Q8NGI3 324 aa20.94■□□□□ 0.94
CDKN2A-201ENST00000304494 YTHDF1Q9BYJ9 559 aaKnown RBP20.94■□□□□ 0.94
CDKN2A-201ENST00000304494 AK3Q9UIJ7 227 aa20.94■□□□□ 0.94
CDKN2A-201ENST00000304494 TRDV1A0A1B0GX56 115 aa20.93■□□□□ 0.94
CDKN2A-201ENST00000304494 FOXI3A8MTJ6 420 aaPredicted RBP20.93■□□□□ 0.94
CDKN2A-201ENST00000304494 VEGFCP49767 419 aa20.93■□□□□ 0.94
CDKN2A-201ENST00000304494 HES5Q5TA89 166 aa20.93■□□□□ 0.94
CDKN2A-201ENST00000304494 UBE2UQ5VVX9 321 aa20.93■□□□□ 0.94
CDKN2A-201ENST00000304494 C12orf4Q9NQ89 552 aa20.93■□□□□ 0.94
CDKN2A-201ENST00000304494 ZNF736B4DX44 427 aaPredicted RBP20.92■□□□□ 0.94
CDKN2A-201ENST00000304494 PF4V1P10720 104 aa20.92■□□□□ 0.94
CDKN2A-201ENST00000304494 LSAMPQ13449 338 aa20.92■□□□□ 0.94
CDKN2A-201ENST00000304494 KHDC1LQ5JSQ8 128 aa20.92■□□□□ 0.94
CDKN2A-201ENST00000304494 C10orf99Q6UWK7 81 aa20.92■□□□□ 0.94
CDKN2A-201ENST00000304494 Q8N9W7 124 aa20.92■□□□□ 0.94
CDKN2A-201ENST00000304494 FCGR1BQ92637 280 aa20.92■□□□□ 0.94
CDKN2A-201ENST00000304494 RASL11BQ9BPW5 248 aa20.92■□□□□ 0.94
CDKN2A-201ENST00000304494 ABCG5Q9H222 651 aa20.92■□□□□ 0.94
CDKN2A-201ENST00000304494 RAB22AQ9UL26 194 aa20.92■□□□□ 0.94
CDKN2A-201ENST00000304494 G3V4G9 280 aa20.91■□□□□ 0.94
CDKN2A-201ENST00000304494 LDLRAD4O15165 306 aa20.91■□□□□ 0.94
CDKN2A-201ENST00000304494 NOTCH1P46531 2555 aa20.91■□□□□ 0.94
CDKN2A-201ENST00000304494 TMEM50BP56557 158 aa20.91■□□□□ 0.94
CDKN2A-201ENST00000304494 SLC35B1P78383 322 aa20.91■□□□□ 0.94
CDKN2A-201ENST00000304494 Q6ZPA2 131 aa20.91■□□□□ 0.94
CDKN2A-201ENST00000304494 ODF3L1Q8IXM7 274 aa20.91■□□□□ 0.94
CDKN2A-201ENST00000304494 SPARTQ8N0X7 666 aa20.91■□□□□ 0.94
CDKN2A-201ENST00000304494 ARHGAP5-AS1Q96IT6 56 aa20.91■□□□□ 0.94
CDKN2A-201ENST00000304494 S1PR3Q99500 378 aa20.91■□□□□ 0.94
CDKN2A-201ENST00000304494 PLSCR3Q9NRY6 295 aa20.91■□□□□ 0.94
CDKN2A-201ENST00000304494 IFITM5A6NNB3 132 aa20.9■□□□□ 0.94
CDKN2A-201ENST00000304494 RAB3BP20337 219 aa20.9■□□□□ 0.94
CDKN2A-201ENST00000304494 SAMD5Q5TGI4 173 aa20.9■□□□□ 0.94
CDKN2A-201ENST00000304494 ZNF833PQ6ZTB9 187 aa20.9■□□□□ 0.94
CDKN2A-201ENST00000304494 ZNF329Q86UD4 541 aa20.9■□□□□ 0.94
CDKN2A-201ENST00000304494 NOL4LQ96MY1 436 aaPredicted RBP20.9■□□□□ 0.94
CDKN2A-201ENST00000304494 HDHD3Q9BSH5 251 aaPredicted RBP20.9■□□□□ 0.94
CDKN2A-201ENST00000304494 PECRQ9BY49 303 aa20.9■□□□□ 0.94
CDKN2A-201ENST00000304494 TMEM272A0A1B0GTI8 110 aa20.89■□□□□ 0.93
CDKN2A-201ENST00000304494 PSMB9P28065 219 aa20.89■□□□□ 0.93
CDKN2A-201ENST00000304494 GPR12P47775 334 aa20.89■□□□□ 0.93
CDKN2A-201ENST00000304494 OR10A3P58181 314 aa20.89■□□□□ 0.93
CDKN2A-201ENST00000304494 HLA-DRB3P79483 266 aa20.89■□□□□ 0.93
CDKN2A-201ENST00000304494 FAM71F2Q6NXP2 309 aa20.89■□□□□ 0.93
CDKN2A-201ENST00000304494 COMMD1Q8N668 190 aa20.89■□□□□ 0.93
CDKN2A-201ENST00000304494 CMSS1Q9BQ75 279 aaKnown RBP20.89■□□□□ 0.93
CDKN2A-201ENST00000304494 GON7Q9BXV9 100 aa20.89■□□□□ 0.93
CDKN2A-201ENST00000304494 PIPOXQ9P0Z9 390 aa20.89■□□□□ 0.93
CDKN2A-201ENST00000304494 SAA2-SAA4A0A096LPE2 208 aa20.88■□□□□ 0.93
CDKN2A-201ENST00000304494 AP4M1O00189 453 aa20.88■□□□□ 0.93
CDKN2A-201ENST00000304494 SAA2P0DJI9 122 aaPredicted RBP20.88■□□□□ 0.93
CDKN2A-201ENST00000304494 BEAN1Q3B7T3 259 aa20.88■□□□□ 0.93
CDKN2A-201ENST00000304494 C22orf42Q6IC83 251 aa20.88■□□□□ 0.93
CDKN2A-201ENST00000304494 STPG2Q8N412 459 aa20.88■□□□□ 0.93
CDKN2A-201ENST00000304494 FAM71E2Q8N5Q1 922 aa20.88■□□□□ 0.93
CDKN2A-201ENST00000304494 NABP2Q9BQ15 211 aa20.88■□□□□ 0.93
CDKN2A-201ENST00000304494 MRPL20Q9BYC9 149 aaKnown RBP20.88■□□□□ 0.93
CDKN2A-201ENST00000304494 IFI27L2Q9H2X8 130 aa20.88■□□□□ 0.93
CDKN2A-201ENST00000304494 GHITMQ9H3K2 345 aa20.88■□□□□ 0.93
CDKN2A-201ENST00000304494 Q9N2K0 584 aa20.88■□□□□ 0.93
CDKN2A-201ENST00000304494 SLC23A1Q9UHI7 598 aa20.88■□□□□ 0.93
CDKN2A-201ENST00000304494 SHISA3A0PJX4 238 aa20.87■□□□□ 0.93
CDKN2A-201ENST00000304494 RAB29O14966 203 aa20.87■□□□□ 0.93
CDKN2A-201ENST00000304494 PF4P02776 101 aa20.87■□□□□ 0.93
CDKN2A-201ENST00000304494 ZBTB25P24278 435 aa20.87■□□□□ 0.93
CDKN2A-201ENST00000304494 MRPS15P82914 257 aaKnown RBP20.87■□□□□ 0.93
CDKN2A-201ENST00000304494 PLAC9Q5JTB6 97 aa20.87■□□□□ 0.93
CDKN2A-201ENST00000304494 KPRPQ5T749 579 aaPredicted RBP20.87■□□□□ 0.93
CDKN2A-201ENST00000304494 LINC00527Q9UJ94 153 aa20.87■□□□□ 0.93
CDKN2A-201ENST00000304494 ITGB1BP1O14713 200 aa20.86■□□□□ 0.93
CDKN2A-201ENST00000304494 HSPA12AO43301 675 aa20.86■□□□□ 0.93
CDKN2A-201ENST00000304494 RRP9O43818 475 aaKnown RBP20.86■□□□□ 0.93
CDKN2A-201ENST00000304494 CD33P20138 364 aa20.86■□□□□ 0.93
CDKN2A-201ENST00000304494 GADD45AP24522 165 aa20.86■□□□□ 0.93
CDKN2A-201ENST00000304494 OR3A3P47888 321 aa20.86■□□□□ 0.93
CDKN2A-201ENST00000304494 F2RL1P55085 397 aa20.86■□□□□ 0.93
CDKN2A-201ENST00000304494 EDARADDQ8WWZ3 215 aa20.86■□□□□ 0.93
CDKN2A-201ENST00000304494 RAB3CQ96E17 227 aa20.86■□□□□ 0.93
CDKN2A-201ENST00000304494 LINC01548A6NM66 108 aa20.85■□□□□ 0.93
CDKN2A-201ENST00000304494 ST8SIA5O15466 376 aa20.85■□□□□ 0.93
CDKN2A-201ENST00000304494 RAB6AP20340 208 aa20.85■□□□□ 0.93
CDKN2A-201ENST00000304494 FGF9P31371 208 aaPredicted RBP20.85■□□□□ 0.93
CDKN2A-201ENST00000304494 SOX6P35712 828 aa20.85■□□□□ 0.93
CDKN2A-201ENST00000304494 PLA2G7Q13093 441 aa20.85■□□□□ 0.93
CDKN2A-201ENST00000304494 MMDQ15546 238 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms