RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 PRR13Q9NZ81 148 aa12.08□□□□□ -0.48
TRIM23-202ENST00000274327 FXYD6-FXYD2A0A087WZ82 144 aa12.07□□□□□ -0.48
TRIM23-202ENST00000274327 NKX6-3A6NJ46 265 aa12.07□□□□□ -0.48
TRIM23-202ENST00000274327 CCSO14618 274 aa12.07□□□□□ -0.48
TRIM23-202ENST00000274327 CGB3P0DN86 165 aa12.07□□□□□ -0.48
TRIM23-202ENST00000274327 CGB7P0DN87 165 aa12.07□□□□□ -0.48
TRIM23-202ENST00000274327 GZMHP20718 246 aa12.07□□□□□ -0.48
TRIM23-202ENST00000274327 IL2RGP31785 369 aa12.07□□□□□ -0.48
TRIM23-202ENST00000274327 ZNF273Q14593 569 aa12.07□□□□□ -0.48
TRIM23-202ENST00000274327 TMEM187Q14656 261 aa12.07□□□□□ -0.48
TRIM23-202ENST00000274327 PXDC1Q5TGL8 231 aa12.07□□□□□ -0.48
TRIM23-202ENST00000274327 UQCC3Q6UW78 93 aa12.07□□□□□ -0.48
TRIM23-202ENST00000274327 OR1S1Q8NH92 325 aa12.07□□□□□ -0.48
TRIM23-202ENST00000274327 ARL11Q969Q4 196 aa12.07□□□□□ -0.48
TRIM23-202ENST00000274327 C14orf79Q96F83 325 aa12.07□□□□□ -0.48
TRIM23-202ENST00000274327 VRK1Q99986 396 aaPredicted RBP12.07□□□□□ -0.48
TRIM23-202ENST00000274327 RAB18Q9NP72 206 aa12.07□□□□□ -0.48
TRIM23-202ENST00000274327 HSPA12AO43301 675 aa12.07□□□□□ -0.48
TRIM23-202ENST00000274327 TSPAN9O75954 239 aa12.07□□□□□ -0.48
TRIM23-202ENST00000274327 SOD3P08294 240 aa12.07□□□□□ -0.48
TRIM23-202ENST00000274327 SSTR5P35346 364 aa12.07□□□□□ -0.48
TRIM23-202ENST00000274327 CEACAM6P40199 344 aa12.07□□□□□ -0.48
TRIM23-202ENST00000274327 LUMP51884 338 aaPredicted RBP12.07□□□□□ -0.48
TRIM23-202ENST00000274327 HTD2P86397 168 aa12.07□□□□□ -0.48
TRIM23-202ENST00000274327 KCNRGQ8N5I3 272 aa12.07□□□□□ -0.48
TRIM23-202ENST00000274327 SUCNR1Q9BXA5 334 aa12.07□□□□□ -0.48
TRIM23-202ENST00000274327 OR6C3Q9NZP0 311 aa12.07□□□□□ -0.48
TRIM23-202ENST00000274327 KCNIP3Q9Y2W7 256 aa12.07□□□□□ -0.48
TRIM23-202ENST00000274327 MPTX1A8MV57 137 aa12.06□□□□□ -0.48
TRIM23-202ENST00000274327 TOR1AO14656 332 aa12.06□□□□□ -0.48
TRIM23-202ENST00000274327 HSD17B6O14756 317 aa12.06□□□□□ -0.48
TRIM23-202ENST00000274327 MPPED1O15442 326 aa12.06□□□□□ -0.48
TRIM23-202ENST00000274327 SPINT2O43291 252 aa12.06□□□□□ -0.48
TRIM23-202ENST00000274327 FSTL3O95633 263 aa12.06□□□□□ -0.48
TRIM23-202ENST00000274327 OR5AC1P0C628 307 aa12.06□□□□□ -0.48
TRIM23-202ENST00000274327 ATF4P18848 351 aaPredicted RBP12.06□□□□□ -0.48
TRIM23-202ENST00000274327 EDDM3BP56851 147 aa12.06□□□□□ -0.48
TRIM23-202ENST00000274327 HFEQ30201 348 aa12.06□□□□□ -0.48
TRIM23-202ENST00000274327 ALKAL2Q6UX46 152 aa12.06□□□□□ -0.48
TRIM23-202ENST00000274327 IQCF2Q8IXL9 164 aa12.06□□□□□ -0.48
TRIM23-202ENST00000274327 LRTM2Q8N967 370 aa12.06□□□□□ -0.48
TRIM23-202ENST00000274327 OR52L2PQ8NGH6 319 aa12.06□□□□□ -0.48
TRIM23-202ENST00000274327 CXorf58Q96LI9 332 aa12.06□□□□□ -0.48
TRIM23-202ENST00000274327 PARP12Q9H0J9 701 aaKnown RBP12.06□□□□□ -0.48
TRIM23-202ENST00000274327 RAB1BQ9H0U4 201 aa12.06□□□□□ -0.48
TRIM23-202ENST00000274327 NUDT19A8MXV4 375 aa12.05□□□□□ -0.48
TRIM23-202ENST00000274327 TEX46H3BTG2 121 aa12.05□□□□□ -0.48
TRIM23-202ENST00000274327 FCN3O75636 299 aa12.05□□□□□ -0.48
TRIM23-202ENST00000274327 IGLV2-14P01704 120 aa12.05□□□□□ -0.48
TRIM23-202ENST00000274327 WNT2P09544 360 aa12.05□□□□□ -0.48
TRIM23-202ENST00000274327 COL8A2P25067 703 aa12.05□□□□□ -0.48
TRIM23-202ENST00000274327 GNMTQ14749 295 aa12.05□□□□□ -0.48
TRIM23-202ENST00000274327 TCF23Q7RTU1 214 aa12.05□□□□□ -0.48
TRIM23-202ENST00000274327 TBC1D26Q86UD7 250 aa12.05□□□□□ -0.48
TRIM23-202ENST00000274327 MSI2Q96DH6 328 aaKnown RBP12.05□□□□□ -0.48
TRIM23-202ENST00000274327 AKR1E2Q96JD6 320 aa12.05□□□□□ -0.48
TRIM23-202ENST00000274327 KAAG1Q9UBP8 84 aa12.05□□□□□ -0.48
TRIM23-202ENST00000274327 A6NNC1 897 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 F2RL2O00254 374 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 TMPRSS2O15393 492 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 ADAP1O75689 374 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 C17orf58Q2M2W7 97 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 LIAT1Q6ZQX7 453 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 GLYATL2Q8WU03 294 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 ST8SIA2Q92186 375 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 CORO2AQ92828 525 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 COMMD9Q9P000 198 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 TRAV14DV4A0A0A6YYC5 116 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 C3orf85A0A1B0GTC6 90 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 KANTRA0A1W2PQU2 76 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 TSPAN4O14817 238 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 BCL2L11O43521 198 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 NDUFA2O43678 99 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 PGLYRP1O75594 196 aaPredicted RBP12.04□□□□□ -0.48
TRIM23-202ENST00000274327 GOSR1O95249 250 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 RNF224P0DH78 156 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 SP6Q3SY56 376 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 FAM53AQ6NSI3 398 aaPredicted RBP12.04□□□□□ -0.48
TRIM23-202ENST00000274327 LYPD2Q6UXB3 125 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 MEX3BQ6ZN04 569 aaKnown RBP12.04□□□□□ -0.48
TRIM23-202ENST00000274327 ZNF546Q86UE3 836 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 CMTM1Q8IZ96 169 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 FGFRL1Q8N441 504 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 RFESDQ8TAC1 157 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 PCNPQ8WW12 178 aaKnown RBP12.04□□□□□ -0.48
TRIM23-202ENST00000274327 NEU4Q8WWR8 484 aaPredicted RBP12.04□□□□□ -0.48
TRIM23-202ENST00000274327 SEC22AQ96IW7 307 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 TP53RKQ96S44 253 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 OR2S2Q9NQN1 319 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 CALYQ9NYX4 217 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 SLC25A10Q9UBX3 287 aaPredicted RBP12.04□□□□□ -0.48
TRIM23-202ENST00000274327 JPT1Q9UK76 154 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 TNFSF18Q9UNG2 199 aa12.04□□□□□ -0.48
TRIM23-202ENST00000274327 MEX3AA1L020 520 aaKnown RBP12.03□□□□□ -0.48
TRIM23-202ENST00000274327 RAB19A4D1S5 217 aa12.03□□□□□ -0.48
TRIM23-202ENST00000274327 LYNX1G3V0Z9 82 aa12.03□□□□□ -0.48
TRIM23-202ENST00000274327 PHF1O43189 567 aaPredicted RBP12.03□□□□□ -0.48
TRIM23-202ENST00000274327 OR8U9P0C7N5 309 aa12.03□□□□□ -0.48
TRIM23-202ENST00000274327 LYNX1P0DP58 116 aa12.03□□□□□ -0.48
TRIM23-202ENST00000274327 MRPS11P82912 194 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms