RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Hoxc11P31313 304 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Defa6P50704 93 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 MybphlQ5FW53 355 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr1042Q7TR81 313 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 LssQ8BLN5 733 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Cst6Q9D1B1 149 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Elovl1Q9JLJ5 279 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Gm28557A0A087WQQ0 336 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Fnd3c2A2AP83 941 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 9130019O22RikG3X941 543 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Hoxd9P28357 339 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 FblP35550 327 aaKnown RBP10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Gcnt2P97402 401 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Crb2Q80YA8 1282 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr344Q8VFP9 309 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Nmnat3Q99JR6 245 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Tubd1Q9R1K7 455 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr122W4VSP0 330 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr143P34985 313 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Slc38a11Q3USY0 453 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Bahd1Q497V6 772 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Fbxo4Q8CHQ0 385 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 MmachcQ9CZD0 279 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Shank1D3YZU1 2167 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Ube2dnl1A2AFH1 155 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Skint9A7TZG3 319 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Vmn1r138D3YTY2 306 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Gm8693E9PW18 306 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Gm4498K9J7G4 306 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Vmn1r118L7N273 306 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Itln1O88310 313 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 SrgnP13609 152 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 CtszQ9WUU7 306 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 NrapQ80XB4 1728 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Hoxa4P06798 285 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Fam187bQ0VAY3 358 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 A4gntQ14BT6 341 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Dact2Q7TN08 757 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 AjubaQ91XC0 547 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Slc50a1Q9CXK4 221 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Tmem235B1AQL3 211 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Irs1P35569 1233 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 RimklaQ6PFX8 380 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr129Q8VEY1 330 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr480Q8VEZ0 312 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Greb1lB9EJV3 1913 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr1349Q7TQV1 317 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Vmn1r36Q8R2E3 305 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Aurkaip1Q9DCJ7 200 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Esp38A8R0X1 80 aa10.71□□□□□ -0.69
Trim56-201ENSMUST00000054384 Col9a2Q07643 688 aa10.71□□□□□ -0.69
Trim56-201ENSMUST00000054384 Cfhr1Q61406 343 aa10.71□□□□□ -0.69
Trim56-201ENSMUST00000054384 Npepl1Q6NSR8 524 aa10.71□□□□□ -0.69
Trim56-201ENSMUST00000054384 Zfp52Q8BJ45 724 aa10.71□□□□□ -0.69
Trim56-201ENSMUST00000054384 Map1lc3bQ9CQV6 125 aa10.71□□□□□ -0.69
Trim56-201ENSMUST00000054384 PhipQ8VDD9 1821 aaKnown RBP10.71□□□□□ -0.69
Trim56-201ENSMUST00000054384 A0A286YD13 301 aa10.71□□□□□ -0.69
Trim56-201ENSMUST00000054384 Defa35E9QLQ1 93 aa10.71□□□□□ -0.69
Trim56-201ENSMUST00000054384 F2rl1P55086 399 aa10.71□□□□□ -0.69
Trim56-201ENSMUST00000054384 March5Q3KNM2 278 aa10.71□□□□□ -0.69
Trim56-201ENSMUST00000054384 Slc22a13Q6A4L0 551 aa10.71□□□□□ -0.69
Trim56-201ENSMUST00000054384 Ube3dQ8BX13 368 aa10.71□□□□□ -0.69
Trim56-201ENSMUST00000054384 Sult2a2P50236 285 aa10.71□□□□□ -0.69
Trim56-201ENSMUST00000054384 Slc25a31Q3V132 320 aa10.71□□□□□ -0.69
Trim56-201ENSMUST00000054384 Gramd2bQ6PEM6 445 aa10.71□□□□□ -0.69
Trim56-201ENSMUST00000054384 Tmem215A7E1Z1 235 aa10.71□□□□□ -0.69
Trim56-201ENSMUST00000054384 Wdfy1E9Q4P1 410 aa10.71□□□□□ -0.69
Trim56-201ENSMUST00000054384 Cln5Q3UMW8 341 aa10.71□□□□□ -0.69
Trim56-201ENSMUST00000054384 Scgb2b24Q7M747 112 aa10.71□□□□□ -0.69
Trim56-201ENSMUST00000054384 ArsjQ8BM89 598 aa10.71□□□□□ -0.69
Trim56-201ENSMUST00000054384 Lsm11Q8BUV6 361 aa10.71□□□□□ -0.69
Trim56-201ENSMUST00000054384 Gm45800A0A1B0GT24 152 aa10.71□□□□□ -0.7
Trim56-201ENSMUST00000054384 Ier2P17950 221 aa10.71□□□□□ -0.7
Trim56-201ENSMUST00000054384 F13bQ07968 669 aa10.71□□□□□ -0.7
Trim56-201ENSMUST00000054384 Nit1Q8VDK1 323 aa10.71□□□□□ -0.7
Trim56-201ENSMUST00000054384 Ube2fQ9CY34 185 aa10.71□□□□□ -0.7
Trim56-201ENSMUST00000054384 Plekha3Q9ERS4 297 aa10.71□□□□□ -0.7
Trim56-201ENSMUST00000054384 Scgb1b12A0A087WP21 93 aa10.71□□□□□ -0.7
Trim56-201ENSMUST00000054384 FahP35505 419 aa10.71□□□□□ -0.7
Trim56-201ENSMUST00000054384 Fmo1P50285 532 aa10.71□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr1427Q8VFU9 311 aa10.71□□□□□ -0.7
Trim56-201ENSMUST00000054384 Fbxw4Q9JMJ2 410 aa10.71□□□□□ -0.7
Trim56-201ENSMUST00000054384 Arxes1C0HK79 180 aa10.71□□□□□ -0.7
Trim56-201ENSMUST00000054384 Arxes2C0HK80 180 aa10.71□□□□□ -0.7
Trim56-201ENSMUST00000054384 Ctf2P83714 204 aa10.71□□□□□ -0.7
Trim56-201ENSMUST00000054384 Cited1P97769 203 aa10.71□□□□□ -0.7
Trim56-201ENSMUST00000054384 SrstQ06666 185 aa10.71□□□□□ -0.7
Trim56-201ENSMUST00000054384 D17Wsu92eQ3TT38 291 aa10.71□□□□□ -0.7
Trim56-201ENSMUST00000054384 Gm9938Q8C3P5 112 aa10.71□□□□□ -0.7
Trim56-201ENSMUST00000054384 Tmem51Q99LG1 249 aa10.71□□□□□ -0.7
Trim56-201ENSMUST00000054384 Rnf2Q9CQJ4 336 aa10.71□□□□□ -0.7
Trim56-201ENSMUST00000054384 Lysmd2Q9D7V2 215 aa10.71□□□□□ -0.7
Trim56-201ENSMUST00000054384 Aph1cQ9DCZ9 258 aa10.71□□□□□ -0.7
Trim56-201ENSMUST00000054384 Dock6Q8VDR9 2080 aa10.71□□□□□ -0.7
Trim56-201ENSMUST00000054384 Plxna1P70206 1894 aa10.71□□□□□ -0.7
Trim56-201ENSMUST00000054384 Best1O88870 551 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Zfp59P16373 634 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Etv2P41163 335 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Thbs3Q05895 956 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 C1rlQ3UZ09 482 aa10.7□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 272.1 ms