RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 GVQW1Q8N7I0 195 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 HSPB9Q9BQS6 159 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 GNG12Q9UBI6 72 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 SLC23A1Q9UHI7 598 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 DNAH3Q8TD57 4116 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 IGHV1-3A0A0C4DH29 117 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 TOR1AO14656 332 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 TSPAN9O75954 239 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 GSTT2P0CG29 244 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 GSTT2BP0CG30 244 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 TAGLNQ01995 201 aaKnown RBP4.53□□□□□ -1.68
CPNE3-208ENST00000614678 NSUN5P1Q3KNT7 163 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 MOB3BQ86TA1 216 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 FAM89BQ8N5H3 189 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 TSPAN14Q8NG11 270 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 OR6M1Q8NGM8 313 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 OR10X1Q8NGY0 326 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 OR9G1Q8NH87 305 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 SLC25A38Q96DW6 304 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 CITED2Q99967 270 aaPredicted RBP4.53□□□□□ -1.68
CPNE3-208ENST00000614678 TM2D1Q9BX74 207 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 LINC00574Q9H8X3 128 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 SEBOXQ9HB31 216 aaPredicted RBP4.53□□□□□ -1.68
CPNE3-208ENST00000614678 ISYNA1Q9NPH2 558 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 MBNL3Q9NUK0 354 aaKnown RBP4.53□□□□□ -1.68
CPNE3-208ENST00000614678 STEAP1Q9UHE8 339 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 SAA2-SAA4A0A096LPE2 208 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 TMEM235A6NFC5 223 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 ADARB2-AS1A8MUL3 147 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 HSD17B6O14756 317 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 ZNF780AO75290 641 aaPredicted RBP4.52□□□□□ -1.69
CPNE3-208ENST00000614678 SAA2P0DJI9 122 aaPredicted RBP4.52□□□□□ -1.69
CPNE3-208ENST00000614678 SCGB2A2Q13296 93 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 TOMM40LQ969M1 308 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 RPEQ96AT9 228 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 OCSTAMPQ9BR26 566 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 SLC25A33Q9BSK2 321 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 MRPL20Q9BYC9 149 aaKnown RBP4.52□□□□□ -1.69
CPNE3-208ENST00000614678 STUB1Q9UNE7 303 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 hCG_1809904A0A1W2PP81 198 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 A0A1W2PPE2 198 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 A0A1W2PPH5 198 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 A0A1W2PR64 198 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 A0A1W2PRV1 198 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 CD34P28906 385 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 BPIFB3P59826 476 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 DEFA5Q01523 94 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 Q6ZTK2 550 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 KCNG3Q8TAE7 436 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 PHYHIPQ92561 330 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 NEDD4LQ96PU5 975 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 ZNF251Q9BRH9 671 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 CST11Q9H112 138 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 IFI27L2Q9H2X8 130 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 CHMP1AQ9HD42 196 aaPredicted RBP4.52□□□□□ -1.69
CPNE3-208ENST00000614678 A0A1B0GVG6 124 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 LEUTXA8MZ59 168 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 SSX5O60225 188 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 BPNT1O95861 308 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 RBP4P02753 201 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 IDNKQ5T6J7 187 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 SFXN4Q6P4A7 337 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 TEX29Q8N6K0 151 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 OR4F5Q8NH21 305 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 RTN4IP1Q8WWV3 396 aaPredicted RBP4.52□□□□□ -1.69
CPNE3-208ENST00000614678 YIPF6Q96EC8 236 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 AGMATQ9BSE5 352 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 ATG5Q9H1Y0 275 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 BEX1Q9HBH7 125 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 TPSG1Q9NRR2 321 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 PLSCR3Q9NRY6 295 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 TBL2Q9Y4P3 447 aaKnown RBP4.52□□□□□ -1.69
CPNE3-208ENST00000614678 CSMD3Q7Z407 3707 aa4.52□□□□□ -1.69
CPNE3-208ENST00000614678 BET1O15155 118 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 ARL6IP5O75915 188 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 IGKV1-16P04430 117 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 PSMA1P25786 263 aaKnown RBP4.51□□□□□ -1.69
CPNE3-208ENST00000614678 SLC16A12Q6ZSM3 486 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 SLC25A48Q6ZT89 311 aaKnown RBP4.51□□□□□ -1.69
CPNE3-208ENST00000614678 EAF1Q96JC9 268 aaPredicted RBP4.51□□□□□ -1.69
CPNE3-208ENST00000614678 FUNDC2Q9BWH2 189 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 SPATA2Q9UM82 520 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 FBXO7Q9Y3I1 522 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 BTBD17A6NE02 478 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 MFNGO00587 321 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 FCN1O00602 326 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 NDUFA7O95182 113 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 PAX5Q02548 391 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 HMGN3Q15651 99 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 TMEM86BQ8N661 226 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 RHOFQ9HBH0 211 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 ABCB10Q9NRK6 738 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 TRAV1-2A0A0B4J238 106 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 NCBP2LA6PVI3 153 aaKnown RBP4.51□□□□□ -1.69
CPNE3-208ENST00000614678 APELAP0DMC3 54 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 GZMHP20718 246 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 CEACAM6P40199 344 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 NDPQ00604 133 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 GPR176Q14439 515 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 KCTD21Q4G0X4 260 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms