RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 ZNF181Q2M3W8 571 aa0.74□□□□□ -2.29
TOP2A-202ENST00000577541 TMEM249Q2WGJ8 235 aa0.74□□□□□ -2.29
TOP2A-202ENST00000577541 LGALSLQ3ZCW2 172 aaPredicted RBP0.74□□□□□ -2.29
TOP2A-202ENST00000577541 TRMT12Q53H54 448 aaKnown RBP0.74□□□□□ -2.29
TOP2A-202ENST00000577541 CENPWQ5EE01 88 aa0.74□□□□□ -2.29
TOP2A-202ENST00000577541 PAGE2Q7Z2X7 111 aa0.74□□□□□ -2.29
TOP2A-202ENST00000577541 PACRGLQ8N7B6 248 aa0.74□□□□□ -2.29
TOP2A-202ENST00000577541 FER1L6-AS1Q8NA97 138 aa0.74□□□□□ -2.29
TOP2A-202ENST00000577541 DNAJB3Q8WWF6 145 aa0.74□□□□□ -2.29
TOP2A-202ENST00000577541 TAMM41Q96BW9 452 aa0.74□□□□□ -2.29
TOP2A-202ENST00000577541 PPCDCQ96CD2 204 aa0.74□□□□□ -2.29
TOP2A-202ENST00000577541 PYURFQ96I23 114 aa0.74□□□□□ -2.29
TOP2A-202ENST00000577541 C20orf166-AS1Q96NR2 134 aa0.74□□□□□ -2.29
TOP2A-202ENST00000577541 MED10Q9BTT4 135 aa0.74□□□□□ -2.29
TOP2A-202ENST00000577541 TSGA10Q9BZW7 698 aa0.74□□□□□ -2.29
TOP2A-202ENST00000577541 C11orf49Q9H6J7 331 aa0.74□□□□□ -2.29
TOP2A-202ENST00000577541 WDR54Q9H977 334 aa0.74□□□□□ -2.29
TOP2A-202ENST00000577541 AMMECR1Q9Y4X0 333 aaPredicted RBP0.74□□□□□ -2.29
TOP2A-202ENST00000577541 HSPE1-MOB4S4R3N1 261 aa0.74□□□□□ -2.29
TOP2A-202ENST00000577541 PIK3R4Q99570 1358 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 MAP3K19Q56UN5 1328 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 IGHV3OR15-7A0A075B7D8 119 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 LOC102725191A0A1B0GVB3 256 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 TINCRA0A1B0GVN0 87 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 ERICH2A1L162 156 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 METTL15A6NJ78 407 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 AZIN1O14977 448 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 CYTH3O43739 400 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 SLC25A20O43772 301 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 OR13C7P0DN81 318 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 CTSEP14091 401 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 GADD45AP24522 165 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 PSMB9P28065 219 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 CASQ1P31415 396 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 ACTR1BP42025 376 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 HSPA13P48723 471 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 PSMB3P49720 205 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 ACTBP60709 375 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 ACTG1P63261 375 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 BIKQ13323 160 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 EXOC3L4Q17RC7 722 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 RBM48Q5RL73 367 aaKnown RBP0.73□□□□□ -2.29
TOP2A-202ENST00000577541 SAPCD1Q5SSQ6 148 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 HENMT1Q5T8I9 393 aaKnown RBP0.73□□□□□ -2.29
TOP2A-202ENST00000577541 SDIM1Q6ZPB5 146 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 TCF24Q7RTU0 167 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 NIT1Q86X76 327 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 BPIFB6Q8NFQ5 453 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 OR7G1Q8NGA0 311 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 OR10P1Q8NGE3 313 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 OR2V1Q8NHB1 315 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 SPPL2BQ8TCT7 592 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 SLC37A2Q8TED4 501 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 CASTOR1Q8WTX7 329 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 HIST1H2BAQ96A08 127 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 ATP6V1G3Q96LB4 118 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 GNB1LQ9BYB4 327 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 ABCG5Q9H222 651 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 C1orf109Q9NX04 203 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 GMEB1Q9Y692 573 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 MINOS1-NBL1R4GNA1 71 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 ATAD5Q96QE3 1844 aa0.73□□□□□ -2.29
TOP2A-202ENST00000577541 RIMS2Q9UQ26 1411 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 COL5A3P25940 1745 aaPredicted RBP0.72□□□□□ -2.29
TOP2A-202ENST00000577541 RAD50Q92878 1312 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 USP42Q9H9J4 1324 aaKnown RBP0.72□□□□□ -2.29
TOP2A-202ENST00000577541 EIF4G1Q04637 1599 aaKnown RBP0.72□□□□□ -2.29
TOP2A-202ENST00000577541 ODF3BA8MYP8 253 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 B4DEV8 164 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 F5H768 121 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 K7EQS6 105 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 TOX3O15405 576 aaPredicted RBP0.72□□□□□ -2.29
TOP2A-202ENST00000577541 ATP8B1O43520 1251 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 ATP6V1G2O95670 118 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 CDS2O95674 445 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 ORM1P02763 201 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 PRB1P04280 392 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 ATP5G1P05496 136 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 PSKH1P11801 424 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 PSMA1P25786 263 aaKnown RBP0.72□□□□□ -2.29
TOP2A-202ENST00000577541 CRYBB3P26998 211 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 ELK4P28324 431 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 CRATP43155 626 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 CBX5P45973 191 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 CDK9P50750 372 aaKnown RBP0.72□□□□□ -2.29
TOP2A-202ENST00000577541 RAB8AP61006 207 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 TMEM267Q0VDI3 215 aaPredicted RBP0.72□□□□□ -2.29
TOP2A-202ENST00000577541 HTR4Q13639 388 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 ANGPT1Q15389 498 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 TPRXLQ17RH7 258 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 HLA-DRB5Q30154 266 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 CLEC6AQ6EIG7 209 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 ATP5L2Q7Z4Y8 100 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 MTERF4Q7Z6M4 381 aaKnown RBP0.72□□□□□ -2.29
TOP2A-202ENST00000577541 CRLF3Q8IUI8 442 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 C1orf174Q8IYL3 243 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 TMEM156Q8N614 296 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 OR4P4Q8NGL7 312 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 MFSD8Q8NHS3 518 aa0.72□□□□□ -2.29
TOP2A-202ENST00000577541 CCDC12Q8WUD4 166 aaPredicted RBP0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms