RNA–Protein interactions for RNA: ENST00000570270.1

TAF1C-223, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit C, human

TSL 3

Gene TAF1C, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1C-223	ENST00000570270	CD1B	P29016	333 aa		10.94	□□□□□ -0.66
TAF1C-223	ENST00000570270	RPS27A	P62979	156 aa	Known RBP	10.94	□□□□□ -0.66
TAF1C-223	ENST00000570270	HTD2	P86397	168 aa		10.94	□□□□□ -0.66
TAF1C-223	ENST00000570270	C22orf42	Q6IC83	251 aa		10.94	□□□□□ -0.66
TAF1C-223	ENST00000570270	LRRTM1	Q86UE6	522 aa		10.94	□□□□□ -0.66
TAF1C-223	ENST00000570270	TMEM104	Q8NE00	496 aa		10.94	□□□□□ -0.66
TAF1C-223	ENST00000570270	OR8H1	Q8NGG4	311 aa		10.94	□□□□□ -0.66
TAF1C-223	ENST00000570270	FAM46B	Q96A09	425 aa		10.94	□□□□□ -0.66
TAF1C-223	ENST00000570270	R3HDM4	Q96D70	268 aa		10.94	□□□□□ -0.66
TAF1C-223	ENST00000570270	OR51E2	Q9H255	320 aa		10.94	□□□□□ -0.66
TAF1C-223	ENST00000570270	TSSC4	Q9Y5U2	329 aa	Predicted RBP	10.94	□□□□□ -0.66
TAF1C-223	ENST00000570270	NOTCH1	P46531	2555 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	IGHV1-3	A0A0C4DH29	117 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	SLC22A1	O15245	554 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	IGKV1D-33	P01593	117 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	IGKV1-33	P01594	117 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	VSIG8	P0DPA2	414 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	ARSB	P15848	533 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	GAL	P22466	123 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	LOXL3	P58215	753 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	SLC35B1	P78383	322 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	EBI3	Q14213	229 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	TIMM50	Q3ZCQ8	353 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	NKAPL	Q5M9Q1	402 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	CD200R1L	Q6Q8B3	271 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	SLC25A48	Q6ZT89	311 aa	Known RBP	10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	MOB1B	Q7L9L4	216 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	OR2W3	Q7Z3T1	314 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	TGIF2LX	Q8IUE1	241 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	FOXRED2	Q8IWF2	684 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	IZUMO1	Q8IYV9	350 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	PRR18	Q8N4B5	295 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	WIPF2	Q8TF74	440 aa	Predicted RBP	10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	CHPT1	Q8WUD6	406 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	GALM	Q96C23	342 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	CITED2	Q99967	270 aa	Predicted RBP	10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	TM2D1	Q9BX74	207 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	GON7	Q9BXV9	100 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	TAF9B	Q9HBM6	251 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	OR2S2	Q9NQN1	319 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	MBNL3	Q9NUK0	354 aa	Known RBP	10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	PLEKHJ1	Q9NW61	149 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	TXNL4B	Q9NX01	149 aa	Known RBP	10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	ZNF581	Q9P0T4	197 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	SCOC	Q9UIL1	159 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	JPT1	Q9UK76	154 aa		10.93	□□□□□ -0.66
TAF1C-223	ENST00000570270	IGHV3-43	A0A0B4J1X8	118 aa		10.92	□□□□□ -0.66
TAF1C-223	ENST00000570270		A0A1W2PPE3	182 aa		10.92	□□□□□ -0.66
TAF1C-223	ENST00000570270	TCRBV4S1A1T	A0A5B7	111 aa		10.92	□□□□□ -0.66
TAF1C-223	ENST00000570270	SLC17A2	O00624	439 aa		10.92	□□□□□ -0.66
TAF1C-223	ENST00000570270	PDCD5	O14737	125 aa		10.92	□□□□□ -0.66
TAF1C-223	ENST00000570270	WIPF1	O43516	503 aa		10.92	□□□□□ -0.66
TAF1C-223	ENST00000570270	IGHV3-43D	P0DP04	118 aa		10.92	□□□□□ -0.66
TAF1C-223	ENST00000570270	PF4V1	P10720	104 aa		10.92	□□□□□ -0.66
TAF1C-223	ENST00000570270	CD37	P11049	281 aa		10.92	□□□□□ -0.66
TAF1C-223	ENST00000570270	ZNF137P	P52743	207 aa		10.92	□□□□□ -0.66
TAF1C-223	ENST00000570270	CD83	Q01151	205 aa		10.92	□□□□□ -0.66
TAF1C-223	ENST00000570270	PDLIM3	Q53GG5	364 aa	Predicted RBP	10.92	□□□□□ -0.66
TAF1C-223	ENST00000570270	LY6G6F	Q5SQ64	297 aa		10.92	□□□□□ -0.66
TAF1C-223	ENST00000570270	GPR141	Q7Z602	305 aa		10.92	□□□□□ -0.66
TAF1C-223	ENST00000570270	COMMD1	Q8N668	190 aa		10.92	□□□□□ -0.66
TAF1C-223	ENST00000570270	OR13F1	Q8NGS4	319 aa		10.92	□□□□□ -0.66
TAF1C-223	ENST00000570270	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	10.92	□□□□□ -0.66
TAF1C-223	ENST00000570270	YIPF6	Q96EC8	236 aa		10.92	□□□□□ -0.66
TAF1C-223	ENST00000570270	GHITM	Q9H3K2	345 aa		10.92	□□□□□ -0.66
TAF1C-223	ENST00000570270	CHMP1A	Q9HD42	196 aa	Predicted RBP	10.92	□□□□□ -0.66
TAF1C-223	ENST00000570270	STEAP1	Q9UHE8	339 aa		10.92	□□□□□ -0.66
TAF1C-223	ENST00000570270	NCBP2L	A6PVI3	153 aa	Known RBP	10.91	□□□□□ -0.66
TAF1C-223	ENST00000570270	TMEM14DP	A8MWL7	114 aa		10.91	□□□□□ -0.66
TAF1C-223	ENST00000570270	KCNAB3	O43448	404 aa		10.91	□□□□□ -0.66
TAF1C-223	ENST00000570270	AIRE	O43918	545 aa		10.91	□□□□□ -0.66
TAF1C-223	ENST00000570270	YPEL1	O60688	119 aa		10.91	□□□□□ -0.66
TAF1C-223	ENST00000570270	MOS	P00540	346 aa		10.91	□□□□□ -0.66
TAF1C-223	ENST00000570270	RCC1	P18754	421 aa	Predicted RBP	10.91	□□□□□ -0.66
TAF1C-223	ENST00000570270	CHAT	P28329	748 aa		10.91	□□□□□ -0.66
TAF1C-223	ENST00000570270	BLVRB	P30043	206 aa	Predicted RBP	10.91	□□□□□ -0.66
TAF1C-223	ENST00000570270	FGF9	P31371	208 aa	Predicted RBP	10.91	□□□□□ -0.66
TAF1C-223	ENST00000570270	HNF4G	Q14541	408 aa		10.91	□□□□□ -0.66
TAF1C-223	ENST00000570270	RAB11B	Q15907	218 aa		10.91	□□□□□ -0.66
TAF1C-223	ENST00000570270	SIGIRR	Q6IA17	410 aa		10.91	□□□□□ -0.66
TAF1C-223	ENST00000570270		Q6ZS46	218 aa		10.91	□□□□□ -0.66
TAF1C-223	ENST00000570270	C5orf56	Q8N8D9	126 aa		10.91	□□□□□ -0.66
TAF1C-223	ENST00000570270	OR1L1	Q8NH94	360 aa		10.91	□□□□□ -0.66
TAF1C-223	ENST00000570270	MRPL30	Q8TCC3	161 aa	Known RBP	10.91	□□□□□ -0.66
TAF1C-223	ENST00000570270	YPEL2	Q96QA6	119 aa		10.91	□□□□□ -0.66
TAF1C-223	ENST00000570270	RASL11B	Q9BPW5	248 aa		10.91	□□□□□ -0.66
TAF1C-223	ENST00000570270	FUNDC2	Q9BWH2	189 aa		10.91	□□□□□ -0.66
TAF1C-223	ENST00000570270	AK6	Q9Y3D8	172 aa	Known RBP	10.91	□□□□□ -0.66
TAF1C-223	ENST00000570270	VWF	P04275	2813 aa		10.91	□□□□□ -0.66
TAF1C-223	ENST00000570270	NOTCH3	Q9UM47	2321 aa		10.9	□□□□□ -0.66
TAF1C-223	ENST00000570270	CMYA5	Q8N3K9	4069 aa		10.9	□□□□□ -0.66
TAF1C-223	ENST00000570270	PSMB11	A5LHX3	300 aa		10.9	□□□□□ -0.66
TAF1C-223	ENST00000570270	SERPINE3	A8MV23	424 aa		10.9	□□□□□ -0.66
TAF1C-223	ENST00000570270	LANCL1	O43813	399 aa		10.9	□□□□□ -0.66
TAF1C-223	ENST00000570270	PF4	P02776	101 aa		10.9	□□□□□ -0.66
TAF1C-223	ENST00000570270	TFAP2A	P05549	437 aa		10.9	□□□□□ -0.66
TAF1C-223	ENST00000570270	SLC6A1	P30531	599 aa		10.9	□□□□□ -0.66
TAF1C-223	ENST00000570270	ALDH3B2	P48448	385 aa		10.9	□□□□□ -0.66
TAF1C-223	ENST00000570270	LSM3	P62310	102 aa	Known RBP	10.9	□□□□□ -0.66
TAF1C-223	ENST00000570270	MRPS15	P82914	257 aa	Known RBP	10.9	□□□□□ -0.66

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms