RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 PTX4Q96A99 478 aa11.04□□□□□ -0.64
CHRNB4-204ENST00000559849 MMP28Q9H239 520 aa11.04□□□□□ -0.64
CHRNB4-204ENST00000559849 RIMS4Q9H426 269 aaPredicted RBP11.04□□□□□ -0.64
CHRNB4-204ENST00000559849 RNF167Q9H6Y7 350 aa11.04□□□□□ -0.64
CHRNB4-204ENST00000559849 ANKRD34BA5PLL1 514 aa11.04□□□□□ -0.64
CHRNB4-204ENST00000559849 FOXI3A8MTJ6 420 aaPredicted RBP11.04□□□□□ -0.64
CHRNB4-204ENST00000559849 SDCBPO00560 298 aaPredicted RBP11.04□□□□□ -0.64
CHRNB4-204ENST00000559849 IGHV3-7P01780 117 aa11.04□□□□□ -0.64
CHRNB4-204ENST00000559849 RAB6AP20340 208 aa11.04□□□□□ -0.64
CHRNB4-204ENST00000559849 RAB13P51153 203 aa11.04□□□□□ -0.64
CHRNB4-204ENST00000559849 DYNLT3P51808 116 aa11.04□□□□□ -0.64
CHRNB4-204ENST00000559849 LOXL3P58215 753 aa11.04□□□□□ -0.64
CHRNB4-204ENST00000559849 PLA1AQ53H76 456 aa11.04□□□□□ -0.64
CHRNB4-204ENST00000559849 AWAT1Q58HT5 328 aa11.04□□□□□ -0.64
CHRNB4-204ENST00000559849 LEAP2Q969E1 77 aa11.04□□□□□ -0.64
CHRNB4-204ENST00000559849 CYYR1Q96J86 154 aa11.04□□□□□ -0.64
CHRNB4-204ENST00000559849 TAF9BQ9HBM6 251 aa11.04□□□□□ -0.64
CHRNB4-204ENST00000559849 C1RLQ9NZP8 487 aa11.04□□□□□ -0.64
CHRNB4-204ENST00000559849 AMMECR1Q9Y4X0 333 aaPredicted RBP11.04□□□□□ -0.64
CHRNB4-204ENST00000559849 SMIM30A4D0T7 59 aa11.03□□□□□ -0.64
CHRNB4-204ENST00000559849 METTL21EPA6NDL7 271 aa11.03□□□□□ -0.64
CHRNB4-204ENST00000559849 HBZP02008 142 aa11.03□□□□□ -0.64
CHRNB4-204ENST00000559849 SLC2A2P11168 524 aaPredicted RBP11.03□□□□□ -0.64
CHRNB4-204ENST00000559849 ARHGDIBP52566 201 aa11.03□□□□□ -0.64
CHRNB4-204ENST00000559849 LY6EQ16553 131 aa11.03□□□□□ -0.64
CHRNB4-204ENST00000559849 TMEM30BQ3MIR4 351 aa11.03□□□□□ -0.64
CHRNB4-204ENST00000559849 PRR18Q8N4B5 295 aa11.03□□□□□ -0.64
CHRNB4-204ENST00000559849 OR4F5Q8NH21 305 aa11.03□□□□□ -0.64
CHRNB4-204ENST00000559849 UBALD1Q8TB05 177 aa11.03□□□□□ -0.64
CHRNB4-204ENST00000559849 TAF15Q92804 592 aaKnown RBP eCLIP11.03□□□□□ -0.64
CHRNB4-204ENST00000559849 ARHGAP5-AS1Q96IT6 56 aa11.03□□□□□ -0.64
CHRNB4-204ENST00000559849 RAB18Q9NP72 206 aa11.03□□□□□ -0.64
CHRNB4-204ENST00000559849 GFOD1Q9NXC2 390 aa11.03□□□□□ -0.64
CHRNB4-204ENST00000559849 RABL2BQ9UNT1 228 aa11.03□□□□□ -0.64
CHRNB4-204ENST00000559849 A0A1B0GUS0 222 aa11.02□□□□□ -0.64
CHRNB4-204ENST00000559849 LY6LH3BQJ8 138 aa11.02□□□□□ -0.64
CHRNB4-204ENST00000559849 NDUFA7O95182 113 aa11.02□□□□□ -0.64
CHRNB4-204ENST00000559849 NAPSAO96009 420 aa11.02□□□□□ -0.64
CHRNB4-204ENST00000559849 SERPINB10P48595 397 aa11.02□□□□□ -0.64
CHRNB4-204ENST00000559849 EFNB2P52799 333 aa11.02□□□□□ -0.64
CHRNB4-204ENST00000559849 RELBQ01201 579 aa11.02□□□□□ -0.64
CHRNB4-204ENST00000559849 MXD1Q05195 221 aa11.02□□□□□ -0.64
CHRNB4-204ENST00000559849 PLA2G7Q13093 441 aa11.02□□□□□ -0.64
CHRNB4-204ENST00000559849 ZNF846Q147U1 533 aa11.02□□□□□ -0.64
CHRNB4-204ENST00000559849 Q3ZCU0 254 aa11.02□□□□□ -0.64
CHRNB4-204ENST00000559849 SFXN4Q6P4A7 337 aa11.02□□□□□ -0.64
CHRNB4-204ENST00000559849 LIAT1Q6ZQX7 453 aa11.02□□□□□ -0.64
CHRNB4-204ENST00000559849 C3orf56Q8N813 242 aa11.02□□□□□ -0.64
CHRNB4-204ENST00000559849 C8orf31Q8N9H6 132 aa11.02□□□□□ -0.64
CHRNB4-204ENST00000559849 BEX1Q9HBH7 125 aa11.02□□□□□ -0.64
CHRNB4-204ENST00000559849 CHMP1AQ9HD42 196 aaPredicted RBP11.02□□□□□ -0.64
CHRNB4-204ENST00000559849 DAPK2Q9UIK4 370 aa11.02□□□□□ -0.64
CHRNB4-204ENST00000559849 PITPNC1Q9UKF7 332 aa11.02□□□□□ -0.64
CHRNB4-204ENST00000559849 A0A0B4J203 849 aa11.02□□□□□ -0.65
CHRNB4-204ENST00000559849 POM121CA8CG34 1229 aa11.02□□□□□ -0.65
CHRNB4-204ENST00000559849 OOSP1A8MZH6 123 aa11.02□□□□□ -0.65
CHRNB4-204ENST00000559849 BRS3P32247 399 aa11.02□□□□□ -0.65
CHRNB4-204ENST00000559849 GNG10P50151 68 aa11.02□□□□□ -0.65
CHRNB4-204ENST00000559849 RAG2P55895 527 aa11.02□□□□□ -0.65
CHRNB4-204ENST00000559849 TRIM16LQ309B1 348 aa11.02□□□□□ -0.65
CHRNB4-204ENST00000559849 TPTE2P1Q5T6R2 138 aa11.02□□□□□ -0.65
CHRNB4-204ENST00000559849 DHRS7BQ6IAN0 325 aaPredicted RBP11.02□□□□□ -0.65
CHRNB4-204ENST00000559849 CCDC144NLQ6NUI1 221 aa11.02□□□□□ -0.65
CHRNB4-204ENST00000559849 OR10X1Q8NGY0 326 aa11.02□□□□□ -0.65
CHRNB4-204ENST00000559849 PECRQ9BY49 303 aa11.02□□□□□ -0.65
CHRNB4-204ENST00000559849 WDR12Q9GZL7 423 aaKnown RBP11.02□□□□□ -0.65
CHRNB4-204ENST00000559849 GNG12Q9UBI6 72 aa11.02□□□□□ -0.65
CHRNB4-204ENST00000559849 AK3Q9UIJ7 227 aa11.02□□□□□ -0.65
CHRNB4-204ENST00000559849 TCF19Q9Y242 345 aa11.02□□□□□ -0.65
CHRNB4-204ENST00000559849 MMP24Q9Y5R2 645 aa11.02□□□□□ -0.65
CHRNB4-204ENST00000559849 ANK2Q01484 3957 aa11.01□□□□□ -0.65
CHRNB4-204ENST00000559849 IGHV3-43A0A0B4J1X8 118 aa11.01□□□□□ -0.65
CHRNB4-204ENST00000559849 IGHV3-43DP0DP04 118 aa11.01□□□□□ -0.65
CHRNB4-204ENST00000559849 MNDAP41218 407 aa11.01□□□□□ -0.65
CHRNB4-204ENST00000559849 HTD2P86397 168 aa11.01□□□□□ -0.65
CHRNB4-204ENST00000559849 MADCAM1Q13477 382 aa11.01□□□□□ -0.65
CHRNB4-204ENST00000559849 PLAC9Q5JTB6 97 aa11.01□□□□□ -0.65
CHRNB4-204ENST00000559849 LINC00311Q8N616 119 aa11.01□□□□□ -0.65
CHRNB4-204ENST00000559849 OR10R2Q8NGX6 335 aa11.01□□□□□ -0.65
CHRNB4-204ENST00000559849 OR1L1Q8NH94 360 aa11.01□□□□□ -0.65
CHRNB4-204ENST00000559849 S100ZQ8WXG8 99 aa11.01□□□□□ -0.65
CHRNB4-204ENST00000559849 RPEQ96AT9 228 aa11.01□□□□□ -0.65
CHRNB4-204ENST00000559849 GALMQ96C23 342 aa11.01□□□□□ -0.65
CHRNB4-204ENST00000559849 RAB3CQ96E17 227 aa11.01□□□□□ -0.65
CHRNB4-204ENST00000559849 SLIRPQ9GZT3 109 aaKnown RBP11.01□□□□□ -0.65
CHRNB4-204ENST00000559849 OR2S2Q9NQN1 319 aa11.01□□□□□ -0.65
CHRNB4-204ENST00000559849 TRBV6-6A0A0A6YYG2 114 aa11□□□□□ -0.65
CHRNB4-204ENST00000559849 RAB27BO00194 218 aa11□□□□□ -0.65
CHRNB4-204ENST00000559849 CLEC2LP0C7M8 214 aa11□□□□□ -0.65
CHRNB4-204ENST00000559849 MDKP21741 143 aaPredicted RBP11□□□□□ -0.65
CHRNB4-204ENST00000559849 STEAP3Q658P3 488 aa11□□□□□ -0.65
CHRNB4-204ENST00000559849 ZNF880Q6PDB4 577 aa11□□□□□ -0.65
CHRNB4-204ENST00000559849 MOB1BQ7L9L4 216 aa11□□□□□ -0.65
CHRNB4-204ENST00000559849 CMSS1Q9BQ75 279 aaKnown RBP11□□□□□ -0.65
CHRNB4-204ENST00000559849 OCSTAMPQ9BR26 566 aa11□□□□□ -0.65
CHRNB4-204ENST00000559849 ABRACLQ9P1F3 81 aa11□□□□□ -0.65
CHRNB4-204ENST00000559849 MGAT4AQ9UM21 535 aa11□□□□□ -0.65
CHRNB4-204ENST00000559849 A0A1W2PPE3 182 aa11□□□□□ -0.65
CHRNB4-204ENST00000559849 TMEM127O75204 238 aa11□□□□□ -0.65
CHRNB4-204ENST00000559849 TSPAN9O75954 239 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms