RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 SDIM1Q6ZPB5 146 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 SYCE1Q8N0S2 351 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 DNAAF3Q8N9W5 541 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 OR5K1Q8NHB7 308 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 GPR119Q8TDV5 335 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 PPWD1Q96BP3 646 aaKnown RBP1.1□□□□□ -2.23
SCFD1-218ENST00000556256 TAMM41Q96BW9 452 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 UPK3BQ9BT76 320 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 MED10Q9BTT4 135 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 BCL2L14Q9BZR8 327 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 SLC19A3Q9BZV2 496 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 C16orf95Q9H693 158 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 TUBA4BQ9H853 241 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 UBQLN4Q9NRR5 601 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 TMEM216Q9P0N5 145 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 PSORS1C2Q9UIG4 136 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 WASHC3Q9Y3C0 194 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 HEY1Q9Y5J3 304 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 ADGRB3O60242 1522 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 MYO16Q9Y6X6 1858 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 ADAMTSL1Q8N6G6 1762 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 TMEM213A2RRL7 107 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 B4DEV8 164 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 F5H5T6 163 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 GOLGA8RI6L899 631 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 CYTH3O43739 400 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 NDUFS6O75380 124 aaKnown RBP1.09□□□□□ -2.23
SCFD1-218ENST00000556256 ZNF189O75820 626 aaPredicted RBP1.09□□□□□ -2.23
SCFD1-218ENST00000556256 CDK14O94921 469 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 RAB36O95755 333 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 GZMHP20718 246 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 PSMA1P25786 263 aaKnown RBP1.09□□□□□ -2.23
SCFD1-218ENST00000556256 BLVRBP30043 206 aaPredicted RBP1.09□□□□□ -2.23
SCFD1-218ENST00000556256 GABRA3P34903 492 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 RCVRNP35243 200 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 GABRA4P48169 554 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 PSMB3P49720 205 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 PSMD7P51665 324 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 KRTAP12-1P59990 96 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 GABARAPL2P60520 117 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 FGF12P61328 243 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 PMS2P3Q13401 168 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 HTR4Q13639 388 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 EXOC3L4Q17RC7 722 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 ZNF767PQ75MW2 155 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 DOLPP1Q86YN1 238 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 ZBTB8OSQ8IWT0 167 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 TMEM75Q8N9X5 138 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 OR5AK3PQ8NH89 298 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 GNB1LQ9BYB4 327 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 SMDT1Q9H4I9 107 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 C1orf109Q9NX04 203 aa1.09□□□□□ -2.23
SCFD1-218ENST00000556256 MRPS16Q9Y3D3 137 aaKnown RBP1.09□□□□□ -2.23
SCFD1-218ENST00000556256 LRPPRCP42704 1394 aaKnown RBP1.08□□□□□ -2.24
SCFD1-218ENST00000556256 TMEM94Q12767 1356 aa1.08□□□□□ -2.24
SCFD1-218ENST00000556256 DNMT1P26358 1616 aaKnown RBP1.08□□□□□ -2.24
SCFD1-218ENST00000556256 F8VZ95 297 aa1.08□□□□□ -2.24
SCFD1-218ENST00000556256 SMLR1H3BR10 107 aa1.08□□□□□ -2.24
SCFD1-218ENST00000556256 M0QYV0 167 aa1.08□□□□□ -2.24
SCFD1-218ENST00000556256 TOR1AO14656 332 aa1.08□□□□□ -2.24
SCFD1-218ENST00000556256 CRYGDP07320 174 aa1.08□□□□□ -2.24
SCFD1-218ENST00000556256 AKR1C2P52895 323 aa1.08□□□□□ -2.24
SCFD1-218ENST00000556256 DEFA6Q01524 100 aa1.08□□□□□ -2.24
SCFD1-218ENST00000556256 SS18Q15532 418 aa1.08□□□□□ -2.24
SCFD1-218ENST00000556256 MRPL51Q4U2R6 128 aaKnown RBP1.08□□□□□ -2.24
SCFD1-218ENST00000556256 TRMT12Q53H54 448 aaKnown RBP1.08□□□□□ -2.24
SCFD1-218ENST00000556256 PCOTHQ58A44 107 aa1.08□□□□□ -2.24
SCFD1-218ENST00000556256 FAM45BPQ6NSW5 357 aa1.08□□□□□ -2.24
SCFD1-218ENST00000556256 TTC33Q6PID6 262 aaPredicted RBP1.08□□□□□ -2.24
SCFD1-218ENST00000556256 BOD1L2Q8IYS8 172 aa1.08□□□□□ -2.24
SCFD1-218ENST00000556256 OR52E4Q8NGH9 312 aa1.08□□□□□ -2.24
SCFD1-218ENST00000556256 OR4C16Q8NGL9 310 aa1.08□□□□□ -2.24
SCFD1-218ENST00000556256 OR5C1Q8NGR4 320 aa1.08□□□□□ -2.24
SCFD1-218ENST00000556256 TNFAIP8L1Q8WVP5 186 aa1.08□□□□□ -2.24
SCFD1-218ENST00000556256 KLF6Q99612 283 aaPredicted RBP1.08□□□□□ -2.24
SCFD1-218ENST00000556256 EBNA1BP2Q99848 306 aaKnown RBP1.08□□□□□ -2.24
SCFD1-218ENST00000556256 C11orf1Q9H5F2 150 aa1.08□□□□□ -2.24
SCFD1-218ENST00000556256 LINC00527Q9UJ94 153 aa1.08□□□□□ -2.24
SCFD1-218ENST00000556256 TRPM3Q9HCF6 1732 aaPredicted RBP1.08□□□□□ -2.24
SCFD1-218ENST00000556256 PTPRJQ12913 1337 aa1.08□□□□□ -2.24
SCFD1-218ENST00000556256 PCNX2A6NKB5 2137 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 SLIT2O94813 1529 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 TRGV4A0A0C4DH28 118 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 KNCNA6PVL3 124 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 K7EQS6 105 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 LIN7AO14910 233 aaPredicted RBP1.07□□□□□ -2.24
SCFD1-218ENST00000556256 TOX3O15405 576 aaPredicted RBP1.07□□□□□ -2.24
SCFD1-218ENST00000556256 CRTAPO75718 401 aaPredicted RBP1.07□□□□□ -2.24
SCFD1-218ENST00000556256 ASS1P00966 412 aaKnown RBP1.07□□□□□ -2.24
SCFD1-218ENST00000556256 IGLV3-27P01718 113 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 ZNF7P17097 686 aaPredicted RBP1.07□□□□□ -2.24
SCFD1-218ENST00000556256 CDK2P24941 298 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 OPRM1P35372 400 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 OR1E2P47887 323 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 LINC00313P59037 77 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 DEFB103AP81534 67 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 ZNF117Q03924 483 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 PDK2Q15119 407 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 ANGPT1Q15389 498 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 ZNHIT3Q15649 155 aaPredicted RBP1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms