RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 XKR8Q9H6D3 395 aa1.07□□□□□ -2.24
SCFD1-214ENST00000554819 TAS2R13Q9NYV9 303 aa1.07□□□□□ -2.24
SCFD1-214ENST00000554819 CLEC2DQ9UHP7 191 aa1.07□□□□□ -2.24
SCFD1-214ENST00000554819 ALG5Q9Y673 324 aa1.07□□□□□ -2.24
SCFD1-214ENST00000554819 RAB3GAP2Q9H2M9 1393 aa1.07□□□□□ -2.24
SCFD1-214ENST00000554819 IGHV3-73A0A0B4J1V6 119 aa1.06□□□□□ -2.24
SCFD1-214ENST00000554819 DHRS12A0PJE2 317 aa1.06□□□□□ -2.24
SCFD1-214ENST00000554819 ARRDC5A6NEK1 342 aa1.06□□□□□ -2.24
SCFD1-214ENST00000554819 LY6HO94772 140 aa1.06□□□□□ -2.24
SCFD1-214ENST00000554819 SLC25A16P16260 332 aa1.06□□□□□ -2.24
SCFD1-214ENST00000554819 ACTR1BP42025 376 aa1.06□□□□□ -2.24
SCFD1-214ENST00000554819 HINT1P49773 126 aaPredicted RBP1.06□□□□□ -2.24
SCFD1-214ENST00000554819 ZBTB6Q15916 424 aa1.06□□□□□ -2.24
SCFD1-214ENST00000554819 BSXQ3C1V8 233 aa1.06□□□□□ -2.24
SCFD1-214ENST00000554819 MRPL51Q4U2R6 128 aaKnown RBP1.06□□□□□ -2.24
SCFD1-214ENST00000554819 LGALS9CQ6DKI2 356 aa1.06□□□□□ -2.24
SCFD1-214ENST00000554819 SUN5Q8TC36 379 aa1.06□□□□□ -2.24
SCFD1-214ENST00000554819 CATSPER2Q96P56 530 aa1.06□□□□□ -2.24
SCFD1-214ENST00000554819 MGLLQ99685 303 aa1.06□□□□□ -2.24
SCFD1-214ENST00000554819 C1QTNF6Q9BXI9 259 aa1.06□□□□□ -2.24
SCFD1-214ENST00000554819 IFT46Q9NQC8 304 aa1.06□□□□□ -2.24
SCFD1-214ENST00000554819 AMMECR1Q9Y4X0 333 aaPredicted RBP1.06□□□□□ -2.24
SCFD1-214ENST00000554819 ZNF638Q14966 1978 aaKnown RBP1.06□□□□□ -2.24
SCFD1-214ENST00000554819 DENND4BO75064 1496 aaPredicted RBP1.05□□□□□ -2.24
SCFD1-214ENST00000554819 DNMT1P26358 1616 aaKnown RBP1.05□□□□□ -2.24
SCFD1-214ENST00000554819 TRGV2A0A075B6R0 118 aa1.05□□□□□ -2.24
SCFD1-214ENST00000554819 RAB19A4D1S5 217 aa1.05□□□□□ -2.24
SCFD1-214ENST00000554819 UBFD1O14562 309 aaKnown RBP1.05□□□□□ -2.24
SCFD1-214ENST00000554819 CYTH3O43739 400 aa1.05□□□□□ -2.24
SCFD1-214ENST00000554819 EPPINO95925 133 aa1.05□□□□□ -2.24
SCFD1-214ENST00000554819 NAPSAO96009 420 aa1.05□□□□□ -2.24
SCFD1-214ENST00000554819 ALOX5APP20292 161 aa1.05□□□□□ -2.24
SCFD1-214ENST00000554819 DEFA6Q01524 100 aa1.05□□□□□ -2.24
SCFD1-214ENST00000554819 HENMT1Q5T8I9 393 aaKnown RBP1.05□□□□□ -2.24
SCFD1-214ENST00000554819 MRPL52Q86TS9 123 aaKnown RBP1.05□□□□□ -2.24
SCFD1-214ENST00000554819 ZNF283Q8N7M2 679 aa1.05□□□□□ -2.24
SCFD1-214ENST00000554819 OR4X2Q8NGF9 303 aa1.05□□□□□ -2.24
SCFD1-214ENST00000554819 NAA38Q9BRA0 125 aaKnown RBP1.05□□□□□ -2.24
SCFD1-214ENST00000554819 HINT2Q9BX68 163 aa1.05□□□□□ -2.24
SCFD1-214ENST00000554819 PECRQ9BY49 303 aa1.05□□□□□ -2.24
SCFD1-214ENST00000554819 MRPL32Q9BYC8 188 aaKnown RBP1.05□□□□□ -2.24
SCFD1-214ENST00000554819 ADAMTSL1Q8N6G6 1762 aa1.05□□□□□ -2.24
SCFD1-214ENST00000554819 TNIKQ9UKE5 1360 aa1.05□□□□□ -2.24
SCFD1-214ENST00000554819 H0YC42 278 aa1.04□□□□□ -2.24
SCFD1-214ENST00000554819 H3BPC8 53 aa1.04□□□□□ -2.24
SCFD1-214ENST00000554819 RCVRNP35243 200 aa1.04□□□□□ -2.24
SCFD1-214ENST00000554819 PPP1CCP36873 323 aaKnown RBP1.04□□□□□ -2.24
SCFD1-214ENST00000554819 AQP5P55064 265 aa1.04□□□□□ -2.24
SCFD1-214ENST00000554819 AGTRAPQ6RW13 159 aa1.04□□□□□ -2.24
SCFD1-214ENST00000554819 ST13P4Q8IZP2 240 aaPredicted RBP1.04□□□□□ -2.24
SCFD1-214ENST00000554819 OR2Y1Q8NGV0 311 aa1.04□□□□□ -2.24
SCFD1-214ENST00000554819 OR11L1Q8NGX0 322 aa1.04□□□□□ -2.24
SCFD1-214ENST00000554819 OR5P2Q8WZ92 322 aa1.04□□□□□ -2.24
SCFD1-214ENST00000554819 MRAP2Q96G30 205 aa1.04□□□□□ -2.24
SCFD1-214ENST00000554819 ZNF426Q9BUY5 554 aa1.04□□□□□ -2.24
SCFD1-214ENST00000554819 RAB1BQ9H0U4 201 aa1.04□□□□□ -2.24
SCFD1-214ENST00000554819 OR51E2Q9H255 320 aa1.04□□□□□ -2.24
SCFD1-214ENST00000554819 DMAC2Q9NW81 257 aa1.04□□□□□ -2.24
SCFD1-214ENST00000554819 DOK5Q9P104 306 aa1.04□□□□□ -2.24
SCFD1-214ENST00000554819 PUS1Q9Y606 427 aaKnown RBP eCLIP1.04□□□□□ -2.24
SCFD1-214ENST00000554819 ABCB11O95342 1321 aa1.04□□□□□ -2.24
SCFD1-214ENST00000554819 ARHGAP32A7KAX9 2087 aa1.03□□□□□ -2.24
SCFD1-214ENST00000554819 RP1L1Q8IWN7 2480 aaPredicted RBP1.03□□□□□ -2.24
SCFD1-214ENST00000554819 IGHV3-15A0A0B4J1V0 119 aa1.03□□□□□ -2.24
SCFD1-214ENST00000554819 IGKV1D-43A0A0B4J1Z2 117 aa1.03□□□□□ -2.24
SCFD1-214ENST00000554819 GRIFINA4D1Z8 144 aa1.03□□□□□ -2.24
SCFD1-214ENST00000554819 TMEM235A6NFC5 223 aa1.03□□□□□ -2.24
SCFD1-214ENST00000554819 J3QQQ9 107 aa1.03□□□□□ -2.24
SCFD1-214ENST00000554819 POLR3GO15318 223 aaPredicted RBP1.03□□□□□ -2.24
SCFD1-214ENST00000554819 CDK14O94921 469 aa1.03□□□□□ -2.24
SCFD1-214ENST00000554819 GADD45AP24522 165 aa1.03□□□□□ -2.24
SCFD1-214ENST00000554819 ATP6V0CP27449 155 aa1.03□□□□□ -2.24
SCFD1-214ENST00000554819 UBE2KP61086 200 aa1.03□□□□□ -2.24
SCFD1-214ENST00000554819 RPL26P61254 145 aaKnown RBP1.03□□□□□ -2.24
SCFD1-214ENST00000554819 PDGFRLQ15198 375 aa1.03□□□□□ -2.24
SCFD1-214ENST00000554819 UAP1Q16222 522 aaPredicted RBP1.03□□□□□ -2.24
SCFD1-214ENST00000554819 TPRXLQ17RH7 258 aa1.03□□□□□ -2.24
SCFD1-214ENST00000554819 C18orf21Q32NC0 220 aaPredicted RBP1.03□□□□□ -2.24
SCFD1-214ENST00000554819 RASL11AQ6T310 242 aa1.03□□□□□ -2.24
SCFD1-214ENST00000554819 Q6ZRN7 208 aaPredicted RBP1.03□□□□□ -2.24
SCFD1-214ENST00000554819 CDRT4Q8N9R6 151 aa1.03□□□□□ -2.24
SCFD1-214ENST00000554819 ANGPTL6Q8NI99 470 aa1.03□□□□□ -2.24
SCFD1-214ENST00000554819 LHFPL5Q8TAF8 219 aa1.03□□□□□ -2.24
SCFD1-214ENST00000554819 LRRC20Q8TCA0 184 aa1.03□□□□□ -2.24
SCFD1-214ENST00000554819 MED18Q9BUE0 208 aa1.03□□□□□ -2.24
SCFD1-214ENST00000554819 ZNF471Q9BX82 626 aaPredicted RBP1.03□□□□□ -2.24
SCFD1-214ENST00000554819 CDCA4Q9BXL8 241 aa1.03□□□□□ -2.24
SCFD1-214ENST00000554819 GTSF1LQ9H1H1 148 aa1.03□□□□□ -2.24
SCFD1-214ENST00000554819 C16orf95Q9H693 158 aa1.03□□□□□ -2.24
SCFD1-214ENST00000554819 TMEM216Q9P0N5 145 aa1.03□□□□□ -2.24
SCFD1-214ENST00000554819 PRO2289Q9P1D8 64 aa1.03□□□□□ -2.24
SCFD1-214ENST00000554819 NXT1Q9UKK6 140 aaKnown RBP1.03□□□□□ -2.24
SCFD1-214ENST00000554819 RPL26L1Q9UNX3 145 aaKnown RBP1.03□□□□□ -2.24
SCFD1-214ENST00000554819 A0A1B0GW15 77 aa1.02□□□□□ -2.25
SCFD1-214ENST00000554819 NCKAP5O14513 1909 aa1.02□□□□□ -2.25
SCFD1-214ENST00000554819 PEBP1P30086 187 aaKnown RBP1.02□□□□□ -2.25
SCFD1-214ENST00000554819 TIMM23BQ5SRD1 257 aa1.02□□□□□ -2.25
SCFD1-214ENST00000554819 Q6ZTI0 123 aa1.02□□□□□ -2.25
SCFD1-214ENST00000554819 AHSA2Q719I0 299 aa1.02□□□□□ -2.25
SCFD1-214ENST00000554819 GLT6D1Q7Z4J2 308 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms