RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 F2RP25116 425 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 S100GP29377 79 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 RPL12P30050 165 aaKnown RBP5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 P2RY1P47900 373 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 FABP6P51161 128 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 LUMP51884 338 aaPredicted RBP5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 RPS23P62266 143 aaKnown RBP5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 SMCO1Q147U7 214 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 SP6Q3SY56 376 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 PHLDA2Q53GA4 152 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 TBC1D26Q86UD7 250 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 BATF2Q8N1L9 274 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 Q8NA96 180 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 NUP37Q8NFH4 326 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 OR10V1Q8NGI7 309 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 OR11L1Q8NGX0 322 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 LHFPL5Q8TAF8 219 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 TMEM171Q8WVE6 324 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 SECTM1Q8WVN6 248 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 S100PBPQ96BU1 408 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 SAT2Q96F10 170 aaPredicted RBP5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 LURAP1Q96LR2 239 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 SPIN2AQ99865 258 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 SPIN2BQ9BPZ2 258 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 SCNM1Q9BWG6 230 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 BARX1Q9HBU1 254 aaPredicted RBP5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 CCL28Q9NRJ3 127 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 SDHAF2Q9NX18 166 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 GSKIPQ9P0R6 139 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 TAAR3PQ9P1P4 343 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 PFDN2Q9UHV9 154 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 ERRFI1Q9UJM3 462 aaPredicted RBP5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 POMT1Q9Y6A1 747 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 CEP250Q9BV73 2442 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 ACACAQ13085 2346 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 ARID1AO14497 2285 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 ICE1Q9Y2F5 2266 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 A0A0G2JNJ9 132 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 A0A1B0GU03 582 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 TMEM30CPA0ZSE6 113 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 RAB19A4D1S5 217 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 MSGN1A6NI15 193 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 KRBOX1C9JBD0 128 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 SIRPB1O00241 398 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 GPR137BO60478 399 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 PSPNO60542 156 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 PITX3O75364 302 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 IGLV2-14P01704 120 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 ADH4P08319 380 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 M6PRP20645 277 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 UCNP55089 124 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 HTD2P86397 168 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 ATXN7L3Q14CW9 347 aaPredicted RBP5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 TESK1Q15569 626 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 IGFBP7Q16270 282 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 SMIM21Q3B7S5 101 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 NMSQ5H8A3 153 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 BEX5Q5H9J7 111 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 TOR2AQ5JU69 321 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 TMEM268Q5VZI3 342 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 THOC7Q6I9Y2 204 aaKnown RBP5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 EIF5AL1Q6IS14 154 aaKnown RBP5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 TRAT1Q6PIZ9 186 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 UQCC3Q6UW78 93 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 C5orf24Q7Z6I8 188 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 ZNF695Q8IW36 515 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 STPG2Q8N412 459 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 RPRMLQ8N4K4 120 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 TCTEX1D1Q8N7M0 179 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 UBAC2Q8NBM4 344 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 DMBX1Q8NFW5 382 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 OR52M1Q8NGK5 317 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 FAM222BQ8WU58 562 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 RNF141Q8WVD5 230 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 LSM10Q969L4 123 aaKnown RBP5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 ERGIC1Q969X5 290 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 SNX22Q96L94 193 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 TAF9BQ9HBM6 251 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 KCNIP1Q9NZI2 227 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 Q9UFV3 132 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 TRAPPC2LQ9UL33 140 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 TP53TG5Q9Y2B4 290 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 UBE2J1Q9Y385 318 aaPredicted RBP5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 DOCK11Q5JSL3 2073 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 MUC6Q6W4X9 2439 aa5.04□□□□□ -1.6
VIPAS39-204ENST00000553576 POLEQ07864 2286 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 GVINP1Q7Z2Y8 2422 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 CFAP47Q6ZTR5 3102 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 NKX2-6A6NCS4 301 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 C16orf97H3BN30 126 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 I3L521 148 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 HSPB6O14558 160 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 ITGB1BP1O14713 200 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 KCNAB3O43448 404 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 ZNF737O75373 536 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 PSG2P11465 335 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 GZMHP20718 246 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 ZP3P21754 424 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 PTAFRP25105 342 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 CD40P25942 277 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms