RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 C11orf44Q8N8P7 122 aa6.69□□□□□ -1.34
SPARC-208ENST00000538026 C8orf31Q8N9H6 132 aa6.69□□□□□ -1.34
SPARC-208ENST00000538026 OR56B4Q8NH76 319 aa6.69□□□□□ -1.34
SPARC-208ENST00000538026 ARHGAP5-AS1Q96IT6 56 aa6.69□□□□□ -1.34
SPARC-208ENST00000538026 RBM14Q96PK6 669 aaKnown RBP6.69□□□□□ -1.34
SPARC-208ENST00000538026 CST11Q9H112 138 aa6.69□□□□□ -1.34
SPARC-208ENST00000538026 RANBP3Q9H6Z4 567 aaPredicted RBP6.69□□□□□ -1.34
SPARC-208ENST00000538026 PLSCR3Q9NRY6 295 aa6.69□□□□□ -1.34
SPARC-208ENST00000538026 AK3Q9UIJ7 227 aa6.69□□□□□ -1.34
SPARC-208ENST00000538026 ELF5Q9UKW6 265 aaPredicted RBP6.69□□□□□ -1.34
SPARC-208ENST00000538026 TRAPPC2LQ9UL33 140 aa6.69□□□□□ -1.34
SPARC-208ENST00000538026 COL7A1Q02388 2944 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 TRBV6-6A0A0A6YYG2 114 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 IGHV3-72A0A0B4J1Y9 119 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 IGHV1-3A0A0C4DH29 117 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 IGKV1-6A0A0C4DH72 117 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 TRIM64CA6NLI5 447 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 LINC01548A6NM66 108 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 IFITM5A6NNB3 132 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 OOSP1A8MZH6 123 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 RAB27BO00194 218 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 PROP1O75360 226 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 TSPAN15O95858 294 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 SNRNP70P08621 437 aaKnown RBP6.68□□□□□ -1.34
SPARC-208ENST00000538026 SNRPBP14678 240 aaKnown RBP6.68□□□□□ -1.34
SPARC-208ENST00000538026 GALP22466 123 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 GADD45AP24522 165 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 PPP1CCP36873 323 aaKnown RBP6.68□□□□□ -1.34
SPARC-208ENST00000538026 TGFBR1P36897 503 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 VEGFCP49767 419 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 ZNF816Q0VGE8 651 aaPredicted RBP6.68□□□□□ -1.34
SPARC-208ENST00000538026 MADCAM1Q13477 382 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 EBI3Q14213 229 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 KCTD21Q4G0X4 260 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 TCTEX1D4Q5JR98 221 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 C10orf99Q6UWK7 81 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 THNSL2Q86YJ6 484 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 PRR18Q8N4B5 295 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 KLHDC1Q8N7A1 406 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 OR4C13Q8NGP0 309 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 RITA1Q96K30 269 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 ZNF251Q9BRH9 671 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 SLC25A33Q9BSK2 321 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 CENPOQ9BU64 300 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 PECRQ9BY49 303 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 NPFFR1Q9GZQ6 430 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 Q9H521 79 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 PLGRKTQ9HBL7 147 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 RAB18Q9NP72 206 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 ABCB10Q9NRK6 738 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 STEAP1Q9UHE8 339 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 HSF4Q9ULV5 492 aa6.68□□□□□ -1.34
SPARC-208ENST00000538026 DNAH7Q8WXX0 4024 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 HSD17B6O14756 317 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 OR2F2O95006 317 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 SCTP09683 121 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 VSIG10L2P0DP72 767 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 CD28P10747 220 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 SDC2P34741 201 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 OR3A3P47888 321 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 HTD2P86397 168 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 HNF4GQ14541 408 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 HERPUD1Q15011 391 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 NEDD8Q15843 81 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 ABCA11PQ4W5N1 156 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 LY6G6FQ5SQ64 297 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 C6orf183Q5T699 404 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 C11orf88Q6PI97 169 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 TREML4Q6UXN2 200 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 ZNF554Q86TJ5 538 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 LYG1Q8N1E2 194 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 OR10X1Q8NGY0 326 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 CAPSLQ8WWF8 208 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 RTN4IP1Q8WWV3 396 aaPredicted RBP6.67□□□□□ -1.34
SPARC-208ENST00000538026 TOMM40LQ969M1 308 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 RPEQ96AT9 228 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 CREB3L1Q96BA8 519 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 EAF1Q96JC9 268 aaPredicted RBP6.67□□□□□ -1.34
SPARC-208ENST00000538026 NEDD4LQ96PU5 975 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 LIN7BQ9HAP6 207 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 Q9N2K0 584 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 OR2S2Q9NQN1 319 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 PITPNC1Q9UKF7 332 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 RAB22AQ9UL26 194 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 STUB1Q9UNE7 303 aa6.67□□□□□ -1.34
SPARC-208ENST00000538026 IGKV1D-8A0A087WSZ0 117 aa6.66□□□□□ -1.34
SPARC-208ENST00000538026 MFNGO00587 321 aa6.66□□□□□ -1.34
SPARC-208ENST00000538026 SPINT2O43291 252 aa6.66□□□□□ -1.34
SPARC-208ENST00000538026 YPEL1O60688 119 aa6.66□□□□□ -1.34
SPARC-208ENST00000538026 IGKV1D-33P01593 117 aa6.66□□□□□ -1.34
SPARC-208ENST00000538026 IGKV1-33P01594 117 aa6.66□□□□□ -1.34
SPARC-208ENST00000538026 LPLP06858 475 aa6.66□□□□□ -1.34
SPARC-208ENST00000538026 CD3GP09693 182 aa6.66□□□□□ -1.34
SPARC-208ENST00000538026 GNB3P16520 340 aa6.66□□□□□ -1.34
SPARC-208ENST00000538026 CD36P16671 472 aa6.66□□□□□ -1.34
SPARC-208ENST00000538026 RAB3BP20337 219 aa6.66□□□□□ -1.34
SPARC-208ENST00000538026 BRS3P32247 399 aa6.66□□□□□ -1.34
SPARC-208ENST00000538026 CEACAM3P40198 252 aa6.66□□□□□ -1.34
SPARC-208ENST00000538026 RAB7AP51149 207 aa6.66□□□□□ -1.34
SPARC-208ENST00000538026 PSMD7P51665 324 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms