RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 NANOGNBQ7Z5D8 188 aa3.64□□□□□ -1.83
CASP4-213ENST00000534356 WDFY1Q8IWB7 410 aa3.64□□□□□ -1.83
CASP4-213ENST00000534356 ZNF561Q8N587 486 aa3.64□□□□□ -1.83
CASP4-213ENST00000534356 SIGLECL1Q8N7X8 197 aa3.64□□□□□ -1.83
CASP4-213ENST00000534356 MNS1Q8NEH6 495 aa3.64□□□□□ -1.83
CASP4-213ENST00000534356 RHEBL1Q8TAI7 183 aa3.64□□□□□ -1.83
CASP4-213ENST00000534356 APH1AQ96BI3 265 aa3.64□□□□□ -1.83
CASP4-213ENST00000534356 RASD2Q96D21 266 aa3.64□□□□□ -1.83
CASP4-213ENST00000534356 LRRC39Q96DD0 335 aa3.64□□□□□ -1.83
CASP4-213ENST00000534356 RACGAP1Q9H0H5 632 aa3.64□□□□□ -1.83
CASP4-213ENST00000534356 RPP21Q9H633 154 aaKnown RBP3.64□□□□□ -1.83
CASP4-213ENST00000534356 SNX12Q9UMY4 172 aa3.64□□□□□ -1.83
CASP4-213ENST00000534356 NOSIPQ9Y314 301 aaKnown RBP3.64□□□□□ -1.83
CASP4-213ENST00000534356 CAB39Q9Y376 341 aaPredicted RBP3.64□□□□□ -1.83
CASP4-213ENST00000534356 DYNC2H1Q8NCM8 4307 aaKnown RBP3.63□□□□□ -1.83
CASP4-213ENST00000534356 DOCK11Q5JSL3 2073 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 SACSQ9NZJ4 4579 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 SPRR5A0A1B0GTR4 108 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 MDFIC2A0A1B0GVS7 189 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 SYCE1LA8MT33 242 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 F6UB75 175 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 PLXNB1O43157 2135 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 FABP3P05413 133 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 MSMBP08118 114 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 FGF4P08620 206 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 PABPC4LP0CB38 370 aaKnown RBP3.63□□□□□ -1.83
CASP4-213ENST00000534356 GALP22466 123 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 ME2P23368 584 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 ATP5IP56385 69 aaPredicted RBP3.63□□□□□ -1.83
CASP4-213ENST00000534356 OR2B6P58173 313 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 SNRPD2P62316 118 aaKnown RBP3.63□□□□□ -1.83
CASP4-213ENST00000534356 MERTKQ12866 999 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 RCN1Q15293 331 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 MAPK14Q16539 360 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 PRAMEF5Q5TYX0 476 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 PRAMEF6Q5VXH4 476 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 TMPPEQ6ZT21 453 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 LRRC8AQ8IWT6 810 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 MS4A15Q8N5U1 240 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 OR9K2Q8NGE7 335 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 OR5D16Q8NGK9 328 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 OR4S2Q8NH73 311 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 ZNF418Q8TF45 676 aaPredicted RBP3.63□□□□□ -1.83
CASP4-213ENST00000534356 FRZBQ92765 325 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 FAM3DQ96BQ1 224 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 ZMYND19Q96E35 227 aaPredicted RBP3.63□□□□□ -1.83
CASP4-213ENST00000534356 TSPAN32Q96QS1 320 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 NCOR1P1Q9H4R4 102 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 UBQLN4Q9NRR5 601 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 PAQR5Q9NXK6 330 aaPredicted RBP3.63□□□□□ -1.83
CASP4-213ENST00000534356 TMEM216Q9P0N5 145 aa3.63□□□□□ -1.83
CASP4-213ENST00000534356 DNAH3Q8TD57 4116 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 TMEM72A0PK05 275 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 B4DSR2 109 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 DYNC1I1O14576 645 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 RAD51CO43502 376 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 MRPL33O75394 65 aaKnown RBP3.62□□□□□ -1.83
CASP4-213ENST00000534356 RP2O75695 350 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 MPZL1O95297 269 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 HMGN2P05204 90 aaKnown RBP3.62□□□□□ -1.83
CASP4-213ENST00000534356 UBTFL6P0CB48 400 aaPredicted RBP3.62□□□□□ -1.83
CASP4-213ENST00000534356 EIF1P41567 113 aaKnown RBP3.62□□□□□ -1.83
CASP4-213ENST00000534356 P2RX1P51575 399 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 PLTPP55058 493 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 AQP5P55064 265 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 C2orf54Q08AI8 447 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 BNIP2Q12982 314 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 TMED1Q13445 227 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 ZNHIT3Q15649 155 aaPredicted RBP3.62□□□□□ -1.83
CASP4-213ENST00000534356 ZSCAN26Q16670 478 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 C5orf47Q569G3 176 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 ZNF678Q5SXM1 525 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 NOXRED1Q6NXP6 359 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 METAP1DQ6UB28 335 aaPredicted RBP3.62□□□□□ -1.83
CASP4-213ENST00000534356 CASP12Q6UXS9 341 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 ZNF836Q6ZNA1 936 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 COX18Q8N8Q8 333 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 OR1S2Q8NGQ3 325 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 OR5AK3PQ8NH89 298 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 CDKL2Q92772 493 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 CHMP6Q96FZ7 201 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 RSPO3Q9BXY4 272 aaPredicted RBP3.62□□□□□ -1.83
CASP4-213ENST00000534356 FAM192AQ9GZU8 254 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 RAB1BQ9H0U4 201 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 CRLF2Q9HC73 371 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 TAS2R7Q9NYW3 318 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 COL7A1Q02388 2944 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 BIRC6Q9NR09 4857 aa3.62□□□□□ -1.83
CASP4-213ENST00000534356 IGHV2OR16-5A0A0B4J2B6 119 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 SERTM2A0A1B0GWG4 89 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 A0A1W2PQD3 144 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 TRAPPC2LH3BP13 241 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 GABARAPO95166 117 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 OTCP00480 354 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 CST1P01037 141 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 ANXA8P13928 327 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 ELK4P28324 431 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 HMOX2P30519 316 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 MAGEA12P43365 314 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 ERVS71-1P61550 626 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms