RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 LIN7CQ9NUP9 197 aaKnown RBP6.91□□□□□ -1.3
USF1-210ENST00000531842 FKBP14Q9NWM8 211 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 DIMT1Q9UNQ2 313 aaKnown RBP6.91□□□□□ -1.3
USF1-210ENST00000531842 NPIPB11E5RHQ5 1161 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 GABRPO00591 440 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 ATP6V0E1O15342 81 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 OGG1O15527 345 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 JTBO76095 146 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 IGHV3-11P01762 117 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 CSTBP04080 98 aaKnown RBP6.9□□□□□ -1.3
USF1-210ENST00000531842 CD2P06729 351 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 GZMHP20718 246 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 DCKP27707 260 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 PPIFP30405 207 aaKnown RBP6.9□□□□□ -1.3
USF1-210ENST00000531842 CAPGP40121 348 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 VEGFCP49767 419 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 ZNF816Q0VGE8 651 aaPredicted RBP6.9□□□□□ -1.3
USF1-210ENST00000531842 MRPL28Q13084 256 aaKnown RBP6.9□□□□□ -1.3
USF1-210ENST00000531842 IL13RA2Q14627 380 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 ATAD3CQ5T2N8 411 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 RSBN1Q5VWQ0 802 aaPredicted RBP6.9□□□□□ -1.3
USF1-210ENST00000531842 TTC23Q5W5X9 447 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 DMKNQ6E0U4 476 aaPredicted RBP6.9□□□□□ -1.3
USF1-210ENST00000531842 SLC16A12Q6ZSM3 486 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 IZUMO1Q8IYV9 350 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 FAM71E2Q8N5Q1 922 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 SUMF2Q8NBJ7 301 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 OR10A7Q8NGE5 316 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 OR2T10Q8NGZ9 312 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 NEK7Q8TDX7 302 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 CCDC107Q8WV48 283 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 ARL11Q969Q4 196 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 PGLYRP3Q96LB9 341 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 RASL11BQ9BPW5 248 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 GON7Q9BXV9 100 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 METTL9Q9H1A3 318 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 C19orf73Q9NVV2 129 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 PAK1IP1Q9NWT1 392 aaPredicted RBP6.9□□□□□ -1.3
USF1-210ENST00000531842 TAS2R4Q9NYW5 299 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 PSORS1C1Q9UIG5 152 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 ST3GAL6Q9Y274 331 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 FBXO7Q9Y3I1 522 aa6.9□□□□□ -1.3
USF1-210ENST00000531842 TMEM30CPA0ZSE6 113 aa6.89□□□□□ -1.31
USF1-210ENST00000531842 SDCBPO00560 298 aaPredicted RBP6.89□□□□□ -1.31
USF1-210ENST00000531842 SOX15O60248 233 aa6.89□□□□□ -1.31
USF1-210ENST00000531842 CDRT1O95170 752 aa6.89□□□□□ -1.31
USF1-210ENST00000531842 IL3RAP26951 378 aa6.89□□□□□ -1.31
USF1-210ENST00000531842 SOX6P35712 828 aa6.89□□□□□ -1.31
USF1-210ENST00000531842 INSL3P51460 131 aa6.89□□□□□ -1.31
USF1-210ENST00000531842 AQP4P55087 323 aa6.89□□□□□ -1.31
USF1-210ENST00000531842 PPP3R1P63098 170 aa6.89□□□□□ -1.31
USF1-210ENST00000531842 NDPQ00604 133 aa6.89□□□□□ -1.31
USF1-210ENST00000531842 ST3GAL4Q11206 333 aa6.89□□□□□ -1.31
USF1-210ENST00000531842 ACSM6Q6P461 480 aa6.89□□□□□ -1.31
USF1-210ENST00000531842 ZFP41Q8N8Y5 198 aa6.89□□□□□ -1.31
USF1-210ENST00000531842 OR52N1Q8NH53 320 aa6.89□□□□□ -1.31
USF1-210ENST00000531842 GPR148Q8TDV2 347 aa6.89□□□□□ -1.31
USF1-210ENST00000531842 RTN4IP1Q8WWV3 396 aaPredicted RBP6.89□□□□□ -1.31
USF1-210ENST00000531842 ST6GALNAC6Q969X2 333 aa6.89□□□□□ -1.31
USF1-210ENST00000531842 UBE2E2Q96LR5 201 aa6.89□□□□□ -1.31
USF1-210ENST00000531842 LINC00574Q9H8X3 128 aa6.89□□□□□ -1.31
USF1-210ENST00000531842 C8orf4Q9NR00 106 aa6.89□□□□□ -1.31
USF1-210ENST00000531842 PARP11Q9NR21 331 aa6.89□□□□□ -1.31
USF1-210ENST00000531842 TPSG1Q9NRR2 321 aa6.89□□□□□ -1.31
USF1-210ENST00000531842 PLCXD1Q9NUJ7 323 aa6.89□□□□□ -1.31
USF1-210ENST00000531842 BABAM2Q9NXR7 383 aa6.89□□□□□ -1.31
USF1-210ENST00000531842 ZNF107Q9UII5 783 aaPredicted RBP6.89□□□□□ -1.31
USF1-210ENST00000531842 VSIG4Q9Y279 399 aa6.89□□□□□ -1.31
USF1-210ENST00000531842 KIAA1109Q2LD37 5005 aa6.88□□□□□ -1.31
USF1-210ENST00000531842 TRAV8-7A0A075B6U6 113 aa6.88□□□□□ -1.31
USF1-210ENST00000531842 TRBV5-5A0A0J9YX44 114 aa6.88□□□□□ -1.31
USF1-210ENST00000531842 GEMIN2O14893 280 aaKnown RBP6.88□□□□□ -1.31
USF1-210ENST00000531842 RRP9O43818 475 aaKnown RBP6.88□□□□□ -1.31
USF1-210ENST00000531842 MOSP00540 346 aa6.88□□□□□ -1.31
USF1-210ENST00000531842 ARSBP15848 533 aa6.88□□□□□ -1.31
USF1-210ENST00000531842 IGFBP3P17936 291 aaPredicted RBP6.88□□□□□ -1.31
USF1-210ENST00000531842 SERPINA2P20848 420 aa6.88□□□□□ -1.31
USF1-210ENST00000531842 BLVRBP30043 206 aaPredicted RBP6.88□□□□□ -1.31
USF1-210ENST00000531842 ZNF93P35789 620 aaPredicted RBP6.88□□□□□ -1.31
USF1-210ENST00000531842 VHLP40337 213 aa6.88□□□□□ -1.31
USF1-210ENST00000531842 RAB9AP51151 201 aa6.88□□□□□ -1.31
USF1-210ENST00000531842 INSL4Q14641 139 aa6.88□□□□□ -1.31
USF1-210ENST00000531842 ECSCRQ19T08 205 aa6.88□□□□□ -1.31
USF1-210ENST00000531842 CCDC58Q4VC31 144 aa6.88□□□□□ -1.31
USF1-210ENST00000531842 DDI2Q5TDH0 399 aa6.88□□□□□ -1.31
USF1-210ENST00000531842 RPL22L1Q6P5R6 122 aaKnown RBP6.88□□□□□ -1.31
USF1-210ENST00000531842 TMEM65Q6PI78 240 aa6.88□□□□□ -1.31
USF1-210ENST00000531842 ASCL4Q6XD76 172 aa6.88□□□□□ -1.31
USF1-210ENST00000531842 LYPD6Q86Y78 171 aa6.88□□□□□ -1.31
USF1-210ENST00000531842 PRR18Q8N4B5 295 aa6.88□□□□□ -1.31
USF1-210ENST00000531842 STX19Q8N4C7 294 aa6.88□□□□□ -1.31
USF1-210ENST00000531842 OR10V1Q8NGI7 309 aa6.88□□□□□ -1.31
USF1-210ENST00000531842 GHSRQ92847 366 aa6.88□□□□□ -1.31
USF1-210ENST00000531842 TMEM80Q96HE8 168 aa6.88□□□□□ -1.31
USF1-210ENST00000531842 RSRP1Q9BUV0 290 aa6.88□□□□□ -1.31
USF1-210ENST00000531842 TMEM138Q9NPI0 162 aa6.88□□□□□ -1.31
USF1-210ENST00000531842 GNG12Q9UBI6 72 aa6.88□□□□□ -1.31
USF1-210ENST00000531842 A3GALT2U3KPV4 340 aa6.88□□□□□ -1.31
USF1-210ENST00000531842 TRBV5-7A0A0A0MS05 114 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 ERICH4A6NGS2 130 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms