RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 OR1I1O60431 355 aa-2.7□□□□□ -2.84
RNU6-542P-201ENST00000516405 KINO60870 393 aaKnown RBP-2.7□□□□□ -2.84
RNU6-542P-201ENST00000516405 SPRR1AP35321 89 aa-2.7□□□□□ -2.84
RNU6-542P-201ENST00000516405 GABRA2P47869 451 aa-2.7□□□□□ -2.84
RNU6-542P-201ENST00000516405 USF2Q15853 346 aaPredicted RBP-2.7□□□□□ -2.84
RNU6-542P-201ENST00000516405 CDKL4Q5MAI5 379 aa-2.7□□□□□ -2.84
RNU6-542P-201ENST00000516405 MFSD4BQ5TF39 518 aa-2.7□□□□□ -2.84
RNU6-542P-201ENST00000516405 CCDC70Q6NSX1 233 aa-2.7□□□□□ -2.84
RNU6-542P-201ENST00000516405 Q6ZSR3 168 aa-2.7□□□□□ -2.84
RNU6-542P-201ENST00000516405 FNDC9Q8TBE3 224 aa-2.7□□□□□ -2.84
RNU6-542P-201ENST00000516405 PLPPR1Q8TBJ4 325 aa-2.7□□□□□ -2.84
RNU6-542P-201ENST00000516405 SKA1Q96BD8 255 aa-2.7□□□□□ -2.84
RNU6-542P-201ENST00000516405 SMIM8Q96KF7 97 aa-2.7□□□□□ -2.84
RNU6-542P-201ENST00000516405 PARD6BQ9BYG5 372 aa-2.7□□□□□ -2.84
RNU6-542P-201ENST00000516405 NXF2Q9GZY0 626 aaKnown RBP-2.7□□□□□ -2.84
RNU6-542P-201ENST00000516405 RIBC2Q9H4K1 309 aa-2.7□□□□□ -2.84
RNU6-542P-201ENST00000516405 XPNPEP1Q9NQW7 623 aa-2.7□□□□□ -2.84
RNU6-542P-201ENST00000516405 POLE4Q9NR33 117 aa-2.7□□□□□ -2.84
RNU6-542P-201ENST00000516405 HMG20BQ9P0W2 317 aa-2.7□□□□□ -2.84
RNU6-542P-201ENST00000516405 RBM12B-AS1Q9P1G2 102 aa-2.7□□□□□ -2.84
RNU6-542P-201ENST00000516405 CCDC168Q8NDH2 2452 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 TRAV7A0A075B6U4 112 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 CFAP73A6NFT4 308 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 OR11H12B2RN74 326 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 LOC730098B7Z3J9 87 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 CLDN11O75508 207 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 DIRAS3O95661 229 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 IGHV1-69P01742 117 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 UGT2B4P06133 528 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 SCGB1C2P0DMR2 95 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 RALBP11234 206 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 NCK1P16333 377 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 GABRA3P34903 492 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 CA7P43166 264 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 FAM3AP98173 230 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 DEFA6Q01524 100 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 LINC01554Q52M75 96 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 UBE2NLQ5JXB2 153 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 GLRA4Q5JXX5 417 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 PDZK1Q5T2W1 519 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 FAM162BQ5T6X4 162 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 DRAM2Q6UX65 266 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 TPGS1Q6ZTW0 290 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 OR11H2Q8NH07 326 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 CLDND2Q8NHS1 167 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 SCGB1C1Q8TD33 95 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 SYAP1Q96A49 352 aaPredicted RBP-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 COQ2Q96H96 371 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 TMEM175Q9BSA9 504 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 TRIM62Q9BVG3 475 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 CHID1Q9BWS9 393 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 PRO0628Q9UI54 55 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 HSPB8Q9UJY1 196 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 SNX12Q9UMY4 172 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 MGAT4BQ9UQ53 548 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 PIGLQ9Y2B2 252 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 STRAPQ9Y3F4 350 aaKnown RBP-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 USF3Q68DE3 2245 aa-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 DYNC1H1Q14204 4646 aaKnown RBP-2.71□□□□□ -2.84
RNU6-542P-201ENST00000516405 UTP20O75691 2785 aaKnown RBP-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 TRBV6-4A0A1B0GX49 114 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 COL6A5A8TX70 2615 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 ANKRD65E5RJM6 399 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 K7EQZ3 153 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 M0R3G1 203 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 KCNK1O00180 336 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 CPLX1O14810 134 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 CLDN9O95484 217 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 TGFAP01135 160 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 PTHP01270 115 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 CRYBA1P05813 215 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 RAB4AP20338 218 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 CD79BP40259 229 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 EIF3EP60228 445 aaKnown RBP-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 IMMTQ16891 758 aaKnown RBP-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 ATP6AP1LQ52LC2 224 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 RIPPLY2Q5TAB7 128 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 HES3Q5TGS1 186 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 FAM27BQ5VT28 67 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 BLOC1S2Q6QNY1 142 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 TEX261Q6UWH6 196 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 RAB43Q86YS6 212 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 OR4D11Q8NGI4 311 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 MITD1Q8WV92 249 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 TFGQ92734 400 aaPredicted RBP-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 GTF2H4Q92759 462 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 PPWD1Q96BP3 646 aaKnown RBP-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 LRRC39Q96DD0 335 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 OLFM3Q96PB7 478 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 CCL19Q99731 98 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 C11orf49Q9H6J7 331 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 HRASLS2Q9NWW9 162 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 TNFSF18Q9UNG2 199 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 HS3ST2Q9Y278 367 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 TIMM9Q9Y5J7 89 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 U3KQ87 197 aa-2.72□□□□□ -2.84
RNU6-542P-201ENST00000516405 MAP2P11137 1827 aaKnown RBP-2.72□□□□□ -2.85
RNU6-542P-201ENST00000516405 ACACAQ13085 2346 aa-2.73□□□□□ -2.85
RNU6-542P-201ENST00000516405 MGAM2Q2M2H8 2515 aa-2.73□□□□□ -2.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms