RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 ZNF660Q6AZW8 331 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-236ENST00000498808 PYHIN1Q6K0P9 492 aa11.86□□□□□ -0.51
HDAC6-236ENST00000498808 CD200R1LQ6Q8B3 271 aa11.86□□□□□ -0.51
HDAC6-236ENST00000498808 ZNF497Q6ZNH5 498 aa11.86□□□□□ -0.51
HDAC6-236ENST00000498808 SERPINA12Q8IW75 414 aa11.86□□□□□ -0.51
HDAC6-236ENST00000498808 ODF3L1Q8IXM7 274 aa11.86□□□□□ -0.51
HDAC6-236ENST00000498808 RPP25LQ8N5L8 163 aaKnown RBP11.86□□□□□ -0.51
HDAC6-236ENST00000498808 PARP16Q8N5Y8 322 aa11.86□□□□□ -0.51
HDAC6-236ENST00000498808 OR51A2Q8NGJ7 313 aa11.86□□□□□ -0.51
HDAC6-236ENST00000498808 OR5D14Q8NGL3 314 aa11.86□□□□□ -0.51
HDAC6-236ENST00000498808 OR9G4Q8NGQ1 327 aa11.86□□□□□ -0.51
HDAC6-236ENST00000498808 FAM192AQ9GZU8 254 aa11.86□□□□□ -0.51
HDAC6-236ENST00000498808 CNOT2Q9NZN8 540 aaKnown RBP11.86□□□□□ -0.51
HDAC6-236ENST00000498808 AIPO00170 330 aa11.85□□□□□ -0.51
HDAC6-236ENST00000498808 GEMIN2O14893 280 aaKnown RBP11.85□□□□□ -0.51
HDAC6-236ENST00000498808 SLC16A6O15403 523 aa11.85□□□□□ -0.51
HDAC6-236ENST00000498808 CDRT1O95170 752 aa11.85□□□□□ -0.51
HDAC6-236ENST00000498808 HBZP02008 142 aa11.85□□□□□ -0.51
HDAC6-236ENST00000498808 CSTBP04080 98 aaKnown RBP11.85□□□□□ -0.51
HDAC6-236ENST00000498808 FSTP19883 344 aa11.85□□□□□ -0.51
HDAC6-236ENST00000498808 RBM11P57052 281 aaKnown RBP11.85□□□□□ -0.51
HDAC6-236ENST00000498808 ACTBL2Q562R1 376 aa11.85□□□□□ -0.51
HDAC6-236ENST00000498808 NHLRC3Q5JS37 347 aa11.85□□□□□ -0.51
HDAC6-236ENST00000498808 STEAP3Q658P3 488 aa11.85□□□□□ -0.51
HDAC6-236ENST00000498808 KCTD20Q7Z5Y7 419 aa11.85□□□□□ -0.51
HDAC6-236ENST00000498808 OR1L1Q8NH94 360 aa11.85□□□□□ -0.51
HDAC6-236ENST00000498808 TMEM106AQ96A25 262 aa11.85□□□□□ -0.51
HDAC6-236ENST00000498808 PELI1Q96FA3 418 aa11.85□□□□□ -0.51
HDAC6-236ENST00000498808 GPER1Q99527 375 aa11.85□□□□□ -0.51
HDAC6-236ENST00000498808 FAM103A1Q9BTL3 118 aaKnown RBP11.85□□□□□ -0.51
HDAC6-236ENST00000498808 ST6GALNAC5Q9BVH7 336 aa11.85□□□□□ -0.51
HDAC6-236ENST00000498808 FBXL15Q9H469 300 aa11.85□□□□□ -0.51
HDAC6-236ENST00000498808 ZNF446Q9NWS9 450 aa11.85□□□□□ -0.51
HDAC6-236ENST00000498808 GAB2Q9UQC2 676 aa11.85□□□□□ -0.51
HDAC6-236ENST00000498808 FCN1O00602 326 aa11.84□□□□□ -0.51
HDAC6-236ENST00000498808 SPINT2O43291 252 aa11.84□□□□□ -0.51
HDAC6-236ENST00000498808 HOXB6P17509 224 aaKnown RBP11.84□□□□□ -0.51
HDAC6-236ENST00000498808 ZP3P21754 424 aa11.84□□□□□ -0.51
HDAC6-236ENST00000498808 ADARB1P78563 741 aaKnown RBP11.84□□□□□ -0.51
HDAC6-236ENST00000498808 ALKBH1Q13686 389 aaKnown RBP11.84□□□□□ -0.51
HDAC6-236ENST00000498808 KLF5Q13887 457 aaPredicted RBP11.84□□□□□ -0.51
HDAC6-236ENST00000498808 TMEM30BQ3MIR4 351 aa11.84□□□□□ -0.51
HDAC6-236ENST00000498808 ATAD3CQ5T2N8 411 aa11.84□□□□□ -0.51
HDAC6-236ENST00000498808 LCN12Q6JVE5 192 aa11.84□□□□□ -0.51
HDAC6-236ENST00000498808 ZNF529Q6P280 563 aa11.84□□□□□ -0.51
HDAC6-236ENST00000498808 UNQ5815/PRO19632Q6UWF5 114 aa11.84□□□□□ -0.51
HDAC6-236ENST00000498808 PRR18Q8N4B5 295 aa11.84□□□□□ -0.51
HDAC6-236ENST00000498808 OR52N1Q8NH53 320 aa11.84□□□□□ -0.51
HDAC6-236ENST00000498808 NEK7Q8TDX7 302 aa11.84□□□□□ -0.51
HDAC6-236ENST00000498808 ABHD5Q8WTS1 349 aa11.84□□□□□ -0.51
HDAC6-236ENST00000498808 RANGRFQ9HD47 186 aaPredicted RBP11.84□□□□□ -0.51
HDAC6-236ENST00000498808 DCTN3O75935 186 aa11.83□□□□□ -0.52
HDAC6-236ENST00000498808 TMEM267Q0VDI3 215 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-236ENST00000498808 TMED1Q13445 227 aa11.83□□□□□ -0.52
HDAC6-236ENST00000498808 GNMTQ14749 295 aa11.83□□□□□ -0.52
HDAC6-236ENST00000498808 MORN2Q502X0 79 aa11.83□□□□□ -0.52
HDAC6-236ENST00000498808 AKIRIN2Q53H80 203 aa11.83□□□□□ -0.52
HDAC6-236ENST00000498808 SYT6Q5T7P8 510 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-236ENST00000498808 KDM4DQ6B0I6 523 aa11.83□□□□□ -0.52
HDAC6-236ENST00000498808 PPP1R27Q86WC6 154 aa11.83□□□□□ -0.52
HDAC6-236ENST00000498808 Q8N402 240 aa11.83□□□□□ -0.52
HDAC6-236ENST00000498808 OR4K15Q8NH41 348 aa11.83□□□□□ -0.52
HDAC6-236ENST00000498808 CPNE2Q96FN4 548 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-236ENST00000498808 ABHD14AQ9BUJ0 271 aa11.83□□□□□ -0.52
HDAC6-236ENST00000498808 SLA2Q9H6Q3 261 aa11.83□□□□□ -0.52
HDAC6-236ENST00000498808 FAM53CQ9NYF3 392 aa11.83□□□□□ -0.52
HDAC6-236ENST00000498808 IL36GQ9NZH8 169 aa11.83□□□□□ -0.52
HDAC6-236ENST00000498808 ADAM30Q9UKF2 790 aa11.83□□□□□ -0.52
HDAC6-236ENST00000498808 DHDHQ9UQ10 334 aa11.83□□□□□ -0.52
HDAC6-236ENST00000498808 ARL2BPQ9Y2Y0 163 aa11.83□□□□□ -0.52
HDAC6-236ENST00000498808 J3QRE1 110 aa11.82□□□□□ -0.52
HDAC6-236ENST00000498808 RRHO14718 337 aa11.82□□□□□ -0.52
HDAC6-236ENST00000498808 TRGV3P03979 118 aa11.82□□□□□ -0.52
HDAC6-236ENST00000498808 CSN3P07498 182 aa11.82□□□□□ -0.52
HDAC6-236ENST00000498808 SNRPBP14678 240 aaKnown RBP11.82□□□□□ -0.52
HDAC6-236ENST00000498808 RAB3AP20336 220 aa11.82□□□□□ -0.52
HDAC6-236ENST00000498808 POLR2IP36954 125 aaKnown RBP11.82□□□□□ -0.52
HDAC6-236ENST00000498808 SYNJ2BPP57105 145 aa11.82□□□□□ -0.52
HDAC6-236ENST00000498808 CD81P60033 236 aa11.82□□□□□ -0.52
HDAC6-236ENST00000498808 MPV17LQ2QL34 196 aa11.82□□□□□ -0.52
HDAC6-236ENST00000498808 ZNF833PQ6ZTB9 187 aa11.82□□□□□ -0.52
HDAC6-236ENST00000498808 LFNGQ8NES3 379 aa11.82□□□□□ -0.52
HDAC6-236ENST00000498808 NSL1Q96IY1 281 aa11.82□□□□□ -0.52
HDAC6-236ENST00000498808 C4orf36Q96KX1 117 aa11.82□□□□□ -0.52
HDAC6-236ENST00000498808 RDH12Q96NR8 316 aa11.82□□□□□ -0.52
HDAC6-236ENST00000498808 WFDC10AQ9H1F0 79 aa11.82□□□□□ -0.52
HDAC6-236ENST00000498808 TRAPPC2LQ9UL33 140 aa11.82□□□□□ -0.52
HDAC6-236ENST00000498808 RNF150Q9ULK6 438 aa11.82□□□□□ -0.52
HDAC6-236ENST00000498808 A0A1W2PP11 408 aa11.81□□□□□ -0.52
HDAC6-236ENST00000498808 DAPL1A0PJW8 107 aa11.81□□□□□ -0.52
HDAC6-236ENST00000498808 ANKRD34BA5PLL1 514 aa11.81□□□□□ -0.52
HDAC6-236ENST00000498808 J3QLW9 94 aa11.81□□□□□ -0.52
HDAC6-236ENST00000498808 ZNF19P17023 458 aa11.81□□□□□ -0.52
HDAC6-236ENST00000498808 RCC1P18754 421 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-236ENST00000498808 SERPINA2P20848 420 aa11.81□□□□□ -0.52
HDAC6-236ENST00000498808 OR3A3P47888 321 aa11.81□□□□□ -0.52
HDAC6-236ENST00000498808 MECP2P51608 486 aaKnown RBP11.81□□□□□ -0.52
HDAC6-236ENST00000498808 PMS2P11Q13670 270 aa11.81□□□□□ -0.52
HDAC6-236ENST00000498808 HSP90B2PQ58FF3 399 aa11.81□□□□□ -0.52
HDAC6-236ENST00000498808 C6orf183Q5T699 404 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms